version 1.0
Shewanella putrefaciens CN-32, complete genome - 1..4659220 3972 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3759 43.76 0 4397090..4398067 + 325 146294870 - Sputcn32_3788 - cytochrome oxidase assembly 3760 47.02 0 4398082..4398987 + 301 146294871 - Sputcn32_3789 - protoheme IX farnesyltransferase 3761 42.02 0 4398992..4399624 + 210 146294872 - Sputcn32_3790 - electron transport protein SCO1/SenC 3762 46.23 0 4399625..4400671 - 348 146294873 - Sputcn32_3791 - polysaccharide deacetylase 3763 46.68 0 4400694..4402064 + 456 146294874 - Sputcn32_3792 - MATE efflux family protein 3764 34.12 -2 4402789..4403928 + 379 146294875 - Sputcn32_3793 - hypothetical protein 3765 44.91 0 4404194..4404772 - 192 146294876 - Sputcn32_3794 - putative DNA uptake protein 3766 42.88 0 4405012..4406760 - 582 146294877 - Sputcn32_3795 - flavocytochrome c 3767 34.25 -2 4406853..4407617 - 254 146294878 - Sputcn32_3796 - hypothetical protein 3768 40.90 -1 4407797..4409038 - 413 146294879 - Sputcn32_3797 - ATPase domain-containing protein 3769 47.20 0 4409025..4409702 - 225 146294880 - Sputcn32_3798 - two component transcriptional regulator 3770 40.03 -1 4409705..4410451 - 248 146294881 - Sputcn32_3799 - response regulator receiver protein 3771 49.05 +1 4410619..4411407 - 262 146294882 - Sputcn32_3800 - competence protein ComF 3772 47.44 0 4411511..4412233 + 240 146294883 - Sputcn32_3801 - bioH protein 3773 45.70 0 4412295..4412852 + 185 146294884 - Sputcn32_3802 - hypothetical protein 3774 43.31 0 4412916..4414880 - 654 146294885 - Sputcn32_3803 - sulfatase 3775 46.97 0 4415097..4417538 - 813 146294886 - Sputcn32_3804 - RNA-binding S1 domain-containing protein 3776 44.35 0 4417626..4417970 - 114 146294887 - Sputcn32_3805 - GreA/GreB family elongation factor 3777 40.63 -1 4418126..4419427 + 433 146294888 - Sputcn32_3806 - phage integrase family protein 3778 44.44 0 4419424..4423725 + 1433 146294889 - Sputcn32_3807 - phage integrase family protein 3779 43.00 0 4423727..4424347 + 206 146294890 - Sputcn32_3808 - hypothetical protein 3780 41.82 0 4424368..4424850 + 160 146294891 - Sputcn32_3809 - transcription elongation factor GreB 3781 35.73 -2 4425513..4425887 + 124 146294892 - Sputcn32_3810 - hypothetical protein 3782 49.17 +1 4426905..4427384 - 159 146294893 - Sputcn32_3812 - ISSod10, transposase OrfA 3783 40.00 -1 4427659..4427973 - 104 146294894 - Sputcn32_3813 - hypothetical protein 3784 49.39 +1 4428071..4429309 - 412 146294895 - Sputcn32_3814 - major facilitator transporter 3785 50.84 +1 4429333..4430343 - 336 146294896 - Sputcn32_3815 - glyceraldehyde-3-phosphate dehydrogenase 3786 49.80 +1 4430418..4430909 - 163 146294897 - Sputcn32_3816 - dual specificity protein phosphatase 3787 44.73 0 4430916..4431152 - 78 146294898 - Sputcn32_3817 - redox-active disulfide protein 2 3788 48.85 +1 4431163..4432161 - 332 146294899 - Sputcn32_3818 - permease 3789 48.13 0 4432258..4432764 - 168 146294900 - Sputcn32_3819 - protein tyrosine phosphatase 3790 45.98 0 4432843..4433190 - 115 146294901 - Sputcn32_3820 - regulatory protein, ArsR 3791 40.05 -1 4433183..4433599 - 138 146294902 - Sputcn32_3821 - protein tyrosine phosphatase 3792 46.53 0 4433695..4433982 - 95 146294903 - Sputcn32_3822 - regulatory protein, ArsR 3793 48.47 +1 