version 1.0
Shewanella putrefaciens CN-32, complete genome - 1..4659220 3972 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 311 43.10 0 337772..338713 + 313 146291422 - Sputcn32_0315 - polysulphide reductase, NrfD 312 43.06 0 338992..339423 - 143 146291423 - Sputcn32_0316 - AsnC family transcriptional regulator 313 46.48 0 339673..340935 + 420 146291424 - Sputcn32_0317 - inner membrane protein YjeH 314 44.44 0 340918..341376 - 152 146291425 - Sputcn32_0318 - hypothetical protein 315 46.52 0 341474..342004 - 176 146291426 - Sputcn32_0319 - hypothetical protein 316 42.80 0 342194..342901 + 235 146291427 - Sputcn32_0320 - hypothetical protein 317 45.70 0 342936..344390 + 484 146291428 - Sputcn32_0321 - Sel1 domain-containing protein 318 45.76 0 344400..344729 - 109 146291429 - Sputcn32_0322 - hypothetical protein 319 47.01 0 345092..346963 + 623 146291430 - Sputcn32_0323 - methyl-accepting chemotaxis sensory transducer 320 44.44 0 347066..348037 - 323 146291431 - Sputcn32_0324 - LysR family transcriptional regulator 321 46.65 0 348151..349359 + 402 146291432 - Sputcn32_0325 - Bcr/CflA subfamily drug resistance transporter 322 42.74 0 349483..350088 + 201 146291433 - Sputcn32_0326 - DTW domain-containing protein 323 43.14 0 350449..352569 - 706 146291434 - Sputcn32_0327 - diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) 324 38.98 -1 352876..353229 + 117 146291435 - Sputcn32_0328 - hypothetical protein 325 41.78 0 353300..353938 + 212 146291436 - Sputcn32_0329 - methyltransferase type 11 326 42.81 0 354269..356326 + 685 146291437 - Sputcn32_0330 - TonB-dependent receptor 327 45.22 0 356420..357403 - 327 146291438 - Sputcn32_0331 - formate dehydrogenase, gamma subunit 328 48.95 +1 357483..358052 - 189 146291439 - Sputcn32_0332 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 329 49.07 +1 358082..360934 - 950 146291440 - Sputcn32_0333 - molybdopterin oxidoreductase 330 53.73 +2 360952..361152 - 66 146291441 - Sputcn32_0334 - twin-arginine translocation pathway signal 331 46.36 0 361537..362565 - 342 146291442 - Sputcn32_0335 - formate dehydrogenase, gamma subunit 332 48.91 +1 362615..363211 - 198 146291443 - Sputcn32_0336 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 333 46.84 0 363238..366087 - 949 146291444 - Sputcn32_0337 - molybdopterin oxidoreductase 334 50.22 +1 366106..366336 - 76 146291445 - Sputcn32_0338 - hypothetical protein 335 48.08 0 366463..367140 - 225 146291446 - Sputcn32_0339 - cytoplasmic chaperone TorD family protein 336 46.21 0 367151..368812 - 553 146291447 - Sputcn32_0340 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 337 45.36 0 369000..369656 - 218 146291448 - Sputcn32_0341 - hypothetical protein 338 46.24 0 369656..370120 - 154 146291449 - Sputcn32_0342 - hypothetical protein 339 41.69 0 370426..371322 + 298 146291450 - Sputcn32_0343 - formate dehydrogenase, subunit FdhD 340 45.36 0 371385..372290 + 301 146291451 - Sputcn32_0344 - DNA binding domain-containing protein 341 40.74 -1 378641..379153 + 170 146291452 - Sputcn32_0345 - hypothetical protein 342 40.48 -1 379564..379773 + 69 146291453 - Sputcn32_0346 - hypothetical protein 343 45.80 0 380239..381642 + 467 146291454 - Sputcn32_0347 - anion transporter 344 47.98 0 381710..383218 + 502 