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Shewanella putrefaciens CN-32, complete genome - 1..4659220 3972 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2537 41.89 0 2973408..2974400 - 330 146293648 - Sputcn32_2552 - putative CheW protein 2538 44.19 0 2974384..2975175 - 263 146293649 - Sputcn32_2553 - cobyrinic acid a,c-diamide synthase 2539 42.07 0 2975231..2975665 - 144 146293650 - Sputcn32_2554 - hypothetical protein 2540 47.01 0 2975688..2976806 - 372 146293651 - Sputcn32_2555 - chemotaxis-specific methylesterase 2541 45.28 0 2976827..2979052 - 741 146293652 - Sputcn32_2556 - CheA signal transduction histidine kinase 2542 41.33 0 2979068..2979805 - 245 146293653 - Sputcn32_2557 - chemotaxis phosphatase, CheZ 2543 43.75 0 2979819..2980202 - 127 146293654 - Sputcn32_2558 - response regulator receiver protein 2544 43.56 0 2980250..2980963 - 237 146293655 fliA Sputcn32_2559 - flagellar biosynthesis sigma factor 2545 45.01 0 2980956..2981837 - 293 146293656 - Sputcn32_2560 - cobyrinic acid a,c-diamide synthase 2546 46.28 0 2981842..2983224 - 460 146293657 flhF Sputcn32_2561 - flagellar biosynthesis regulator FlhF 2547 45.52 0 2983236..2985335 - 699 146293658 flhA Sputcn32_2562 - flagellar biosynthesis protein FlhA 2548 44.92 0 2985428..2986558 - 376 146293659 flhB Sputcn32_2563 - flagellar biosynthesis protein FlhB 2549 45.61 0 2986576..2987373 - 265 146293660 fliR Sputcn32_2564 - flagellar biosynthesis protein FliR 2550 41.11 0 2987378..2987647 - 89 146293661 - Sputcn32_2565 - flagellar biosynthetic protein FliQ 2551 42.03 0 2987665..2988411 - 248 146293662 fliP Sputcn32_2566 - flagellar biosynthesis protein FliP 2552 42.86 0 2988408..2988827 - 139 146293663 - Sputcn32_2567 - flagellar biosynthesis protein, FliO 2553 44.79 0 2988854..2989237 - 127 146293664 fliN Sputcn32_2568 - flagellar motor switch protein 2554 44.48 0 2989249..2990280 - 343 146293665 fliM Sputcn32_2569 - flagellar motor switch protein FliM 2555 41.67 0 2990320..2990835 - 171 146293666 fliL Sputcn32_2570 - flagellar basal body-associated protein FliL 2556 43.29 0 2990927..2992402 - 491 146293667 - Sputcn32_2571 - flagellar hook-length control protein 2557 41.89 0 2992569..2993012 - 147 146293668 - Sputcn32_2572 - flagellar export protein FliJ 2558 48.51 +1 2993024..2994361 - 445 146293669 fliI Sputcn32_2573 - flagellum-specific ATP synthase 2559 42.42 0 2994330..2995286 - 318 146293670 fliH Sputcn32_2574 - flagellar assembly protein H 2560 45.08 0 2995273..2996319 - 348 146293671 fliG Sputcn32_2575 - flagellar motor switch protein G 2561 45.75 0 2996312..2997994 - 560 146293672 fliF Sputcn32_2576 - flagellar MS-ring protein 2562 44.94 0 2998040..2998375 - 111 146293673 - Sputcn32_2577 - flagellar hook-basal body complex subunit FliE 2563 44.22 0 2998595..2999935 - 446 146293674 - Sputcn32_2578 - two component, sigma54 specific, Fis family transcriptional regulator 2564 44.60 0 2999928..3001010 - 360 146293675 - Sputcn32_2579 - PAS/PAC sensor signal transduction histidine kinase 2565 43.17 0 3001120..3002553 - 477 146293676 - Sputcn32_2580 - sigma-54 dependent trancsriptional regulator 2566 37.71 -1 3002849..3003259 - 136 146293677 fliS Sputcn32_2581 - flagellar protein FliS 2567 38.63 -1 3003266..3003586 - 106 146293678 - Sputcn32_2582 - hypothetical protein 2568 39.59 -1 3003598..3004971 - 457 146293679 - Sputcn32_2583 - flagellar hook-associated 2 domain-containing protein 2569 41.79 0 3005018..3005407 - 129 146293680 - Sputcn32_2584 - flagellar protein FlaG protein 2570 42.65 0 3005553..3006368 - 271 146293681 - Sputcn32_2585 - flagellin domain-containing protein 2571 43.31 0 3006629..3007450 - 273 146293682 - Sputcn32_2586 - flagellin domain-containing protein 2572 42.99 0 3007553..3008764 - 403 146293683 flgL Sputcn32_2587 - flagellar hook-associated protein FlgL 2573 44.39 0 3008776..3010701 - 641 146293684 - Sputcn32_2588 - flagellar hook-associated protein FlgK 2574 44.47 0 3010742..3011899 - 385 146293685 flgJ Sputcn32_2589 - peptidoglycan hydrolase 2575 44.51 0 3011917..3013008 - 363 146293686 flgI Sputcn32_2590 - flagellar basal body P-ring protein 2576 44.74 0 3013020..3013694 - 224 146293687 flgH Sputcn32_2591 - flagellar basal body L-ring protein 2577 44.87 0 3013706..3014494 - 262 146293688 flgG Sputcn32_2592 - flagellar basal body rod protein FlgG 2578 46.77 0 3014505..3015248 - 247 146293689 flgF Sputcn32_2593 - flagellar basal body rod protein FlgF 2579 45.74 0 3015418..3016779 - 453 146293690 flgE Sputcn32_2594 - flagellar hook protein FlgE 2580 40.81 -1 3016847..3017608 - 253 146293691 flgD Sputcn32_2595 - flagellar basal body rod modification protein 2581 41.25 0 3017633..3018049 - 138 146293692 flgC Sputcn32_2596 - flagellar basal body rod protein FlgC 2582 41.73 0 3018052..3018456 - 134 146293693 flgB Sputcn32_2597 - flagellar basal body rod protein FlgB 2583 41.79 0 3018601..3019440 - 279 146293694 - Sputcn32_2598 - protein-glutamate O-methyltransferase 2584 41.04 -1 3019552..3020472 - 306 146293695 - Sputcn32_2599 - putative CheW protein 2585 39.55 -1 3020677..3021384 + 235 146293696 flgA Sputcn32_2600 - flagellar basal body P-ring biosynthesis protein FlgA 2586 42.90 0 3021458..3021781 + 107 146293697 - Sputcn32_2601 - anti-sigma-28 factor, FlgM 2587 40.85 -1 3021784..3022209 + 141 146293698 - Sputcn32_2602 - FlgN family protein 2588 41.33 0 3022566..3023015 - 149 146293699 - Sputcn32_2603 - hypothetical protein 2589 40.92 -1 3023012..3023644 - 210 146293700 - Sputcn32_2604 - hypothetical protein 2590 41.47 0 3023928..3025094 + 388 146293701 - Sputcn32_2605 - hypothetical protein 2591 38.54 -1 3025436..3026299 + 287 146293702 - Sputcn32_2606 - hypothetical protein 2592 44.89 0 3026489..3026860 + 123 146293703 - Sputcn32_2607 - hypothetical protein 2593 44.55 0 3026860..3027180 + 106 146293704 - Sputcn32_2608 - hypothetical protein 2594 47.22 0 3027173..3029095 + 640 146293705 - Sputcn32_2609 - bacteriophage replication gene A 2595 28.95 -2 3029179..3031413 + 744 146293706 - Sputcn32_2610 - hypothetical protein 2596 27.86 -2 3031547..3032698 + 383 146293707 - Sputcn32_2611 - retron-type reverse transcriptase 2597 46.62 0 3033201..3034532 - 443 146293708 - Sputcn32_2612 - phage integrase family protein 2598 37.13 -2 3034766..3036055 + 429 146293709 - Sputcn32_2613 - hypothetical protein 2599 34.35 -2 3036052..3036345 + 97 146293710 - Sputcn32_2614 - hypothetical protein 2600 34.13 -2 3036394..3037020 - 208 146293711 - Sputcn32_2615 - putative sugar nucleotidyltransferase 2601 30.50 -2 3037017..3037616 - 199 146293712 - Sputcn32_2616 - HAD family hydrolase 2602 32.12 -2 3037626..3038366 - 246 146293713 - Sputcn32_2617 - methyltransferase type 12 2603 31.44 -2 3038382..3039227 - 281 146293714 - Sputcn32_2618 - hypothetical protein 2604 41.31 0 3039220..3040410 - 396 146293715 - Sputcn32_2619 - hypothetical protein 2605 39.77 -1 3040389..3041444 - 351 146293716 - Sputcn32_2620 - acyl-protein synthetase, LuxE 2606 41.63 0 3041441..3042802 - 453 146293717 - Sputcn32_2621 - AMP-dependent synthetase and ligase 2607 40.83 -1 3042835..3043581 - 248 146293718 - Sputcn32_2622 - short-chain dehydrogenase/reductase SDR 2608 39.39 -1 3043581..3043811 - 76 146293719 - Sputcn32_2623 - acyl carrier protein 2609 37.83 -1 3043808..3044407 - 199 146293720 - Sputcn32_2624 - hypothetical protein 2610 42.29 0 3044389..3045438 - 349 146293721 - Sputcn32_2625 - N-acylneuraminate-9-phosphate synthase 2611 39.16 -1 3045442..3046557 - 371 146293722 - Sputcn32_2626 - FlaR protein (FlaR) 2612 41.28 0 3046554..3047258 - 234 146293723 - Sputcn32_2627 - acylneuraminate cytidylyltransferase 2613 40.73 -1 3047255..3048403 - 382 146293724 - Sputcn32_2628 - DegT/DnrJ/EryC1/StrS aminotransferase 2614 41.67 0 3048400..3049395 - 331 146293725 - Sputcn32_2629 - polysaccharide biosynthesis protein CapD 2615 34.06 -2 3049776..3052241 + 821 146293726 - Sputcn32_2630 - hypothetical protein 2616 40.00 -1 3052357..3052836 + 159 146293727 - Sputcn32_2631 - hypothetical protein 2617 42.07 0 3052875..3053435 + 186 146293728 - Sputcn32_2632 - hypothetical protein 2618 42.65 0 3053454..3054398 - 314 146293729 - Sputcn32_2633 - hypothetical protein 2619 45.40 0 3054516..3055145 - 209 146293730 - Sputcn32_2634 - TetR family transcriptional regulator 2620 44.20 0 3055284..3056396 + 370 146293731 - Sputcn32_2635 - RND family efflux transporter MFP subunit 2621 45.06 0 3056396..3059473 + 1025 146293732 - Sputcn32_2636 - acriflavin resistance protein 2622 43.41 0 3059699..3061702 + 667 146293733 - Sputcn32_2637 - methyl-accepting chemotaxis sensory transducer 2623 47.68 0 3061769..3062005 - 78 146293734 - Sputcn32_2638 - hypothetical protein 2624 44.44 0 3062210..3062326 - 38 146293735 - Sputcn32_2639 - cyd operon protein YbgT 2625 45.18 0 3062356..3063495 - 379 146293736 - Sputcn32_2640 - cytochrome d ubiquinol oxidase, subunit II 2626 43.35 0 3063511..3065067 - 518 146293737 - Sputcn32_2641 - cytochrome bd ubiquinol oxidase, subunit I 2627 50.80 +1 3066311..3070192 - 1293 146293738 - Sputcn32_2642 - phosphoribosylformylglycinamidine synthase 2628 45.68 0 3070471..3071904 + 477 146293739 - Sputcn32_2643 - lytic transglycosylase, catalytic 2629 50.51 +1 3072362..3072856 - 164 146293740 - Sputcn32_2644 - CMP/dCMP deaminase, zinc-binding 2630 47.72 0 3073023..3074600 - 525 146293741 guaA Sputcn32_2645 - bifunctional GMP synthase/glutamine amidotransferase protein 2631 47.72 0 3074718..3076184 - 488 146293742 - Sputcn32_2646 - inositol-5-monophosphate dehydrogenase 2632 46.47 0 3076251..3077651 + 466 146293743 xseA Sputcn32_2647 - exodeoxyribonuclease VII large subunit 2633 49.22 +1 3077734..3079200 - 488 146293744 engA Sputcn32_2648 - GTP-binding protein EngA 2634 46.04 0 3079280..3080467 - 395 146293745 - Sputcn32_2649 - outer membrane protein assembly complex subunit YfgL 2635 44.12 0 3080479..3081099 - 206 146293746 - Sputcn32_2650 - hypothetical protein 2636 47.18 0 3081113..3082390 - 425 146293747 - Sputcn32_2651 - histidyl-tRNA synthetase 44.78 MEAN 3.68 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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