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Shewanella putrefaciens CN-32, complete genome - 1..4659220 3972 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3721 41.37 0 4356950..4357198 - 82 146294832 - Sputcn32_3750 - ribosomal protein S17 3722 47.40 0 4357198..4357389 - 63 146294833 - Sputcn32_3751 - 50S ribosomal protein L29 3723 46.72 0 4357389..4357799 - 136 146294834 rplP Sputcn32_3752 - 50S ribosomal protein L16 3724 46.61 0 4357811..4358503 - 230 146294835 rpsC Sputcn32_3753 - 30S ribosomal protein S3 3725 48.65 +1 4358513..4358845 - 110 146294836 rplV Sputcn32_3754 - 50S ribosomal protein L22 3726 46.59 0 4358861..4359139 - 92 146294837 rpsS Sputcn32_3755 - 30S ribosomal protein S19 3727 49.09 +1 4359154..4359978 - 274 146294838 rplB Sputcn32_3756 - 50S ribosomal protein L2 3728 45.75 0 4359995..4360300 - 101 146294839 rplW Sputcn32_3757 - 50S ribosomal protein L23 3729 47.36 0 4360297..4360902 - 201 146294840 rplD Sputcn32_3758 - 50S ribosomal protein L4 3730 46.48 0 4360920..4361558 - 212 146294841 rplC Sputcn32_3759 - 50S ribosomal protein L3 3731 44.87 0 4361586..4361897 - 103 146294842 rpsJ Sputcn32_3760 - 30S ribosomal protein S10 3732 48.27 0 4362232..4363416 - 394 146294843 - Sputcn32_3761 - elongation factor Tu 3733 45.78 0 4363489..4365585 - 698 146294844 - Sputcn32_3762 - elongation factor G 3734 46.07 0 4365664..4366134 - 156 146294845 - Sputcn32_3763 - 30S ribosomal protein S7 3735 50.13 +1 4366215..4366589 - 124 146294846 rpsL Sputcn32_3764 - 30S ribosomal protein S12 3736 47.84 0 4366769..4370986 - 1405 146294847 - Sputcn32_3765 - DNA-directed RNA polymerase subunit beta' 3737 46.53 0 4371070..4375101 - 1343 146294848 - Sputcn32_3766 - DNA-directed RNA polymerase, beta subunit 3738 44.44 0 4375342..4375710 - 122 146294849 rplL Sputcn32_3767 - 50S ribosomal protein L7/L12 3739 47.50 0 4375765..4376265 - 166 146294850 rplJ Sputcn32_3768 - 50S ribosomal protein L10 3740 44.02 0 4376532..4377233 - 233 146294851 rplA Sputcn32_3769 - 50S ribosomal protein L1 3741 44.29 0 4377238..4377666 - 142 146294852 rplK Sputcn32_3770 - 50S ribosomal protein L11 3742 46.01 0 4377794..4378345 - 183 146294853 - Sputcn32_3771 - NusG antitermination factor 3743 43.55 0 4378355..4378726 - 123 146294854 secE Sputcn32_3772 - preprotein translocase subunit SecE 3744 48.19 0 4379002..4380186 - 394 146294855 - Sputcn32_3773 - elongation factor Tu 3745 41.85 0 4380899..4381849 + 316 146294856 - Sputcn32_3774 - pantothenate kinase 3746 43.02 0 4381860..4382819 - 319 146294857 - Sputcn32_3775 - biotin--protein ligase 3747 43.86 0 4382812..4383837 - 341 146294858 - Sputcn32_3776 - UDP-N-acetylenolpyruvoylglucosamine reductase 3748 43.53 0 4384096..4385262 + 388 146294859 - Sputcn32_3777 - ribonuclease T2 3749 45.03 0 4385353..4386609 - 418 146294860 - Sputcn32_3778 - aromatic amino acid transporter 3750 43.48 0 4386609..4389032 - 807 146294861 - Sputcn32_3779 - glycerol-3-phosphate acyltransferase 3751 44.44 0 4389382..4390002 + 206 146294862 - Sputcn32_3780 - LexA repressor 3752 47.17 0 4389999..4390511 + 170 146294863 - Sputcn32_3781 - hypothetical protein 3753 45.81 0 4390907..4392445 + 512 146294864 - Sputcn32_3782 - cytochrome c oxidase, subunit