version 1.0
Shewanella putrefaciens CN-32, complete genome - 1..4659220 3972 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2996 44.48 0 3501588..3502484 + 298 146294107 - Sputcn32_3019 - hypothetical protein 2997 45.10 0 3502694..3504163 - 489 146294108 - Sputcn32_3020 - phosphate transporter 2998 45.49 0 3504620..3506404 - 594 146294109 mdoD Sputcn32_3021 - glucan biosynthesis protein D 2999 43.45 0 3506561..3508033 - 490 146294110 - Sputcn32_3022 - carbon starvation protein CstA 3000 47.82 0 3508146..3508649 - 167 146294111 - Sputcn32_3023 - GCN5-related N-acetyltransferase 3001 43.33 0 3508797..3509516 - 239 146294112 - Sputcn32_3024 - LrgB family protein 3002 42.53 0 3509519..3509953 - 144 146294113 - Sputcn32_3025 - LrgA family protein 3003 47.47 0 3510076..3510966 + 296 146294114 - Sputcn32_3026 - LysR family transcriptional regulator 3004 44.08 0 3511391..3512125 + 244 146294115 - Sputcn32_3027 - extracellular solute-binding protein 3005 46.40 0 3512133..3512813 + 226 146294116 - Sputcn32_3028 - polar amino acid ABC transporter, inner membrane subunit 3006 50.00 +1 3512806..3513531 + 241 146294117 - Sputcn32_3029 - ABC transporter related 3007 38.75 -1 3514011..3514748 - 245 146294118 - Sputcn32_3030 - hypothetical protein 3008 41.67 0 3514874..3515161 - 95 146294119 - Sputcn32_3031 - hypothetical protein 3009 39.20 -1 3515352..3515726 - 124 146294120 - Sputcn32_3032 - hypothetical protein 3010 37.11 -2 3515786..3515944 - 52 146294121 - Sputcn32_3033 - hypothetical protein 3011 42.51 0 3516076..3516729 + 217 146294122 - Sputcn32_3034 - dihydropteridine reductase 3012 44.34 0 3517043..3517687 + 214 146294123 - Sputcn32_3035 - heat shock protein DnaJ domain-containing protein 3013 40.64 -1 3517991..3518743 + 250 146294124 - Sputcn32_3036 - DSBA oxidoreductase 3014 43.22 0 3518792..3519337 - 181 146294125 - Sputcn32_3037 - hypothetical protein 3015 39.08 -1 3519371..3519892 - 173 146294126 - Sputcn32_3038 - protoporphyrinogen oxidase 3016 44.64 0 3520361..3521200 + 279 146294127 - Sputcn32_3039 - hypothetical protein 3017 50.32 +1 3521258..3521875 - 205 146294128 - Sputcn32_3040 - adenylyl-sulfate kinase 3018 46.55 0 3521940..3523664 - 574 146294129 - Sputcn32_3041 - TrkA domain-containing protein 3019 49.20 +1 3523668..3525110 - 480 146294130 cysN Sputcn32_3042 - sulfate adenylyltransferase subunit 1 3020 48.62 +1 3525193..3526101 - 302 146294131 - Sputcn32_3043 - sulfate adenylyltransferase subunit 2 3021 49.64 +1 3526167..3527000 - 277 146294132 - Sputcn32_3044 - uroporphyrin-III C-methyltransferase 3022 41.04 -1 3527439..3528320 + 293 146294133 - Sputcn32_3045 - phospholipase A(1) 3023 40.80 -1 3528562..3530127 + 521 146294134 - Sputcn32_3046 - peptidase S41 3024 42.93 0 3530182..3531150 - 322 146294135 pbpG Sputcn32_3047 - D-alanyl-D-alanine endopeptidase 3025 37.92 -1 3531711..3531950 + 79 146294136 - Sputcn32_3048 - hypothetical protein 3026 47.90 0 3532061..3533563 - 500 146294137 lysS Sputcn32_3049 - lysyl-tRNA synthetase 3027 49.58 +1 3533593..3534651 - 352 146294138 - Sputcn32_3050 - peptide chain release factor 2 3028 46.74 0 3535188..3539462 + 1424 146294139 - Sputcn32_3051 - formate dehydrogenase, alpha subunit 3029 43.90 0 3539538..3541202 - 554 146294140 - Sputcn32_3052 - methyl-accepting chemotaxis