version 1.0
Shewanella putrefaciens CN-32, complete genome - 1..4659220 3972 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2355 45.30 0 2739748..2740716 + 322 146293466 - Sputcn32_2370 - cysteine synthase A 2356 44.63 0 2740915..2741994 + 359 146293467 - Sputcn32_2371 - O-methyltransferase family protein 2357 43.78 0 2742126..2743130 + 334 146293468 - Sputcn32_2372 - C4-dicarboxylate transporter/malic acid transport protein 2358 40.64 -1 2743830..2746730 + 966 146293469 - Sputcn32_2373 - TonB-dependent receptor 2359 44.69 0 2746853..2748331 - 492 146293470 - Sputcn32_2374 - hypothetical protein 2360 43.64 0 2748762..2749673 + 303 146293471 - Sputcn32_2375 - LysR family transcriptional regulator 2361 44.92 0 2749753..2751366 - 537 146293472 - Sputcn32_2376 - formate/nitrite transporter 2362 46.71 0 2752283..2753815 + 510 146293473 - Sputcn32_2377 - hypothetical protein 2363 45.03 0 2754460..2756742 + 760 146293474 - Sputcn32_2378 - formate acetyltransferase 2364 44.80 0 2756806..2757546 + 246 146293475 pflA Sputcn32_2379 - pyruvate formate lyase-activating enzyme 1 2365 44.93 0 2757591..2758073 - 160 146293476 - Sputcn32_2380 - hypothetical protein 2366 44.06 0 2758175..2759377 + 400 146293477 - Sputcn32_2381 - acetate kinase 2367 47.86 0 2759496..2761649 + 717 146293478 - Sputcn32_2382 - phosphate acetyltransferase 2368 39.86 -1 2762132..2762560 + 142 146293479 - Sputcn32_2383 - hypothetical protein 2369 41.18 0 2762684..2762887 - 67 146293480 - Sputcn32_2384 - hypothetical protein 2370 44.70 0 2762993..2763907 - 304 146293481 - Sputcn32_2385 - hypothetical protein 2371 41.46 0 2763915..2765021 - 368 146293482 - Sputcn32_2386 - hypothetical protein 2372 41.67 0 2765119..2765490 + 123 146293483 folX Sputcn32_2387 - D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase 2373 45.53 0 2765585..2766478 + 297 146293484 - Sputcn32_2388 - hypothetical protein 2374 42.97 0 2766994..2768217 + 407 146293485 - Sputcn32_2389 - sodium/glutamate symporter 2375 47.28 0 2768276..2770771 - 831 146293486 - Sputcn32_2390 - hypothetical protein 2376 47.22 0 2770774..2771529 - 251 146293487 - Sputcn32_2391 - ABC transporter related 2377 45.50 0 2771582..2772181 + 199 146293488 - Sputcn32_2392 - arylesterase 2378 43.45 0 2772327..2773394 + 355 146293489 - Sputcn32_2393 - hypothetical protein 2379 41.59 0 2773488..2774504 - 338 146293490 - Sputcn32_2394 - putative periplasmic protease 2380 46.46 0 2774628..2777102 - 824 146293491 - Sputcn32_2395 - hypothetical protein 2381 46.61 0 2777364..2778101 + 245 146293492 - Sputcn32_2396 - short chain dehydrogenase 2382 45.44 0 2778149..2779123 - 324 146293493 - Sputcn32_2397 - hypothetical protein 2383 50.46 +1 2779224..2780099 - 291 146293494 - Sputcn32_2398 - pseudouridine synthase 2384 44.56 0 2780092..2780688 - 198 146293495 - Sputcn32_2399 - putative transcriptional regulator 2385 46.01 0 2780692..2781480 - 262 146293496 - Sputcn32_2400 - chromosome segregation and condensation protein ScpA 2386 47.50 0 2781639..2782259 - 206 146293497 - Sputcn32_2401 - Sua5/YciO/YrdC/YwlC family protein 2387 48.66 +1 2782256..2783116 - 286 146293498 - Sputcn32_2402 - phosphotransferase domain-containing protein 2388 49.14 +1 2783532..2785157 + 541 146293499 - Sputcn32_2403 - anthranilate synthase component I 2389 52.57 +2 2785167..2785769 + 200 146293500 - Sputcn32_2404 - anthranilate synthase component II 2390 50.53 +1 2785766..2786812 + 348 146293501 - Sputcn32_2405 - anthranilate phosphoribosyltransferase 2391 49.97 +1 2786819..2788297 + 492 146293502 - Sputcn32_2406 - bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase 2392 50.55 +1 2788410..2789600 + 396 146293503 - Sputcn32_2407 - tryptophan synthase subunit beta 2393 52.69 +2 2789606..2790442 + 278 146293504 trpA Sputcn32_2408 - tryptophan synthase subunit alpha 2394 48.84 +1 2790513..2790944 + 143 146293505 - Sputcn32_2409 - hypothetical protein 2395 44.91 0 2791016..2791300 + 94 146293506 - Sputcn32_2410 - hypothetical protein 2396 45.45 0 2791987..2793504 + 505 146293507 - Sputcn32_2411 - L-lysine 6-monooxygenase (NADPH) 2397 47.54 0 2793504..2794193 + 229 146293508 - Sputcn32_2412 - siderophore biosynthesis protein, putative 2398 47.85 0 2794194..2796122 + 642 146293509 - Sputcn32_2413 - IucA/IucC family protein 2399 49.82 +1 2796219..2798432 + 737 146293510 - Sputcn32_2414 - TonB-dependent siderophore receptor 2400 46.22 0 2798577..2799701 + 374 146293511 - Sputcn32_2415 - ferric iron reductase 2401 39.01 -1 2799921..2800466 + 181 146293512 - Sputcn32_2416 - intracellular septation protein A 2402 47.67 0 2800466..2800765 + 99 146293513 - Sputcn32_2417 - YciI-like protein 2403 47.11 0 2800765..2801577 + 270 146293514 - Sputcn32_2418 - exonuclease III 2404 48.86 +1 2801713..2802150 - 145 146293515 - Sputcn32_2419 - hypothetical protein 2405 43.06 0 2802224..2802655 - 143 146293516 - Sputcn32_2420 - hypothetical protein 2406 35.42 -2 2802762..2803193 - 143 146293517 - Sputcn32_2421 - hypothetical protein 2407 47.01 0 2803553..2805007 - 484 146293518 - Sputcn32_2422 - methyl-accepting chemotaxis sensory transducer 2408 48.17 0 2805135..2805626 - 163 146293519 - Sputcn32_2423 - hypothetical protein 2409 50.42 +1 2806013..2808259 - 748 146293520 - Sputcn32_2424 - aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding 2410 49.01 +1 2808261..2808764 - 167 146293521 - Sputcn32_2425 - 2Fe-2S iron-sulfur cluster binding domain-containing protein 2411 46.85 0 2808768..2809433 - 221 146293522 - Sputcn32_2426 - hypothetical protein 2412 47.30 0 2809442..2810458 - 338 146293523 - Sputcn32_2427 - hypothetical protein 2413 44.50 0 2810700..2811344 - 214 146293524 - Sputcn32_2428 - beta-lactamase domain-containing protein 2414 44.81 0 2811526..2812815 + 429 146293525 - Sputcn32_2429 - alpha/beta hydrolase fold 2415 43.14 0 2813037..2813444 - 135 146293526 - Sputcn32_2430 - tetraheme cytochrome c 2416 43.77 0 2813463..2815100 - 545 146293527 - Sputcn32_2431 - phenylalanine/histidine ammonia-lyase 2417 48.46 0 2815141..2816694 - 517 146293528 - Sputcn32_2432 - flavocytochrome c 2418 42.37 0 2816860..2818386 + 508 146293529 - Sputcn32_2433 - sigma-54 dependent trancsriptional regulator 2419 42.31 0 2818516..2819685 - 389 146293530 - Sputcn32_2434 - porin 2420 46.59 0 2819934..2822060 - 708 146293531 - Sputcn32_2435 - DNA topoisomerase III 2421 36.43 -2 2822223..2822513 + 96 146293532 - Sputcn32_2436 - hypothetical protein 2422 47.00 0 