version 1.0
Shewanella putrefaciens CN-32, complete genome - 1..4659220 3972 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3277 44.66 0 3848750..3850144 - 464 146294388 - Sputcn32_3301 - PhoH family protein 3278 49.16 +1 3850547..3853453 + 968 146294389 - Sputcn32_3302 - ATP-dependent helicase HepA 3279 45.76 0 3853623..3854507 + 294 146294390 - Sputcn32_3303 - hypothetical protein 3280 44.86 0 3854566..3855372 - 268 146294391 - Sputcn32_3304 - enoyl-CoA hydratase 3281 45.08 0 3855891..3856886 + 331 146294392 - Sputcn32_3305 - CheC, inhibitor of MCP methylation 3282 43.28 0 3856905..3857879 + 324 146294393 - Sputcn32_3306 - diguanylate cyclase 3283 43.70 0 3857951..3858355 - 134 146294394 - Sputcn32_3307 - hypothetical protein 3284 42.75 0 3858399..3859184 - 261 146294395 - Sputcn32_3308 - 1-acyl-sn-glycerol-3-phosphate acyltransferase 3285 45.37 0 3859294..3860082 - 262 146294396 - Sputcn32_3309 - ABC-3 protein 3286 47.41 0 3860088..3860996 - 302 146294397 - Sputcn32_3310 - periplasmic solute binding protein 3287 42.95 0 3860980..3862164 - 394 146294398 - Sputcn32_3311 - hypothetical protein 3288 43.99 0 3862242..3862532 - 96 146294399 - Sputcn32_3312 - hypothetical protein 3289 36.51 -2 3862819..3862944 + 41 146294400 - Sputcn32_3313 - hypothetical protein 3290 47.99 0 3863119..3864831 - 570 146294401 - Sputcn32_3314 - formate--tetrahydrofolate ligase 3291 45.61 0 3865006..3865836 - 276 146294402 - Sputcn32_3315 - dehydratase 3292 43.15 0 3866245..3867018 + 257 146294403 - Sputcn32_3316 - methyltransferase type 11 3293 45.67 0 3867043..3867942 - 299 146294404 - Sputcn32_3317 - GumN family protein 3294 42.39 0 3867991..3868299 + 102 146294405 - Sputcn32_3318 - hypothetical protein 3295 42.91 0 3868463..3870217 + 584 146294406 - Sputcn32_3319 - diguanylate cyclase/phosphodiesterase 3296 40.76 -1 3870231..3870755 - 174 146294407 - Sputcn32_3320 - hypothetical protein 3297 38.51 -1 3871028..3871336 + 102 146294408 - Sputcn32_3321 - hypothetical protein 3298 41.57 0 3871368..3871877 - 169 146294409 - Sputcn32_3322 - hypothetical protein 3299 42.58 0 3871922..3872386 + 154 146294410 - Sputcn32_3323 - hypothetical protein 3300 43.11 0 3872469..3873266 + 265 146294411 - Sputcn32_3324 - response regulator receiver protein 3301 45.05 0 3873413..3873685 + 90 146294412 - Sputcn32_3325 - histone family protein DNA-binding protein 3302 42.28 0 3873983..3874675 + 230 146294413 - Sputcn32_3326 - hypothetical protein 3303 43.49 0 3874756..3875661 - 301 146294414 - Sputcn32_3327 - alpha-L-glutamate ligase 3304 42.22 0 3875822..3877543 - 573 146294415 - Sputcn32_3328 - response regulator receiver modulated diguanylate cyclase/phosphodiesterase 3305 41.84 0 3877553..3877987 - 144 146294416 - Sputcn32_3329 - response regulator receiver protein 3306 41.32 0 3877984..3880137 - 717 146294417 - Sputcn32_3330 - multi-sensor signal transduction histidine kinase 3307 44.07 0 3880446..3880622 + 58 146294418 - Sputcn32_3331 - hypothetical protein 3308 45.13 0 3881024..3882379 + 451 146294419 - Sputcn32_3332 - hypothetical protein 3309 45.90 0 3882455..3883831 - 458 146294420 - Sputcn32_3333 - amino acid carrier protein 3310 44.40 0 3884078..3885514 - 478 