4434227..4435303 + 358 146294904 - Sputcn32_3823 - permease 3794 48.25 0 4435433..4436887 + 484 146294905 - Sputcn32_3824 - glutathione synthase 3795 45.67 0 4436958..4437662 - 234 146294906 - Sputcn32_3825 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 3796 45.38 0 4437674..4440238 - 854 146294907 - Sputcn32_3826 - molybdopterin oxidoreductase 3797 49.59 +1 4440603..4440965 + 120 146294908 - Sputcn32_3827 - arsenical resistance operon trans-acting repressor ArsD 3798 50.08 +1 4440988..4442754 + 588 146294909 - Sputcn32_3828 - arsenite-activated ATPase ArsA 3799 50.78 +1 4442825..4444108 + 427 146294910 - Sputcn32_3829 - arsenical pump membrane protein 3800 47.17 0 4444229..4444705 + 158 146294911 - Sputcn32_3830 - arsenate reductase 3801 44.39 0 4444819..4447893 - 1024 146294912 - Sputcn32_3831 - acriflavin resistance protein 3802 41.60 0 4447890..4449014 - 374 146294913 - Sputcn32_3832 - RND family efflux transporter MFP subunit 3803 45.21 0 4449059..4449757 - 232 146294914 - Sputcn32_3833 - cytochrome c biogenesis protein, transmembrane region 3804 44.19 0 4449750..4450283 - 177 146294915 - Sputcn32_3834 - hypothetical protein 3805 44.44 0 4450302..4450544 - 80 146294916 - Sputcn32_3835 - redox-active disulfide protein 2 3806 38.19 -1 4450605..4450913 - 102 146294917 - Sputcn32_3836 - regulatory protein, ArsR 3807 46.38 0 4451424..4451630 - 68 146294918 - Sputcn32_3837 - helix-turn-helix domain-containing protein 3808 38.33 -1 4451763..4452302 + 179 146294919 - Sputcn32_3838 - hypothetical protein 3809 41.81 0 4452307..4453722 + 471 146294920 - Sputcn32_3839 - type III restriction enzyme, res subunit 3810 38.07 -1 4453964..4456012 - 682 146294921 - Sputcn32_3840 - hypothetical protein 3811 44.36 0 4456449..4457282 - 277 146294922 - Sputcn32_3841 - integrase catalytic subunit 3812 44.23 0 4457321..4457632 - 103 146294923 - Sputcn32_3842 - transposase IS3/IS911 family protein 3813 39.91 -1 4457833..4458744 - 303 146294924 - Sputcn32_3843 - hypothetical protein 3814 38.10 -1 4459039..4462101 - 1020 146294925 - Sputcn32_3844 - type III restriction enzyme, res subunit 3815 39.80 -1 4462348..4462548 - 66 146294926 - Sputcn32_3845 - GreA/GreB family elongation factor 3816 50.41 +1 4462925..4463650 + 241 146294927 ompR Sputcn32_3846 - osmolarity response regulator 3817 46.55 0 4463693..4465009 + 438 146294928 envZ Sputcn32_3847 - osmolarity sensor protein 3818 46.24 0 4465138..4467120 + 660 146294929 - Sputcn32_3848 - methyl-accepting chemotaxis sensory transducer 3819 46.62 0 4467201..4467674 - 157 146294930 - Sputcn32_3849 - redoxin domain-containing protein 3820 45.50 0 4467756..4468700 - 314 146294931 - Sputcn32_3850 - hypothetical protein 3821 47.85 0 4469105..4469407 + 100 146294932 - Sputcn32_3851 - peptidase 3822 42.67 0 4469410..4470105 + 231 146294933 - Sputcn32_3852 - two component transcriptional regulator 3823 44.25 0 4470098..4471462 + 454 146294934 - Sputcn32_3853 - integral membrane sensor signal transduction histidine kinase 3824 47.18 0 4471602..4473074 + 490 146294935 - Sputcn32_3854 - hypothetical protein 3825 45.70 0 4473140..4473616 - 158 146294936 - Sputcn32_3855 - hypothetical protein 3826 44.23 0 4473695..4477345 - 1216 146294937 - Sputcn32_3856 - diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) 