version 1.0
Shewanella putrefaciens CN-32, complete genome - 1..4659220 3972 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3473 49.15 +1 4065569..4066510 + 313 146294584 - Sputcn32_3500 - LysR family transcriptional regulator 3474 44.83 0 4066507..4067376 - 289 146294585 - Sputcn32_3501 - patatin 3475 42.27 0 4067508..4068536 - 342 146294586 - Sputcn32_3502 - LysR family transcriptional regulator 3476 46.63 0 4068604..4070604 + 666 146294587 - Sputcn32_3503 - enterobactin receptor protein 3477 45.33 0 4070658..4071599 - 313 146294588 - Sputcn32_3504 - hypothetical protein 3478 47.86 0 4071646..4071879 - 77 146294589 - Sputcn32_3505 - hypothetical protein 3479 44.25 0 4071993..4073330 - 445 146294590 - Sputcn32_3506 - coproporphyrinogen III oxidase 3480 42.29 0 4073705..4074631 + 308 146294591 - Sputcn32_3507 - bile acid:sodium symporter 3481 41.34 0 4081070..4081531 + 153 146294592 - Sputcn32_3508 - RNP-1 like RNA-binding protein 3482 43.12 0 4081553..4082359 - 268 146294593 - Sputcn32_3509 - glutamate racemase 3483 43.05 0 4082595..4083695 + 366 146294594 - Sputcn32_3510 - tRNA (uracil-5-)-methyltransferase 3484 37.69 -1 4084088..4085671 - 527 146294595 - Sputcn32_3511 - transposase 3485 41.14 0 4086196..4087656 + 486 146294596 - Sputcn32_3512 - hypothetical protein 3486 43.50 0 4087970..4088638 + 222 146294597 - Sputcn32_3513 - transposase 3487 46.26 0 4088825..4089118 - 97 146294598 - Sputcn32_3514 - plasmid stabilization system protein 3488 49.12 +1 4089106..4089390 - 94 146294599 - Sputcn32_3515 - CopG family transcriptional regulator 3489 50.62 +1 4089677..4090399 - 240 146294600 - Sputcn32_3516 - retinol acyltransferase domain-containing protein 3490 46.91 0 4090545..4091111 - 188 146294601 - Sputcn32_3517 - phage integrase family protein 3491 45.65 0 4091228..4091641 - 137 146294602 - Sputcn32_3518 - hypothetical protein 3492 49.33 +1 4091846..4092220 - 124 146294603 - Sputcn32_3519 - hypothetical protein 3493 48.21 0 4092360..4092722 - 120 146294604 - Sputcn32_3520 - hypothetical protein 3494 50.69 +1 4092763..4093269 - 168 146294605 - Sputcn32_3521 - DNA repair protein RadC 3495 43.94 0 4093402..4093599 + 65 146294606 - Sputcn32_3522 - phage transcriptional regulator, AlpA 3496 42.90 0 4094178..4097291 + 1037 146294607 - Sputcn32_3523 - hypothetical protein 3497 43.82 0 4097340..4098989 + 549 146294608 - Sputcn32_3524 - N-6 DNA methylase 3498 41.73 0 4098979..4100241 + 420 146294609 - Sputcn32_3525 - restriction modification system DNA specificity subunit 3499 41.22 0 4100238..4100795 + 185 146294610 - Sputcn32_3526 - hypothetical protein 3500 39.78 -1 4100798..4101634 + 278 146294611 - Sputcn32_3527 - hypothetical protein 3501 45.07 0 4101638..4102276 + 212 146294612 - Sputcn32_3528 - hypothetical protein 3502 43.13 0 4102290..4103330 + 346 146294613 - Sputcn32_3529 - appr-1-p processing domain-containing protein 3503 49.03 +1 4103478..4104458 - 326 146294614 - Sputcn32_3530 - alcohol dehydrogenase 3504 37.85 -1 4104548..4105255 - 235 146294615 - Sputcn32_3531 - TetR family transcriptional regulator 3505 40.25 -1 4105327..4106193 + 288 146294616 - Sputcn32_3532 - LysR family transcriptional regulator 3506 44.33 0 4106474..4107601 - 375 