146291455 - Sputcn32_0348 - tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit 345 43.95 0 383302..383979 - 225 146291456 - Sputcn32_0349 - response regulator receiver 346 40.65 -1 383969..385636 - 555 146291457 - Sputcn32_0350 - signal transduction histidine kinase regulating citrate/malate metabolism 347 47.54 0 385820..386185 - 121 146291458 - Sputcn32_0351 - fumarate reductase subunit D 348 44.53 0 386198..386581 - 127 146291459 - Sputcn32_0352 - fumarate reductase subunit C 349 45.07 0 386583..387323 - 246 146291460 - Sputcn32_0353 - fumarate reductase iron-sulfur subunit 350 48.25 0 387323..389098 - 591 146291461 - Sputcn32_0354 - fumarate reductase flavoprotein subunit 351 42.46 0 389401..389970 - 189 146291462 - Sputcn32_0355 - GCN5-related N-acetyltransferase 352 49.43 +1 389991..391307 - 438 146291463 - Sputcn32_0356 - integral membrane sensor signal transduction histidine kinase 353 51.82 +1 391312..391971 - 219 146291464 - Sputcn32_0357 - two component transcriptional regulator 354 52.43 +2 391971..392237 - 88 146291465 - Sputcn32_0358 - peptidase 355 51.77 +1 392230..392793 - 187 146291466 - Sputcn32_0359 - diheme cytochrome c 356 52.13 +1 392884..393330 - 148 146291467 - Sputcn32_0360 - cytochrome c-type protein Shp 357 49.66 +1 393384..393971 - 195 146291468 - Sputcn32_0361 - cytochrome B561 358 45.16 0 394188..394652 + 154 146291469 - Sputcn32_0362 - hypothetical protein 359 45.04 0 394733..395236 + 167 146291470 - Sputcn32_0363 - hypothetical protein 360 49.90 +1 395402..396922 - 506 146291471 - Sputcn32_0364 - aldehyde dehydrogenase 361 48.63 +1 397183..399084 + 633 146291472 - Sputcn32_0365 - Fis family GAF modulated sigma54 specific transcriptional regulator 362 43.33 0 399127..400476 - 449 146291473 - Sputcn32_0366 - integral membrane sensor signal transduction histidine kinase 363 44.69 0 400491..401177 - 228 146291474 - Sputcn32_0367 - two component transcriptional regulator 364 41.46 0 401444..401935 + 163 146291475 - Sputcn32_0368 - protein of unknown function, Spy-related 365 45.01 0 401986..402867 + 293 146291476 - Sputcn32_0369 - cation diffusion facilitator family transporter 366 41.77 0 402886..403347 + 153 146291477 - Sputcn32_0370 - hypothetical protein 367 48.90 +1 403434..404846 - 470 146291478 - Sputcn32_0371 - nitrogen metabolism transcriptional regulator, NtrC, Fis family 368 46.90 0 404884..405930 - 348 146291479 - Sputcn32_0372 - signal transduction histidine kinase, nitrogen specific, NtrB 369 40.74 -1 406052..406591 - 179 146291480 - Sputcn32_0373 - hypothetical protein 370 42.42 0 406777..407139 - 120 146291481 - Sputcn32_0374 - glutathione S-transferase-like protein 371 46.45 0 407300..407665 - 121 146291482 - Sputcn32_0375 - glutathione S-transferase domain-containing protein 372 46.75 0 407799..408491 - 230 146291483 - Sputcn32_0376 - ThiJ/PfpI domain-containing protein 373 47.84 0 408563..409720 - 385 146291484 - Sputcn32_0377 - iron-containing alcohol dehydrogenase 374 44.50 0 409863..410471 - 202 146291485 - Sputcn32_0378 - TetR family transcriptional regulator 375 44.23 0 410754..411065 - 103 146291486 - Sputcn32_0379 - hypothetical protein 376 46.01 0 411424..413379 + 651 146291487 - Sputcn32_0380 - methyl-accepting chemotaxis sensory transducer 