version 1.0
Shewanella putrefaciens CN-32, complete genome - 1..4659220 3972 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 282 47.62 0 302279..302719 - 146 146291393 - Sputcn32_0285 - hypothetical protein 283 42.38 0 303207..303770 + 187 146291394 - Sputcn32_0286 - NapC/NirT cytochrome c domain-containing protein 284 39.13 -1 303844..304119 - 91 146291395 - Sputcn32_0287 - hypothetical protein 285 47.30 0 304103..304768 - 221 146291396 - Sputcn32_0288 - putative methyltransferase 286 47.76 0 304982..306430 + 482 146291397 - Sputcn32_0289 - signal recognition particle-docking protein FtsY 287 47.14 0 306434..307150 + 238 146291398 - Sputcn32_0290 - cell division ATP-binding protein FtsE 288 45.45 0 307147..308112 + 321 146291399 - Sputcn32_0291 - hypothetical protein 289 45.34 0 308360..309217 + 285 146291400 - Sputcn32_0292 - RNA polymerase factor sigma-32 290 41.25 0 310518..311060 + 180 146291401 - Sputcn32_0293 - fimbrial protein 291 39.52 -1 311981..313354 + 457 146291402 - Sputcn32_0295 - hypothetical protein 292 35.83 -2 313743..314063 + 106 146291403 - Sputcn32_0296 - hypothetical protein 293 43.01 0 314187..315530 + 447 146291404 - Sputcn32_0297 - fimbrial subunit 294 45.86 0 315969..316511 + 180 146291405 - Sputcn32_0298 - fimbrial protein 295 42.25 0 316590..317318 + 242 146291406 - Sputcn32_0299 - pili assembly chaperone 296 45.91 0 317329..319881 + 850 146291407 - Sputcn32_0300 - fimbrial biogenesis outer membrane usher protein 297 44.27 0 319895..321265 + 456 146291408 - Sputcn32_0301 - fimbrial subunit 298 39.18 -1 321427..322161 + 244 146291409 - Sputcn32_0302 - pili assembly chaperone 299 40.02 -1 322756..326346 - 1196 146291410 - Sputcn32_0303 - multi-sensor hybrid histidine kinase 300 37.02 -2 326343..326966 - 207 146291411 - Sputcn32_0304 - two component LuxR family transcriptional regulator 301 37.77 -1 327334..328572 + 412 146291412 - Sputcn32_0305 - response regulator receiver modulated diguanylate phosphodiesterase 302 34.19 -2 328682..329380 + 232 146291413 - Sputcn32_0306 - hypothetical protein 303 46.37 0 329452..330870 - 472 146291414 - Sputcn32_0307 - O-succinylbenzoate-CoA ligase 304 45.21 0 330872..331966 - 364 146291415 - Sputcn32_0308 - O-succinylbenzoate synthase 305 46.51 0 331994..332782 - 262 146291416 - Sputcn32_0309 - alpha/beta hydrolase fold 306 47.15 0 332782..334503 - 573 146291417 - Sputcn32_0310 - 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase 307 38.39 -1 334686..335654 - 322 146291418 - Sputcn32_0311 - LysR family transcriptional regulator 308 35.64 -2 336066..336542 + 158 146291419 - Sputcn32_0312 - hypothetical protein 309 47.53 0 336620..337084 + 154 146291420 - Sputcn32_0313 - formate-dependent nitrite reductase 310 44.98 0 337089..337775 + 228 146291421 - Sputcn32_0314 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 311 43.10 0 337772..338713 + 313 146291422 - Sputcn32_0315 - polysulphide reductase, NrfD 312 43.06 0 338992..339423 - 143 146291423 - Sputcn32_0316 - AsnC family transcriptional regulator 313 46.48 0 339673..340935 + 420 146291424 - Sputcn32_0317 - inner membrane protein YjeH 314 44.44 0 340918..341376 - 152 146291425 - Sputcn32_0318 - hypothetical protein 315 46.52 0 341474..342004 - 176 146291426 - Sputcn32_0319 - hypothetical protein 316 42.80 0 342194..342901 + 235 146291427 - Sputcn32_0320 - hypothetical protein 317 45.70 0 342936..344390 + 484 146291428 - Sputcn32_0321 - Sel1 domain-containing protein 318 45.76 0 344400..344729 - 109 146291429 - Sputcn32_0322 - hypothetical protein 319 47.01 0 345092..346963 + 623 146291430 - Sputcn32_0323 - methyl-accepting chemotaxis sensory transducer 320 44.44 0 347066..348037 - 323 146291431 - Sputcn32_0324 - LysR family transcriptional regulator 321 46.65 0 348151..349359 + 402 146291432 - Sputcn32_0325 - Bcr/CflA subfamily drug resistance transporter 322 42.74 0 349483..350088 + 201 146291433 - Sputcn32_0326 - DTW domain-containing protein 323 43.14 0 350449..352569 - 706 146291434 - Sputcn32_0327 - diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) 324 38.98 -1 352876..353229 + 117 146291435 - Sputcn32_0328 - hypothetical protein 325 41.78 0 353300..353938 + 212 146291436 - Sputcn32_0329 - methyltransferase type 11 326 42.81 0 354269..356326 + 685 146291437 - Sputcn32_0330 - TonB-dependent receptor 327 45.22 0 356420..357403 - 327 146291438 - Sputcn32_0331 - formate dehydrogenase, gamma subunit 328 48.95 +1 357483..358052 - 189 146291439 - Sputcn32_0332 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 329 49.07 +1 358082..360934 - 950 146291440 - Sputcn32_0333 - molybdopterin oxidoreductase 330 53.73 +2 360952..361152 - 66 146291441 - Sputcn32_0334 - twin-arginine translocation pathway signal 331 46.36 0 361537..362565 - 342 146291442 - Sputcn32_0335 - formate dehydrogenase, gamma subunit 332 48.91 +1 362615..363211 - 198 146291443 - Sputcn32_0336 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 333 46.84 0 363238..366087 - 949 146291444 - Sputcn32_0337 - molybdopterin oxidoreductase 334 50.22 +1 366106..366336 - 76 146291445 - Sputcn32_0338 - hypothetical protein 335 48.08 0 366463..367140 - 225 146291446 - Sputcn32_0339 - cytoplasmic chaperone TorD family protein 336 46.21 0 367151..368812 - 553 146291447 - Sputcn32_0340 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 337 45.36 0 369000..369656 - 218 146291448 - Sputcn32_0341 - hypothetical protein 338 46.24 0 369656..370120 - 154 146291449 - Sputcn32_0342 - hypothetical protein 339 41.69 0 370426..371322 + 298 146291450 - Sputcn32_0343 - formate dehydrogenase, subunit FdhD 340 45.36 0 371385..372290 + 301 146291451 - Sputcn32_0344 - DNA binding domain-containing protein 341 40.74 -1 378641..379153 + 170 146291452 - Sputcn32_0345 - hypothetical protein 342 40.48 -1 379564..379773 + 69 146291453 - Sputcn32_0346 - hypothetical protein 343 45.80 0 380239..381642 + 467 146291454 - Sputcn32_0347 - anion transporter 344 47.98 0 381710..383218 + 502 146291455 - Sputcn32_0348 - tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit 345 43.95 0 383302..383979 - 225 146291456 - Sputcn32_0349 - response regulator receiver 346 40.65 -1 383969..385636 - 555 146291457 - Sputcn32_0350 - signal transduction histidine kinase regulating citrate/malate metabolism 347 47.54 0 385820..386185 - 121 146291458 - Sputcn32_0351 - fumarate reductase subunit D 348 44.53 0 386198..386581 - 127 146291459 - Sputcn32_0352 - fumarate reductase subunit C 349 45.07 0 386583..387323 - 246 146291460 - Sputcn32_0353 - fumarate