146294617 - Sputcn32_3533 - hypothetical protein 3507 44.18 0 4107695..4108939 - 414 146294618 - Sputcn32_3534 - hypothetical protein 3508 38.61 -1 4109328..4109687 - 119 146294619 - Sputcn32_3535 - tetraheme cytochrome c 3509 44.12 0 4109716..4111236 - 506 146294620 - Sputcn32_3536 - flavocytochrome c 3510 38.89 -1 4111579..4111902 - 107 146294621 - Sputcn32_3537 - hypothetical protein 3511 44.24 0 4112422..4112742 + 106 146294622 - Sputcn32_3538 - XRE family transcriptional regulator 3512 41.87 0 4113074..4113436 + 120 146294623 - Sputcn32_3539 - hypothetical protein 3513 43.15 0 4113779..4115041 - 420 146294624 - Sputcn32_3540 - phage integrase family protein 3514 49.11 +1 4115321..4115935 - 204 146294625 - Sputcn32_3541 - DNA-binding transcriptional repressor FabR 3515 43.27 0 4116080..4117186 + 368 146294626 - Sputcn32_3542 - stearoyl-CoA 9-desaturase 3516 47.59 0 4117282..4118340 + 352 146294627 - Sputcn32_3543 - selenide, water dikinase 3517 45.32 0 4118340..4119449 + 369 146294628 - Sputcn32_3544 - tRNA 2-selenouridine synthase 3518 45.46 0 4119504..4121366 - 620 146294629 - Sputcn32_3545 - phospholipid/glycerol acyltransferase 3519 46.24 0 4121357..4121968 - 203 146294630 - Sputcn32_3546 - TetR family transcriptional regulator 3520 46.17 0 4122286..4122729 - 147 146294631 - Sputcn32_3547 - GCN5-related N-acetyltransferase 3521 47.97 0 4122737..4123549 - 270 146294632 - Sputcn32_3548 - 3'(2'),5'-bisphosphate nucleotidase 3522 43.12 0 4123621..4124172 - 183 146294633 nudE Sputcn32_3549 - ADP-ribose diphosphatase NudE 3523 50.60 +1 4124410..4131840 - 2476 146294634 - Sputcn32_3550 - fibronectin, type III domain-containing protein 3524 46.67 0 4131903..4132502 - 199 146294635 - Sputcn32_3551 - phage tail collar domain-containing protein 3525 41.57 0 4132728..4133225 - 165 146294636 - Sputcn32_3552 - GCN5-related N-acetyltransferase 3526 41.43 0 4133215..4134387 - 390 146294637 - Sputcn32_3553 - hypothetical protein 3527 47.46 0 4134387..4135469 - 360 146294638 - Sputcn32_3554 - phytanoyl-CoA dioxygenase 3528 44.05 0 4135447..4136034 - 195 146294639 - Sputcn32_3555 - aspartyl/asparaginyl beta-hydroxylase 3529 43.45 0 4136129..4136830 + 233 146294640 - Sputcn32_3556 - HAD family hydrolase 3530 44.09 0 4136865..4137626 - 253 146294641 - Sputcn32_3557 - type II secretion system protein N 3531 45.70 0 4137637..4138113 - 158 146294642 - Sputcn32_3558 - general secretion pathway M protein 3532 45.62 0 4138115..4139302 - 395 146294643 - Sputcn32_3559 - general secretion pathway protein L 3533 44.28 0 4139353..4140357 - 334 146294644 - Sputcn32_3560 - general secretion pathway protein K 3534 44.93 0 4140354..4141112 - 252 146294645 - Sputcn32_3561 - general secretion pathway protein J 3535 45.80 0 4141093..4141461 - 122 146294646 - Sputcn32_3562 - general secretion pathway protein I 3536 42.93 0 4141448..4142020 - 190 146294647 - Sputcn32_3563 - general secretion pathway protein H 3537 43.22 0 4142022..4142456 - 144 146294648 - Sputcn32_3564 - general secretion pathway protein G 3538 48.20 0 4142520..4143743 - 407 146294649 - Sputcn32_3565 - general secretion pathway protein F 3539 47.38 0 4143747..4145312 - 521 146294650 - Sputcn32_3566 - general secretion pathway