2822616..2824130 - 504 146293533 - Sputcn32_2437 - amidophosphoribosyltransferase 2423 42.33 0 2824262..2824750 - 162 146293534 - Sputcn32_2438 - colicin V production protein 2424 45.51 0 2824865..2825644 - 259 146293535 - Sputcn32_2439 - sporulation domain-containing protein 2425 47.56 0 2825628..2826899 - 423 146293536 - Sputcn32_2440 - FolC bifunctional protein 2426 45.93 0 2826969..2827754 - 261 146293537 - Sputcn32_2441 - tRNA pseudouridine synthase A 2427 44.14 0 2827857..2831150 - 1097 146293538 - Sputcn32_2442 - hypothetical protein 2428 44.74 0 2831328..2832344 - 338 146293539 - Sputcn32_2443 - aspartate-semialdehyde dehydrogenase 2429 47.21 0 2832347..2833477 - 376 146293540 - Sputcn32_2444 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 2430 47.65 0 2833636..2834871 - 411 146293541 - Sputcn32_2445 - beta-ketoacyl synthase 2431 49.68 +1 2834986..2837028 + 680 146293542 - Sputcn32_2446 - FAD dependent oxidoreductase 2432 51.29 +1 2837125..2837898 - 257 146293543 - Sputcn32_2447 - tRNA/rRNA methyltransferase (SpoU) 2433 48.07 0 2837888..2838172 - 94 146293544 - Sputcn32_2448 - hypothetical protein 2434 49.87 +1 2838177..2839355 - 392 146293545 - Sputcn32_2449 - ATP-NAD/AcoX kinase 2435 51.11 +1 2839406..2840581 - 391 146293546 - Sputcn32_2450 - major facilitator transporter 2436 50.23 +1 2840649..2841743 - 364 146293547 - Sputcn32_2451 - chorismate synthase 2437 46.14 0 2841866..2842810 - 314 146293548 - Sputcn32_2452 - N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 2438 47.83 0 2842892..2843422 + 176 146293549 - Sputcn32_2453 - hypothetical protein 2439 46.92 0 2843500..2843970 - 156 146293550 - Sputcn32_2454 - phosphohistidine phosphatase, SixA 2440 42.04 0 2844140..2846929 + 929 146293551 - Sputcn32_2455 - peptidase M16 domain-containing protein 2441 33.98 -2 2847181..2851497 + 1438 146293552 - Sputcn32_2456 - diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) 2442 43.87 0 2851607..2852071 + 154 146293553 - Sputcn32_2457 - hypothetical protein 2443 42.79 0 2852368..2852568 - 66 146293554 - Sputcn32_2458 - hypothetical protein 2444 46.96 0 2852897..2855017 - 706 146293555 fadJ Sputcn32_2459 - multifunctional fatty acid oxidation complex subunit alpha 2445 50.19 +1 2855023..2856333 - 436 146293556 fadI Sputcn32_2460 - 3-ketoacyl-CoA thiolase 2446 50.79 +1 2856545..2857552 + 335 146293557 - Sputcn32_2461 - ATPase 2447 50.42 +1 2857577..2858530 + 317 146293558 - Sputcn32_2462 - hypothetical protein 2448 49.11 +1 2858610..2859173 + 187 146293559 - Sputcn32_2463 - hypothetical protein 2449 47.35 0 2859167..2860186 + 339 146293560 - Sputcn32_2464 - von Willebrand factor, type A 2450 46.39 0 2860186..2862177 + 663 146293561 - Sputcn32_2465 - TPR repeat-containing protein 2451 46.41 0 2862171..2863814 + 547 146293562 - Sputcn32_2466 - hypothetical protein 2452 42.20 0 2863890..2864453 + 187 146293563 - Sputcn32_2467 - RNA polymerase sigma factor 2453 40.00 -1 2864446..2865150 + 234 146293564 - Sputcn32_2468 - hypothetical protein 2454 44.24 0 2865265..2866758 + 497 146293565 - Sputcn32_2469 - sodium/proline symporter 44.78 MEAN 3.68 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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