II 3754 45.70 0 4392455..4394047 + 530 146294865 - Sputcn32_3783 - cytochrome-c oxidase 3755 47.97 0 4394049..4394615 + 188 146294866 - Sputcn32_3784 - cytochrome C oxidase assembly protein 3756 44.75 0 4394612..4395487 + 291 146294867 - Sputcn32_3785 - cytochrome c oxidase, subunit III 3757 44.71 0 4395712..4396467 + 251 146294868 - Sputcn32_3786 - hypothetical protein 3758 45.05 0 4396545..4397090 + 181 146294869 - Sputcn32_3787 - hypothetical protein 3759 43.76 0 4397090..4398067 + 325 146294870 - Sputcn32_3788 - cytochrome oxidase assembly 3760 47.02 0 4398082..4398987 + 301 146294871 - Sputcn32_3789 - protoheme IX farnesyltransferase 3761 42.02 0 4398992..4399624 + 210 146294872 - Sputcn32_3790 - electron transport protein SCO1/SenC 3762 46.23 0 4399625..4400671 - 348 146294873 - Sputcn32_3791 - polysaccharide deacetylase 3763 46.68 0 4400694..4402064 + 456 146294874 - Sputcn32_3792 - MATE efflux family protein 3764 34.12 -2 4402789..4403928 + 379 146294875 - Sputcn32_3793 - hypothetical protein 3765 44.91 0 4404194..4404772 - 192 146294876 - Sputcn32_3794 - putative DNA uptake protein 3766 42.88 0 4405012..4406760 - 582 146294877 - Sputcn32_3795 - flavocytochrome c 3767 34.25 -2 4406853..4407617 - 254 146294878 - Sputcn32_3796 - hypothetical protein 3768 40.90 -1 4407797..4409038 - 413 146294879 - Sputcn32_3797 - ATPase domain-containing protein 3769 47.20 0 4409025..4409702 - 225 146294880 - Sputcn32_3798 - two component transcriptional regulator 3770 40.03 -1 4409705..4410451 - 248 146294881 - Sputcn32_3799 - response regulator receiver protein 3771 49.05 +1 4410619..4411407 - 262 146294882 - Sputcn32_3800 - competence protein ComF 3772 47.44 0 4411511..4412233 + 240 146294883 - Sputcn32_3801 - bioH protein 3773 45.70 0 4412295..4412852 + 185 146294884 - Sputcn32_3802 - hypothetical protein 3774 43.31 0 4412916..4414880 - 654 146294885 - Sputcn32_3803 - sulfatase 3775 46.97 0 4415097..4417538 - 813 146294886 - Sputcn32_3804 - RNA-binding S1 domain-containing protein 3776 44.35 0 4417626..4417970 - 114 146294887 - Sputcn32_3805 - GreA/GreB family elongation factor 3777 40.63 -1 4418126..4419427 + 433 146294888 - Sputcn32_3806 - phage integrase family protein 3778 44.44 0 4419424..4423725 + 1433 146294889 - Sputcn32_3807 - phage integrase family protein 3779 43.00 0 4423727..4424347 + 206 146294890 - Sputcn32_3808 - hypothetical protein 3780 41.82 0 4424368..4424850 + 160 146294891 - Sputcn32_3809 - transcription elongation factor GreB 3781 35.73 -2 4425513..4425887 + 124 146294892 - Sputcn32_3810 - hypothetical protein 3782 49.17 +1 4426905..4427384 - 159 146294893 - Sputcn32_3812 - ISSod10, transposase OrfA 3783 40.00 -1 4427659..4427973 - 104 146294894 - Sputcn32_3813 - hypothetical protein 3784 49.39 +1 4428071..4429309 - 412 146294895 - Sputcn32_3814 - major facilitator transporter 3785 50.84 +1 4429333..4430343 - 336 146294896 - Sputcn32_3815 - glyceraldehyde-3-phosphate dehydrogenase 3786 49.80 +1 4430418..4430909 - 163 146294897 - Sputcn32_3816 - dual specificity protein phosphatase 3787 44.73 0 4430916..4431152 - 78 146294898 - Sputcn32_3817 - redox-active disulfide protein 2 3788 48.85 +1 4431163..4432161 - 332 146294899 - Sputcn32_3818 - permease 3789 48.13 0 4432258..4432764 - 168 146294900 - Sputcn32_3819 - protein tyrosine phosphatase 3790 45.98 0 4432843..4433190 - 115 146294901 - Sputcn32_3820 - regulatory protein, ArsR 3791 40.05 -1 4433183..4433599 - 138 146294902 - Sputcn32_3821 - protein tyrosine phosphatase 3792 46.53 0 4433695..4433982 - 95 146294903 - Sputcn32_3822 - regulatory protein, ArsR 3793 48.47 +1 4434227..4435303 + 358 146294904 - Sputcn32_3823 - permease 3794 48.25 0 4435433..4436887 + 484 146294905 - Sputcn32_3824 - glutathione synthase 3795 45.67 0 4436958..4437662 - 234 146294906 - Sputcn32_3825 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 3796 45.38 0 4437674..4440238 - 854 146294907 - Sputcn32_3826 - molybdopterin oxidoreductase 3797 49.59 +1 4440603..4440965 + 120 146294908 - Sputcn32_3827 - arsenical resistance operon trans-acting repressor ArsD 3798 50.08 +1 4440988..4442754 + 588 146294909 - Sputcn32_3828 - arsenite-activated ATPase ArsA 3799 50.78 +1 4442825..4444108 + 427 146294910 - Sputcn32_3829 - arsenical pump membrane protein 3800 47.17 0 4444229..4444705 + 158 146294911 - Sputcn32_3830 - arsenate reductase 3801 44.39 0 4444819..4447893 - 1024 146294912 - Sputcn32_3831 - acriflavin resistance protein 3802 41.60 0 4447890..4449014 - 374 146294913 - Sputcn32_3832 - RND family efflux transporter MFP subunit 3803 45.21 0 4449059..4449757 - 232 146294914 - Sputcn32_3833 - cytochrome c biogenesis protein, transmembrane region 3804 44.19 0 4449750..4450283 - 177 146294915 - Sputcn32_3834 - hypothetical protein 3805 44.44 0 4450302..4450544 - 80 146294916 - Sputcn32_3835 - redox-active disulfide protein 2 3806 38.19 -1 4450605..4450913 - 102 146294917 - Sputcn32_3836 - regulatory protein, ArsR 3807 46.38 0 4451424..4451630 - 68 146294918 - Sputcn32_3837 - helix-turn-helix domain-containing protein 3808 38.33 -1 4451763..4452302 + 179 146294919 - Sputcn32_3838 - hypothetical protein 3809 41.81 0 4452307..4453722 + 471 146294920 - Sputcn32_3839 - type III restriction enzyme, res subunit 3810 38.07 -1 4453964..4456012 - 682 146294921 - Sputcn32_3840 - hypothetical protein 3811 44.36 0 4456449..4457282 - 277 146294922 - Sputcn32_3841 - integrase catalytic subunit 3812 44.23 0 4457321..4457632 - 103 146294923 - Sputcn32_3842 - transposase IS3/IS911 family protein 3813 39.91 -1 4457833..4458744 - 303 146294924 - Sputcn32_3843 - hypothetical protein 3814 38.10 -1 4459039..4462101 - 1020 146294925 - Sputcn32_3844 - type III restriction enzyme, res subunit 3815 39.80 -1 4462348..4462548 - 66 146294926 - Sputcn32_3845 - GreA/GreB family elongation factor 3816 50.41 +1 4462925..4463650 + 241 146294927 ompR Sputcn32_3846 - osmolarity response regulator 3817 46.55 0 4463693..4465009 + 438 146294928 envZ Sputcn32_3847 - osmolarity sensor protein 3818 46.24 0 4465138..4467120 + 660 146294929 - Sputcn32_3848 - methyl-accepting chemotaxis sensory transducer 3819 46.62 0 4467201..4467674 - 157 146294930 - Sputcn32_3849 - redoxin domain-containing protein 3820 45.50 0 4467756..4468700 - 314 146294931 - Sputcn32_3850 - hypothetical protein 44.78 MEAN 3.68 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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