version 1.0
Shewanella putrefaciens CN-32, complete genome - 1..4659220 3972 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2285 49.33 +1 2650935..2651534 - 199 146293396 - Sputcn32_2300 - recombination protein RecR 2286 46.06 0 2651547..2651876 - 109 146293397 - Sputcn32_2301 - hypothetical protein 2287 47.39 0 2652046..2654919 - 957 146293398 - Sputcn32_2302 - DNA polymerase III, subunits gamma and tau 2288 43.24 0 2655038..2655592 - 184 146293399 - Sputcn32_2303 - adenine phosphoribosyltransferase 2289 42.62 0 2655822..2656187 - 121 146293400 - Sputcn32_2304 - hypothetical protein 2290 32.52 -2 2656269..2656391 - 40 146293401 - Sputcn32_2305 - hypothetical protein 2291 42.17 0 2656540..2657286 - 248 146293402 - Sputcn32_2306 - hypothetical protein 2292 42.64 0 2657286..2658188 - 300 146293403 - Sputcn32_2307 - hypothetical protein 2293 44.28 0 2658268..2658678 - 136 146293404 - Sputcn32_2308 - hypothetical protein 2294 46.12 0 2658923..2659876 + 317 146293405 - Sputcn32_2309 - dihydrouridine synthase, DuS 2295 48.06 0 2660080..2660439 + 119 146293406 - Sputcn32_2310 - TraR/DksA family transcriptional regulator 2296 41.65 0 2660672..2662390 - 572 146293407 ushA Sputcn32_2311 - bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor 2297 46.43 0 2662755..2663426 - 223 146293408 - Sputcn32_2312 - carboxylesterase 2298 49.56 +1 2663515..2663742 - 75 146293409 - Sputcn32_2313 - hypothetical protein 2299 47.06 0 2663994..2665952 + 652 146293410 - Sputcn32_2314 - peptidase M1, membrane alanine aminopeptidase 2300 48.78 +1 2666072..2666563 - 163 146293411 - Sputcn32_2315 - peptidylprolyl isomerase, FKBP-type 2301 45.68 0 2666670..2667989 - 439 146293412 - Sputcn32_2316 - lytic murein transglycosylase 2302 42.22 0 2668196..2668555 + 119 146293413 - Sputcn32_2317 - hypothetical protein 2303 45.23 0 2668607..2669245 + 212 146293414 - Sputcn32_2318 - hypothetical protein 2304 41.69 0 2669340..2670284 - 314 146293415 - Sputcn32_2319 - putative CheW protein 2305 42.72 0 2670548..2671165 - 205 146293416 - Sputcn32_2320 - methyltransferase type 11 2306 41.12 0 2671262..2671813 + 183 146293417 - Sputcn32_2321 - peptidase S16, lon domain-containing protein 2307 40.72 -1 2671948..2672610 + 220 146293418 - Sputcn32_2322 - ECF subfamily RNA polymerase sigma-24 factor 2308 42.94 0 2672603..2673310 + 235 146293419 - Sputcn32_2323 - anti-ECFsigma factor, ChrR 2309 34.43 -2 2673919..2674101 + 60 146293420 - Sputcn32_2324 - hypothetical protein 2310 37.55 -1 2674402..2674662 + 86 146293421 - Sputcn32_2325 - hypothetical protein 2311 44.53 0 2674820..2676292 - 490 146293422 - Sputcn32_2326 - putative nicotinate phosphoribosyltransferase 2312 47.30 0 2676303..2677190 - 295 146293423 - Sputcn32_2327 - ribose-phosphate pyrophosphokinase 2313 43.84 0 2677546..2678259 - 237 146293424 - Sputcn32_2328 - NUDIX hydrolase 2314 45.48 0 2678341..2679369 - 342 146293425 - Sputcn32_2329 - hypothetical protein 2315 47.06 0 2679637..2680044 + 135 146293426 - Sputcn32_2330 - hypothetical protein 2316 41.27 0 2680139..2680516 - 125 146293427 - Sputcn32_2331 - hypothetical protein 2317 41.98 0 2680680..2681315 - 211 146293428 - Sputcn32_2332 - response regulator receiver protein 2318 45.58 0 2682053..2682403 - 116 146293429 - Sputcn32_2333 - cytochrome c3 2319 44.56 0 2682806..2683669 - 287 146293430 - Sputcn32_2334 - heat shock protein HtpX 2320 44.16 0 2683959..2684669 + 236 146293431 - Sputcn32_2335 - peptidase E 2321 40.94 -1 2685026..2686615 + 529 146293432 mdoG Sputcn32_2336 - glucan biosynthesis protein G 2322 38.18 -1 2687240..2688208 + 322 146293433 - Sputcn32_2337 - hypothetical protein 2323 42.76 0 2688547..2689161 + 204 146293434 - Sputcn32_2338 - MotA/TolQ/ExbB proton channel 2324 40.41 -1 2689158..2689496 + 112 146293435 - Sputcn32_2339 - hypothetical protein 2325 44.15 0 2689483..2693439 + 1318 146293436 - Sputcn32_2340 - cobaltochelatase 2326 44.79 0 2693457..2695751 + 764 146293437 - Sputcn32_2341 - TonB-dependent receptor 2327 46.37 0 2695851..2696594 - 247 146293438 bioD Sputcn32_2342 - dithiobiotin synthetase 2328 45.93 0 2696634..2697443 - 269 146293439 - Sputcn32_2343 - biotin biosynthesis protein BioC 2329 48.60 +1 2697582..2698793 - 403 146293440 - Sputcn32_2344 - 8-amino-7-oxononanoate synthase 2330 48.24 0 2698798..2699850 - 350 146293441 - Sputcn32_2345 - biotin synthase 2331 47.58 0 2699974..2701314 + 446 146293442 - Sputcn32_2346 - adenosylmethionine-8-amino-7-oxononanoate aminotransferase 2332 45.44 0 2701548..2703149 + 533 146293443 - Sputcn32_2347 - methyl-accepting chemotaxis sensory transducer 2333 45.67 0 2703205..2706642 - 1145 146293444 - Sputcn32_2348 - integral membrane sensor hybrid histidine kinase 2334 48.85 +1 2706818..2708770 + 650 146293445 - Sputcn32_2349 - acetyl-CoA synthetase 2335 48.37 0 2708918..2710726 + 602 146293446 - Sputcn32_2350 - type III restriction enzyme, res subunit 2336 40.23 -1 2710787..2711047 + 86 146293447 grxA Sputcn32_2351 - glutaredoxin 1 2337 42.42 0 2711228..2711326 + 32 146293448 - Sputcn32_2352 - hypothetical protein 2338 43.30 0 2717503..2718054 - 183 146293449 - Sputcn32_2353 - D,D-heptose 1,7-bisphosphate phosphatase 2339 45.44 0 2718359..2719060 + 233 146293450 - Sputcn32_2354 - GntR family transcriptional regulator 2340 44.60 0 2719153..2720217 + 354 146293451 - Sputcn32_2355 - 3-oxoacyl-(acyl carrier protein) synthase III 2341 45.98 0 2720415..2721086 - 223 146293452 - Sputcn32_2356 - exonuclease, RNase T and DNA polymerase III 2342 43.18 0 2721102..2722949 - 615 146293453 - Sputcn32_2357 - cyclic nucleotide-binding protein 2343 44.85 0 2723092..2724828 - 578 146293454 - Sputcn32_2358 - Na+/solute symporter 2344 38.58 -1 2724840..2725106 - 88 146293455 - Sputcn32_2359 - hypothetical protein 2345 43.43 0 2725722..2726345 - 207 146293456 - Sputcn32_2360 - DSBA oxidoreductase 2346 45.06 0 2726459..2727319 - 286 146293457 - Sputcn32_2361 - NAD-dependent epimerase/dehydratase 2347 44.33 0 2727376..2728584 - 402 146293458 - Sputcn32_2362 - metal dependent phosphohydrolase 2348 41.16 0 2728803..2729300 - 165 146293459 - Sputcn32_2363 - hypothetical protein 2349 48.59 +1 2729465..2731522 - 685 146293460 - Sputcn32_2364 - DNA ligase, NAD-dependent 2350 45.00 0 2731621..2732649 - 342 146293461 - Sputcn32_2365 - cell division protein ZipA 2351 45.64 0 2732673..2736110 - 1145 146293462 - Sputcn32_2366 - chromosome segregation protein SMC 2352 42.56 0 2736308..2737087 + 259 146293463 - Sputcn32_2367 - putative sulfate transport protein CysZ 2353 46.08 0 2737182..2738303 - 373 146293464 - Sputcn32_2368 - 3-oxoacyl-(acyl carrier protein) synthase III 2354 46.20 0 2738300..2739496 - 398 146293465 - Sputcn32_2369 - RDD domain-containing protein 2355 45.30 0 2739748..2740716 + 322 146293466 - Sputcn32_2370 - cysteine synthase A 2356 44.63 0 2740915..2741994 + 359 146293467 - Sputcn32_2371 - O-methyltransferase family protein 2357 43.78 0 2742126..2743130 + 334 146293468 - Sputcn32_2372 - C4-dicarboxylate transporter/malic acid transport protein 2358 40.64 -1 2743830..2746730 + 966 146293469 - Sputcn32_2373 - TonB-dependent receptor 2359 44.69 0 2746853..2748331 - 492 146293470 - Sputcn32_2374 - hypothetical protein 2360 43.64 0 2748762..2749673 + 303 146293471 - Sputcn32_2375 - LysR family transcriptional regulator 2361 44.92 0 2749753..2751366 - 537 146293472 - Sputcn32_2376 - formate/nitrite transporter 2362 46.71 0 2752283..2753815 + 510 146293473 - Sputcn32_2377 - hypothetical protein 2363 45.03 0 2754460..2756742 + 760 146293474 - Sputcn32_2378 - formate acetyltransferase 2364 44.80 0 2756806..2757546 + 246 146293475 pflA Sputcn32_2379 - pyruvate formate lyase-activating enzyme 1 2365 44.93 0 2757591..2758073 - 160 146293476 - Sputcn32_2380 - hypothetical protein 2366 44.06 0 2758175..2759377 + 400 146293477 - Sputcn32_2381 - acetate kinase 2367 47.86 0 2759496..2761649 + 717 146293478 - Sputcn32_2382 - phosphate acetyltransferase 2368 39.86 -1 2762132..2762560 + 142 146293479 - Sputcn32_2383 - hypothetical protein 2369 41.18 0 2762684..2762887 - 67 146293480 - Sputcn32_2384 - hypothetical protein 2370 44.70 0 2762993..2763907 - 304 146293481 - Sputcn32_2385 - hypothetical protein 2371 41.46 0 2763915..2765021 - 368 146293482 - Sputcn32_2386 - hypothetical protein 2372 41.67 0 2765119..2765490 + 123 146293483 folX Sputcn32_2387 - D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase 2373 45.53 0 2765585..2766478 + 297 146293484 - Sputcn32_2388 - hypothetical protein 2374 42.97 0 2766994..2768217 + 407 146293485 - Sputcn32_2389 - sodium/glutamate symporter 2375 47.28 0 2768276..2770771 - 831 146293486 - Sputcn32_2390 - hypothetical protein 2376 47.22 0 2770774..2771529 - 251 146293487 - Sputcn32_2391 - ABC transporter related 2377 45.50 0 2771582..2772181 + 199 146293488 - Sputcn32_2392 - arylesterase 2378 43.45 0 2772327..2773394 + 355 146293489 - Sputcn32_2393 - hypothetical protein 2379 41.59 0 2773488..2774504 - 338 146293490 - Sputcn32_2394 - putative periplasmic protease 2380 46.46 0 2774628..2777102 - 824 146293491 - Sputcn32_2395 - hypothetical protein 2381 46.61 0 2777364..2778101 + 245 146293492 - Sputcn32_2396 - short chain dehydrogenase 2382 45.44 0 2778149..2779123 - 324 146293493 - Sputcn32_2397 - hypothetical protein 2383 50.46 +1 2779224..2780099 - 291 146293494 - Sputcn32_2398 - pseudouridine synthase 2384 44.56 0 2780092..2780688 - 198 146293495 - Sputcn32_2399 - putative transcriptional regulator 44.78 MEAN 3.68 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0