reductase iron-sulfur subunit 350 48.25 0 387323..389098 - 591 146291461 - Sputcn32_0354 - fumarate reductase flavoprotein subunit 351 42.46 0 389401..389970 - 189 146291462 - Sputcn32_0355 - GCN5-related N-acetyltransferase 352 49.43 +1 389991..391307 - 438 146291463 - Sputcn32_0356 - integral membrane sensor signal transduction histidine kinase 353 51.82 +1 391312..391971 - 219 146291464 - Sputcn32_0357 - two component transcriptional regulator 354 52.43 +2 391971..392237 - 88 146291465 - Sputcn32_0358 - peptidase 355 51.77 +1 392230..392793 - 187 146291466 - Sputcn32_0359 - diheme cytochrome c 356 52.13 +1 392884..393330 - 148 146291467 - Sputcn32_0360 - cytochrome c-type protein Shp 357 49.66 +1 393384..393971 - 195 146291468 - Sputcn32_0361 - cytochrome B561 358 45.16 0 394188..394652 + 154 146291469 - Sputcn32_0362 - hypothetical protein 359 45.04 0 394733..395236 + 167 146291470 - Sputcn32_0363 - hypothetical protein 360 49.90 +1 395402..396922 - 506 146291471 - Sputcn32_0364 - aldehyde dehydrogenase 361 48.63 +1 397183..399084 + 633 146291472 - Sputcn32_0365 - Fis family GAF modulated sigma54 specific transcriptional regulator 362 43.33 0 399127..400476 - 449 146291473 - Sputcn32_0366 - integral membrane sensor signal transduction histidine kinase 363 44.69 0 400491..401177 - 228 146291474 - Sputcn32_0367 - two component transcriptional regulator 364 41.46 0 401444..401935 + 163 146291475 - Sputcn32_0368 - protein of unknown function, Spy-related 365 45.01 0 401986..402867 + 293 146291476 - Sputcn32_0369 - cation diffusion facilitator family transporter 366 41.77 0 402886..403347 + 153 146291477 - Sputcn32_0370 - hypothetical protein 367 48.90 +1 403434..404846 - 470 146291478 - Sputcn32_0371 - nitrogen metabolism transcriptional regulator, NtrC, Fis family 368 46.90 0 404884..405930 - 348 146291479 - Sputcn32_0372 - signal transduction histidine kinase, nitrogen specific, NtrB 369 40.74 -1 406052..406591 - 179 146291480 - Sputcn32_0373 - hypothetical protein 370 42.42 0 406777..407139 - 120 146291481 - Sputcn32_0374 - glutathione S-transferase-like protein 371 46.45 0 407300..407665 - 121 146291482 - Sputcn32_0375 - glutathione S-transferase domain-containing protein 372 46.75 0 407799..408491 - 230 146291483 - Sputcn32_0376 - ThiJ/PfpI domain-containing protein 373 47.84 0 408563..409720 - 385 146291484 - Sputcn32_0377 - iron-containing alcohol dehydrogenase 374 44.50 0 409863..410471 - 202 146291485 - Sputcn32_0378 - TetR family transcriptional regulator 375 44.23 0 410754..411065 - 103 146291486 - Sputcn32_0379 - hypothetical protein 376 46.01 0 411424..413379 + 651 146291487 - Sputcn32_0380 - methyl-accepting chemotaxis sensory transducer 377 46.41 0 413512..415629 - 705 146291488 - Sputcn32_0381 - hypothetical protein 378 43.43 0 415995..416390 + 131 146291489 - Sputcn32_0382 - hypothetical protein 379 47.95 0 416767..417621 + 284 146291490 - Sputcn32_0383 - ribokinase-like domain-containing protein 380 40.79 -1 417926..419386 + 486 146291491 - Sputcn32_0384 - diguanylate cyclase 381 44.54 0 419515..420210 + 231 146291492 - Sputcn32_0385 - MOSC domain-containing protein 44.78 MEAN 3.68 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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