protein E 3540 46.50 0 4145305..4147416 - 703 146294651 - Sputcn32_3567 - general secretion pathway protein D 3541 46.71 0 4147441..4148367 - 308 146294652 - Sputcn32_3568 - general secretion pathway protein C 3542 45.36 0 4148620..4149018 + 132 146294653 - Sputcn32_3569 - RNA-binding S4 domain-containing protein 3543 45.76 0 4149034..4149894 + 286 146294654 hslO Sputcn32_3570 - Hsp33-like chaperonin 3544 50.06 +1 4150097..4151638 + 513 146294655 - Sputcn32_3571 - phosphoenolpyruvate carboxykinase 3545 44.57 0 4151839..4152390 + 183 146294656 - Sputcn32_3572 - hypothetical protein 3546 37.75 -1 4152402..4152854 + 150 146294657 - Sputcn32_3573 - hypothetical protein 3547 44.93 0 4153019..4153906 + 295 146294658 - Sputcn32_3574 - hypothetical protein 3548 43.46 0 4155235..4156014 + 259 146294659 - Sputcn32_3576 - hypothetical protein 3549 46.03 0 4156136..4156639 + 167 146294660 - Sputcn32_3577 - putative transcriptional regulator 3550 47.32 0 4156647..4157225 - 192 146294661 - Sputcn32_3578 - HupE/UreJ protein 3551 45.64 0 4157370..4158092 - 240 146294662 - Sputcn32_3579 - HAD family hydrolase 3552 45.10 0 4158092..4159000 - 302 146294663 - Sputcn32_3580 - tyrosine recombinase XerC 3553 42.14 0 4159083..4159718 - 211 146294664 - Sputcn32_3581 - hypothetical protein 3554 47.58 0 4159715..4160542 - 275 146294665 dapF Sputcn32_3582 - diaminopimelate epimerase 3555 47.71 0 4160619..4161863 - 414 146294666 - Sputcn32_3583 - diaminopimelate decarboxylase 3556 45.89 0 4161915..4162121 - 68 146294667 - Sputcn32_3584 - hypothetical protein 3557 45.76 0 4162189..4162518 + 109 146294668 - Sputcn32_3585 - frataxin family protein 3558 42.32 0 4162573..4164987 - 804 146294669 cyaA Sputcn32_3586 - adenylate cyclase 3559 47.59 0 4165190..4166122 + 310 146294670 hemC Sputcn32_3587 - porphobilinogen deaminase 3560 45.61 0 4166127..4166867 + 246 146294671 - Sputcn32_3588 - uroporphyrinogen III synthase HEM4 3561 43.83 0 4166928..4168127 + 399 146294672 - Sputcn32_3589 - protein of unknown function DUF513, hemX 3562 44.04 0 4168124..4169290 + 388 146294673 - Sputcn32_3590 - HemY domain-containing protein 3563 53.18 +2 4169699..4182361 + 4220 146294674 - Sputcn32_3591 - putative outer membrane adhesin like proteiin 3564 41.92 0 4182451..4184628 + 725 146294675 - Sputcn32_3592 - ABC transporter related 3565 43.75 0 4184625..4186007 + 460 146294676 - Sputcn32_3593 - HlyD family type I secretion membrane fusion protein 3566 42.94 0 4186034..4187449 + 471 146294677 - Sputcn32_3594 - TolC family type I secretion outer membrane protein 3567 44.33 0 4187446..4188054 + 202 146294678 - Sputcn32_3595 - OmpA/MotB domain-containing protein 3568 40.79 -1 4188070..4188780 + 236 146294679 - Sputcn32_3596 - hypothetical protein 3569 40.73 -1 4188790..4190709 + 639 146294680 - Sputcn32_3597 - diguanylate cyclase/phosphodiesterase 3570 40.62 -1 4191716..4194349 + 877 146294681 - Sputcn32_3598 - diguanylate cyclase/phosphodiesterase with GAF sensor 3571 44.81 0 4194386..4196398 - 670 146294682 - Sputcn32_3599 - ATP-dependent DNA helicase Rep 3572 40.70 -1 4196607..4196864 + 85 146294683 - Sputcn32_3600 - hypothetical protein 44.78 MEAN 3.68 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0