146294421 - Sputcn32_3334 - beta-lactamase domain-containing protein 3311 42.91 0 3885639..3886484 - 281 146294422 - Sputcn32_3335 - hypothetical protein 3312 40.70 -1 3886517..3886774 - 85 146294423 - Sputcn32_3336 - redox-active disulfide protein 2 3313 47.40 0 3887094..3887420 - 108 146294424 - Sputcn32_3337 - antibiotic biosynthesis monooxygenase 3314 46.93 0 3887494..3887949 - 151 146294425 - Sputcn32_3338 - GCN5-related N-acetyltransferase 3315 45.74 0 3888148..3888558 + 136 146294426 mscL Sputcn32_3339 - large-conductance mechanosensitive channel 3316 47.22 0 3888636..3888959 - 107 146294427 - Sputcn32_3340 - antibiotic biosynthesis monooxygenase 3317 53.35 +2 3889120..3892347 - 1075 146294428 - Sputcn32_3341 - CzcA family heavy metal efflux protein 3318 53.55 +2 3892377..3893642 - 421 146294429 - Sputcn32_3342 - RND family efflux transporter MFP subunit 3319 50.24 +1 3893653..3895131 - 492 146294430 - Sputcn32_3343 - outer membrane efflux protein 3320 48.20 0 3895462..3895905 - 147 146294431 - Sputcn32_3344 - hypothetical protein 3321 47.34 0 3896111..3896317 - 68 146294432 - Sputcn32_3345 - hypothetical protein 3322 48.91 +1 3896354..3896719 - 121 146294433 - Sputcn32_3346 - hypothetical protein 3323 47.45 0 3896856..3897287 + 143 146294434 - Sputcn32_3347 - hypothetical protein 3324 50.34 +1 3897406..3897840 + 144 146294435 - Sputcn32_3348 - 3-dehydroquinate dehydratase 3325 48.67 +1 3897895..3898572 + 225 146294436 - Sputcn32_3349 - short-chain dehydrogenase/reductase SDR 3326 41.19 0 3898635..3899309 - 224 146294437 - Sputcn32_3350 - hypothetical protein 3327 47.75 0 3899776..3900552 - 258 146294438 - Sputcn32_3351 - hypothetical protein 3328 50.27 +1 3900712..3902193 + 493 146294439 - Sputcn32_3352 - UbiD family decarboxylase 3329 48.07 0 3902306..3903004 + 232 146294440 fre Sputcn32_3353 - FMN reductase 3330 38.12 -1 3903741..3904847 - 368 146294441 - Sputcn32_3354 - hypothetical protein 3331 48.97 +1 3905579..3906211 - 210 146294442 - Sputcn32_3355 - flavoprotein oxygenase 3332 43.61 0 3906229..3907512 - 427 146294443 - Sputcn32_3356 - transcriptional regulator, CadC 3333 42.09 0 3907734..3908612 - 292 146294444 - Sputcn32_3357 - copper ABC transporter, permease protein 3334 44.64 0 3908609..3909643 - 344 146294445 - Sputcn32_3358 - ABC transporter related 3335 46.84 0 3909640..3910935 - 431 146294446 - Sputcn32_3359 - periplasmic copper-binding 3336 46.75 0 3910940..3911431 - 163 146294447 - Sputcn32_3360 - NosL family protein 3337 46.84 0 3911520..3912200 - 226 146294448 - Sputcn32_3361 - formate-dependent nitrite reductase, NrfG protein 3338 43.68 0 3912235..3913017 - 260 146294449 - Sputcn32_3362 - peptidylprolyl isomerase, FKBP-type 3339 46.03 0 3913103..3913543 - 146 146294450 - Sputcn32_3363 - rhodanese domain-containing protein 3340 43.47 0 3913606..3915735 - 709 146294451 - Sputcn32_3364 - cytochrome c, putative 3341 45.96 0 3916280..3918409 + 709 146294452 - Sputcn32_3365 - cytochrome c-type biogenesis protein CcmF 3342 44.29 0 3918409..3918828 + 139 146294453 - Sputcn32_3366 - cytochrome C biogenesis protein 3343 42.74 0 3918845..3919429 + 194 146294454 - Sputcn32_3367 - redoxin domain-containing protein 3344 