3827 40.51 -1 4477746..4478135 + 129 146294938 - Sputcn32_3857 - hypothetical protein 3828 50.00 +1 4478325..4479368 + 347 146294939 - Sputcn32_3858 - ubiquinol oxidase, subunit II 3829 48.08 0 4479371..4481350 + 659 146294940 - Sputcn32_3859 - cytochrome-c oxidase 3830 48.15 0 4481352..4481972 + 206 146294941 - Sputcn32_3860 - cytochrome c oxidase, subunit III 3831 45.91 0 4481972..4482313 + 113 146294942 - Sputcn32_3861 - cytochrome C oxidase subunit IV 3832 48.63 +1 4482327..4483274 + 315 146294943 - Sputcn32_3862 - protoheme IX farnesyltransferase 3833 43.82 0 4483413..4485614 - 733 146294944 - Sputcn32_3863 - TonB-dependent siderophore receptor 3834 62.30 +2 4485824..4487221 - 465 146294945 - Sputcn32_3864 - amino acid permease-associated region 3835 66.11 +2 4487231..4488133 - 300 146294946 - Sputcn32_3865 - homocysteine S-methyltransferase 3836 47.39 0 4488502..4490031 - 509 146294947 - Sputcn32_3866 - XRE family transcriptional regulator 3837 46.10 0 4490285..4490848 + 187 146294948 - Sputcn32_3867 - malate synthase 3838 46.90 0 4491134..4492084 + 316 146294949 - Sputcn32_3868 - hypothetical protein 3839 50.33 +1 4492105..4492257 - 50 146294950 - Sputcn32_3869 - hypothetical protein 3840 46.15 0 4492500..4493123 - 207 146294951 - Sputcn32_3870 - paraquat-inducible protein A 3841 41.65 0 4493228..4494418 - 396 146294952 - Sputcn32_3871 - metal dependent phosphohydrolase 3842 45.66 0 4494683..4496029 - 448 146294953 - Sputcn32_3872 - ABC transporter related 3843 46.14 0 4496663..4498021 + 452 146294954 - Sputcn32_3873 - isochorismate synthase 3844 42.04 0 4498055..4498789 - 244 146294955 - Sputcn32_3874 - hypothetical protein 3845 44.24 0 4499030..4499689 + 219 146294956 - Sputcn32_3875 - hypothetical protein 3846 39.00 -1 4499789..4500247 + 152 146294957 - Sputcn32_3876 - acetyltransferase 3847 43.79 0 4500476..4502599 - 707 146294958 - Sputcn32_3877 - integral membrane sensor signal transduction histidine kinase 3848 46.82 0 4502601..4504031 - 476 146294959 - Sputcn32_3878 - two component, sigma54 specific, Fis family transcriptional regulator 3849 43.27 0 4504270..4505094 + 274 146294960 - Sputcn32_3879 - extracellular solute-binding protein 3850 50.85 +1 4505091..4505798 + 235 146294961 - Sputcn32_3880 - binding-protein-dependent transport systems inner membrane component 3851 43.74 0 4505802..4506512 + 236 146294962 - Sputcn32_3881 - ABC transporter related 3852 46.60 0 4506496..4507083 + 195 146294963 - Sputcn32_3882 - molybdopterin-guanine dinucleotide biosynthesis protein A 3853 47.72 0 4507117..4508916 + 599 146294964 - Sputcn32_3883 - molybdopterin-guanine dinucleotide biosynthesis protein B 3854 45.63 0 4508933..4509916 + 327 146294965 - Sputcn32_3884 - molybdenum cofactor biosynthesis protein A 3855 40.65 -1 4510003..4510467 + 154 146294966 - Sputcn32_3885 - hypothetical protein 3856 45.83 0 4510500..4511315 + 271 146294967 - Sputcn32_3886 - formamidopyrimidine-DNA glycosylase 3857 44.85 0 4511376..4512851 - 491 146294968 - Sputcn32_3887 - hypothetical protein 3858 42.89 0 4512942..4513433 - 163 146294969 coaD Sputcn32_3888 - phosphopantetheine adenylyltransferase 44.78 MEAN 3.68 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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