377 46.41 0 413512..415629 - 705 146291488 - Sputcn32_0381 - hypothetical protein 378 43.43 0 415995..416390 + 131 146291489 - Sputcn32_0382 - hypothetical protein 379 47.95 0 416767..417621 + 284 146291490 - Sputcn32_0383 - ribokinase-like domain-containing protein 380 40.79 -1 417926..419386 + 486 146291491 - Sputcn32_0384 - diguanylate cyclase 381 44.54 0 419515..420210 + 231 146291492 - Sputcn32_0385 - MOSC domain-containing protein 382 40.06 -1 420247..420603 + 118 146291493 - Sputcn32_0386 - hypothetical protein 383 47.05 0 420671..422587 - 638 146291494 - Sputcn32_0387 - methyl-accepting chemotaxis sensory transducer 384 48.06 0 422933..424582 - 549 146291495 - Sputcn32_0388 - electron-transferring-flavoprotein dehydrogenase 385 45.36 0 424919..425932 + 337 146291496 moaA Sputcn32_0389 - molybdenum cofactor biosynthesis protein A 386 49.06 +1 426030..426506 + 158 146291497 moaC Sputcn32_0390 - molybdenum cofactor biosynthesis protein C 387 46.03 0 426530..426781 + 83 146291498 - Sputcn32_0391 - molybdopterin converting factor, subunit 1 388 50.00 +1 426783..427244 + 153 146291499 - Sputcn32_0392 - molybdopterin biosynthesis MoaE 389 45.26 0 427301..428113 + 270 146291500 - Sputcn32_0393 - molybdenum ABC transporter, periplasmic molybdate-binding protein 390 48.39 0 428110..428793 + 227 146291501 - Sputcn32_0394 - molybdate ABC transporter, inner membrane subunit 391 48.73 +1 428774..429877 + 367 146291502 - Sputcn32_0395 - ABC transporter related 392 41.19 0 430094..430615 + 173 146291503 - Sputcn32_0396 - hypothetical protein 393 45.28 0 430657..431334 + 225 146291504 - Sputcn32_0397 - two component transcriptional regulator 394 46.22 0 431384..432640 + 418 146291505 - Sputcn32_0398 - integral membrane sensor signal transduction histidine kinase 395 45.51 0 432674..433363 + 229 146291506 - Sputcn32_0399 - pseudouridine synthase Rlu family protein 396 40.48 -1 433484..433651 + 55 146291507 - Sputcn32_0400 - hypothetical protein 397 44.15 0 433725..435896 - 723 146291508 - Sputcn32_0401 - TonB-dependent receptor 398 41.21 0 436216..436380 + 54 146291509 - Sputcn32_0402 - hypothetical protein 399 43.66 0 436397..436909 - 170 146291510 - Sputcn32_0403 - peptidase M23B 400 42.14 0 436949..437527 - 192 146291511 - Sputcn32_0404 - hypothetical protein 401 42.13 0 437533..438180 - 215 146291512 - Sputcn32_0405 - CHAP domain-containing protein 402 45.29 0 438489..439667 + 392 146291513 - Sputcn32_0406 - hypothetical protein 403 44.21 0 439672..440793 + 373 146291514 - Sputcn32_0407 - aminotransferase, class V 404 52.78 +2 440882..441205 - 107 146291515 - Sputcn32_0408 - hypothetical protein 405 47.18 0 441571..441765 + 64 146291516 - Sputcn32_0409 - hypothetical protein 406 50.06 +1 441963..442835 + 290 146291517 - Sputcn32_0410 - hypothetical protein 407 49.03 +1 443018..443890 + 290 146291518 - Sputcn32_0411 - hypothetical protein 408 47.73 0 444209..445618 - 469 146291519 glnA Sputcn32_0412 - glutamine synthetase 409 47.57 0 446653..448464 + 603 146291520 - Sputcn32_0413 - GTP-binding protein TypA 410 45.24 0 448536..449576 - 346 146291521 - Sputcn32_0414 - diguanylate cyclase 44.78 MEAN 3.68 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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