44.21 0 3919605..3920183 + 192 146294455 - Sputcn32_3368 - hypothetical protein 3345 46.74 0 3920249..3920539 + 96 146294456 - Sputcn32_3369 - putative mitomycin resistance protein 3346 47.37 0 3920543..3921625 - 360 146294457 - Sputcn32_3370 - hypothetical protein 3347 50.80 +1 3921696..3922760 - 354 146294458 - Sputcn32_3371 - 2-nitropropane dioxygenase, NPD 3348 45.18 0 3922843..3923703 - 286 146294459 ubiA Sputcn32_3372 - 4-hydroxybenzoate octaprenyltransferase 3349 49.70 +1 3923849..3926017 - 722 146294460 uvrD Sputcn32_3373 - DNA-dependent helicase II 3350 39.90 -1 3926965..3928410 + 481 146294461 - Sputcn32_3375 - hypothetical protein 3351 40.96 -1 3928641..3931274 + 877 146294462 - Sputcn32_3376 - helicase domain-containing protein 3352 45.08 0 3931857..3933056 + 399 146294463 - Sputcn32_3377 - hypothetical protein 3353 48.40 0 3933082..3933519 - 145 146294464 - Sputcn32_3378 - NUDIX hydrolase 3354 47.82 0 3933916..3935406 + 496 146294465 - Sputcn32_3379 - protein of unknown function DUF853, NPT hydrolase putative 3355 34.96 -2 3935721..3935843 + 40 146294466 - Sputcn32_3380 - hypothetical protein 3356 43.68 0 3936082..3937038 + 318 146294467 - Sputcn32_3381 - TRAP transporter solute receptor TAXI family protein 3357 46.66 0 3937142..3939175 + 677 146294468 - Sputcn32_3382 - TRAP transporter, 4TM/12TM fusion protein 3358 49.88 +1 3939221..3939625 + 134 146294469 - Sputcn32_3383 - hypothetical protein 3359 42.50 0 3939622..3940341 - 239 146294470 - Sputcn32_3384 - regulatory protein GntR, HTH 3360 41.08 -1 3940625..3941863 + 412 146294471 - Sputcn32_3385 - outer membrane porin 3361 43.75 0 3942003..3943739 + 578 146294472 - Sputcn32_3386 - tannase and feruloyl esterase 3362 44.68 0 3944294..3945967 + 557 146294473 - Sputcn32_3387 - fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein 3363 39.89 -1 3946036..3946386 + 116 146294474 - Sputcn32_3388 - hypothetical protein 3364 32.41 -2 3946714..3946929 - 71 146294475 - Sputcn32_3389 - hypothetical protein 3365 42.46 0 3947252..3948226 - 324 146294476 - Sputcn32_3390 - diguanylate cyclase with PAS/PAC sensor 3366 43.15 0 3948388..3948723 - 111 146294477 - Sputcn32_3391 - peptidylprolyl isomerase, FKBP-type 3367 43.76 0 3948848..3949384 + 178 146294478 - Sputcn32_3392 - thioredoxin 3368 43.33 0 3949466..3950866 - 466 146294479 - Sputcn32_3393 - anion transporter 3369 44.39 0 3951459..3952625 + 388 146294480 - Sputcn32_3394 - major facilitator transporter 3370 44.49 0 3952702..3954324 - 540 146294481 - Sputcn32_3395 - PepSY-associated TM helix domain-containing protein 3371 41.24 0 3954330..3954620 - 96 146294482 - Sputcn32_3396 - hypothetical protein 3372 39.53 -1 3954624..3954881 - 85 146294483 - Sputcn32_3397 - hypothetical protein 3373 44.82 0 3955285..3956172 + 295 146294484 - Sputcn32_3398 - band 7 protein 3374 50.67 +1 3956291..3957778 - 495 146294485 - Sputcn32_3399 - permease 3375 52.87 +2 3957781..3958251 - 156 146294486 zntR Sputcn32_3400 - zinc-responsive transcriptional regulator 3376 51.59 +1 3958589..3960220 + 543 146294487 purH Sputcn32_3401 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 44.78 MEAN 3.68 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.