sensory transducer 3030 47.31 0 3541338..3542489 - 383 146294141 - Sputcn32_3053 - chromate transporter 3031 45.21 0 3542618..3543787 - 389 146294142 rumB Sputcn32_3054 - 23S rRNA methyluridine methyltransferase 3032 47.02 0 3543864..3545039 - 391 146294143 - Sputcn32_3055 - FAD dependent oxidoreductase 3033 43.39 0 3545145..3545651 - 168 146294144 - Sputcn32_3056 - MarR family transcriptional regulator 3034 47.42 0 3545786..3546211 + 141 146294145 - Sputcn32_3057 - OsmC family protein 3035 45.29 0 3546439..3547860 + 473 146294146 - Sputcn32_3058 - hypothetical protein 3036 41.40 0 3547945..3548130 + 61 146294147 - Sputcn32_3059 - hypothetical protein 3037 42.26 0 3548247..3549983 - 578 146294148 - Sputcn32_3060 - hypothetical protein 3038 45.93 0 3550239..3551024 - 261 146294149 - Sputcn32_3061 - monofunctional biosynthetic peptidoglycan transglycosylase 3039 48.28 0 3551606..3552388 - 260 146294150 - Sputcn32_3062 - phosphoadenosine phosphosulfate reductase 3040 50.29 +1 3552381..3554078 - 565 146294151 - Sputcn32_3063 - sulfite reductase subunit beta 3041 48.72 +1 3554178..3555977 - 599 146294152 - Sputcn32_3064 - sulfite reductase (NADPH) flavoprotein, alpha chain 3042 49.90 +1 3556398..3557924 + 508 146294153 pntA Sputcn32_3065 - NAD(P) transhydrogenase subunit alpha 3043 48.96 +1 3557936..3559420 + 494 146294154 pntB Sputcn32_3066 - pyridine nucleotide transhydrogenase 3044 41.88 0 3559528..3560007 - 159 146294155 - Sputcn32_3067 - TetR family transcriptional regulator 3045 41.30 0 3560160..3560987 - 275 146294156 - Sputcn32_3068 - hypothetical protein 3046 49.97 +1 3560984..3562414 - 476 146294157 - Sputcn32_3069 - bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase 3047 46.39 0 3562572..3563444 + 290 146294158 - Sputcn32_3070 - lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 3048 45.80 0 3563511..3565235 - 574 146294159 - Sputcn32_3071 - potassium/proton antiporter 3049 45.67 0 3565847..3568132 + 761 146294160 - Sputcn32_3072 - putative nitric oxide reductase (subunit B) transmembrane protein 3050 45.56 0 3568359..3569912 + 517 146294161 - Sputcn32_3073 - anaerobic nitric oxide reductase transcription regulator 3051 46.67 0 3570084..3570998 + 304 146294162 - Sputcn32_3074 - ErfK/YbiS/YcfS/YnhG family protein 3052 43.84 0 3571061..3571888 - 275 146294163 - Sputcn32_3075 - hypothetical protein 3053 44.99 0 3572132..3573349 + 405 146294164 - Sputcn32_3076 - AFG1 family ATPase 3054 44.88 0 3573377..3574060 - 227 146294165 - Sputcn32_3077 - two component transcriptional regulator 3055 46.90 0 3574110..3576770 - 886 146294166 - Sputcn32_3078 - osmosensitive K+ channel signal transduction histidine kinase 3056 49.03 +1 3576773..3577543 - 256 146294167 - Sputcn32_3079 - hypothetical protein 3057 51.67 +1 3577578..3578177 - 199 146294168 - Sputcn32_3080 - potassium-transporting ATPase, C subunit 3058 50.62 +1 3578187..3580205 - 672 146294169 - Sputcn32_3081 - K+-transporting ATPase, B subunit 3059 48.12 0 3580208..3581932 - 574 146294170 - Sputcn32_3082 - potassium-transporting ATPase subunit A 3060 44.63 0 3582590..3583660 - 356 146294171 - Sputcn32_3083 - LysR family transcriptional regulator 3061 46.77 0 3583724..3584683 + 319 146294172 - Sputcn32_3084 - hypothetical protein 3062 44.03 0 3584766..3585737 - 323 146294173 - Sputcn32_3085 - diguanylate cyclase 3063 45.20 0 3585814..3588678 - 954 146294174 - Sputcn32_3086 - (glutamate--ammonia-ligase) adenylyltransferase 3064 47.15 0 3588904..3589887 + 327 146294175 - Sputcn32_3087 - hypothetical protein 3065 43.56 0 3589901..3590800 + 299 146294176 - Sputcn32_3088 - hypothetical protein 3066 45.45 0 3590805..3592529 + 574 146294177 - Sputcn32_3089 - spermidine synthase 3067 40.10 -1 3592608..3593021 + 137 146294178 - Sputcn32_3090 - hypothetical protein 3068 44.20 0 3593033..3593722 + 229 146294179 - Sputcn32_3091 - phage shock protein A, PspA 3069 42.81 0 3593881..3594534 + 217 146294180 - Sputcn32_3092 - hypothetical protein 3070 43.94 0 3594656..3594985 + 109 146294181 - Sputcn32_3093 - hypothetical protein 3071 42.70 0 3595128..3595949 + 273 146294182 - Sputcn32_3094 - Ion transport 2 domain-containing protein 3072 45.19 0 3596025..3597551 - 508 146294183 - Sputcn32_3095 - adenylate cyclase 3073 43.47 0 3597769..3598449 + 226 146294184 - Sputcn32_3096 - hypothetical protein 3074 45.81 0 3598475..3599764 + 429 146294185 - Sputcn32_3097 - phosphate transporter 3075 41.35 0 3599961..3600509 + 182 146294186 - Sputcn32_3098 - SH3 type 3 domain-containing protein 3076 49.20 +1 3600757..3603951 + 1064 146294187 - Sputcn32_3099 - bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 3077 36.55 -2 3604909..3605406 + 165 146294188 - Sputcn32_3100 - hypothetical protein 3078 36.75 -2 3605443..3605793 + 116 146294189 - Sputcn32_3101 - hypothetical protein 3079 47.62 0 3606596..3607330 + 244 146294190 - Sputcn32_3102 - hypothetical protein 3080 37.29 -2 3607428..3607604 + 58 146294191 - Sputcn32_3103 - hypothetical protein 3081 42.42 0 3607714..3608307 - 197 146294192 - Sputcn32_3104 - putative adenylyl cyclase CyaB 3082 49.14 +1 3608355..3610106 - 583 146294193 - Sputcn32_3105 - cysteine/glutathione ABC transporter membrane/ATP-binding component 3083 44.31 0 3610103..3612034 - 643 146294194 - Sputcn32_3106 - cysteine/glutathione ABC transporter membrane/ATP-binding component 3084 45.92 0 3612229..3613269 - 346 146294195 - Sputcn32_3107 - hypothetical protein 3085 48.82 +1 3613703..3615355 + 550 146294196 - Sputcn32_3108 - DEAD/DEAH box helicase domain-containing protein 3086 45.06 0 3615458..3617026 - 522 146294197 - Sputcn32_3109 - methyl-accepting chemotaxis sensory transducer 3087 49.53 +1 3617304..3618680 - 458 146294198 - Sputcn32_3110 - ATP-dependent RNA helicase DbpA 3088 49.32 +1 3619008..3619895 - 295 146294199 - Sputcn32_3111 - pirin domain-containing protein 3089 41.62 0 3620600..3621130 - 176 146294200 - Sputcn32_3112 - hypothetical protein 3090 45.19 0 3621456..3622079 - 207 146294201 - Sputcn32_3113 - hypothetical protein 3091 41.77 0 3622576..3623037 - 153 146294202 - Sputcn32_3115 - hypothetical protein 3092 45.10 0 3623552..3623755 - 67 146294203 - Sputcn32_3116 - hypothetical protein 3093 48.46 +1 3624008..3625918 + 636 146294204 - Sputcn32_3117 - ABC transporter related 3094 44.85 0 3625930..3626424 + 164 146294205 - Sputcn32_3118 - hypothetical protein 3095 45.26 0 3626462..3626872 - 136 146294206 - Sputcn32_3119 - glutathione-dependent formaldehyde-activating, GFA 44.78 MEAN 3.68 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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