version 1.0
Shewanella putrefaciens CN-32, complete genome - 1..4659220 3972 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2230 45.62 0 2585651..2586724 + 357 146293341 - Sputcn32_2245 - phospho-2-dehydro-3-deoxyheptonate aldolase 2231 46.30 0 2586879..2587310 + 143 146293342 - Sputcn32_2246 - thioesterase superfamily protein 2232 42.68 0 2587532..2588194 + 220 146293343 - Sputcn32_2247 - two component LuxR family transcriptional regulator 2233 42.94 0 2588277..2589254 - 325 146293344 cysB Sputcn32_2248 - transcriptional regulator CysB 2234 42.56 0 2589483..2590262 + 259 146293345 - Sputcn32_2249 - hypothetical protein 2235 45.06 0 2590448..2593090 - 880 146293346 - Sputcn32_2250 - DNA topoisomerase I 2236 43.00 0 2593419..2594753 + 444 146293347 - Sputcn32_2251 - succinylarginine dihydrolase 2237 44.56 0 2594815..2597370 - 851 146293348 - Sputcn32_2252 - Ig domain-containing protein 2238 41.25 0 2597587..2598912 + 441 146293349 - Sputcn32_2253 - sodium:dicarboxylate symporter 2239 40.00 -1 2599080..2599439 + 119 146293350 - Sputcn32_2254 - hypothetical protein 2240 41.93 0 2599610..2600284 + 224 146293351 - Sputcn32_2255 - two component transcriptional regulator 2241 43.04 0 2600275..2601624 + 449 146293352 - Sputcn32_2256 - integral membrane sensor signal transduction histidine kinase 2242 40.23 -1 2601641..2602336 - 231 146293353 - Sputcn32_2257 - prolyl 4-hydroxylase, alpha subunit 2243 42.60 0 2602452..2603714 + 420 146293354 - Sputcn32_2258 - metal dependent phosphohydrolase 2244 41.14 0 2603774..2604721 - 315 146293355 - Sputcn32_2259 - magnesium and cobalt transport protein CorA 2245 42.54 0 2604848..2605249 - 133 146293356 - Sputcn32_2260 - hypothetical protein 2246 41.33 0 2605367..2605816 - 149 146293357 - Sputcn32_2261 - hypothetical protein 2247 47.07 0 2605813..2606547 - 244 146293358 - Sputcn32_2262 - NAD-dependent deacetylase 2248 40.97 -1 2606804..2607235 + 143 146293359 fur Sputcn32_2263 - ferric uptake regulator 2249 42.57 0 2607331..2607828 - 165 146293360 - Sputcn32_2264 - GCN5-related N-acetyltransferase 2250 42.40 0 2607894..2608301 - 135 146293361 - Sputcn32_2265 - GreA/GreB family elongation factor 2251 47.88 0 2608703..2609575 - 290 146293362 - Sputcn32_2266 - succinyl-CoA synthetase, alpha subunit 2252 47.90 0 2609575..2610741 - 388 146293363 sucC Sputcn32_2267 - succinyl-CoA synthetase subunit beta 2253 46.22 0 2610819..2612021 - 400 146293364 - Sputcn32_2268 - 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase 2254 46.42 0 2612053..2614872 - 939 146293365 kgd Sputcn32_2269 - alpha-ketoglutarate decarboxylase 2255 44.77 0 2615088..2615795 - 235 146293366 sdhB Sputcn32_2270 - succinate dehydrogenase iron-sulfur subunit 2256 47.48 0 2615807..2617573 - 588 146293367 sdhA Sputcn32_2271 - succinate dehydrogenase flavoprotein subunit 2257 44.54 0 2617574..2617921 - 115 146293368 - Sputcn32_2272 - putative succinate dehydrogenase, hydrophobic subunit 2258 45.45 0 2617915..2618310 - 131 146293369 - Sputcn32_2273 - succinate dehydrogenase, cytochrome b subunit 2259 45.22 0 2618727..2620013 + 428 146293370 gltA Sputcn32_2274 - type II citrate synthase 2260 42.82 0 2620337..2621401 + 354 146293371 - Sputcn32_2275 - RND family efflux transporter MFP subunit 2261 45.66 0 2621415..2624666 + 1083 146293372 - Sputcn32_2276 - acriflavin resistance protein 2262 45.08 0 2624663..2627710 + 1015 146293373 - Sputcn32_2277 - acriflavin resistance protein 2263 41.67 0 2627791..2628102 - 103 146293374 - Sputcn32_2278 - hypothetical protein 2264 44.95 0 2628423..2628620 + 65 146293375 - Sputcn32_2279 - hypothetical protein 2265 45.68 0 2628715..2630310 - 531 146293376 - Sputcn32_2280 - MATE efflux family protein 2266 41.95 0 2630353..2631222 - 289 146293377 - Sputcn32_2281 - Ion transport protein 2267 43.02 0 2631396..2631911 + 171 146293378 - Sputcn32_2282 - ErfK/YbiS/YcfS/YnhG family protein 2268 44.44 0 2632083..2632748 + 221 146293379 - Sputcn32_2283 - hypothetical protein 2269 40.61 -1 2632826..2633086 + 86 146293380 - Sputcn32_2284 - hypothetical protein 2270 45.54 0 2633194..2634135 - 313 146293381 - Sputcn32_2285 - peptidase M23B 2271 45.69 0 2634193..2635074 - 293 146293382 - Sputcn32_2286 - hypothetical protein 2272 45.61 0 2635575..2636576 + 333 146293383 - Sputcn32_2287 - cytochrome-c peroxidase 2273 45.87 0 2636666..2637694 - 342 146293384 - Sputcn32_2288 - nucleoid-associated protein NdpA 2274 43.84 0 2637772..2637990 + 72 162139379 - Sputcn32_2289 - hypothetical protein 2275 42.10 0 2638054..2639832 + 592 146293386 - Sputcn32_2290 - sulfatase 2276 45.89 0 2639917..2641023 - 368 146293387 - Sputcn32_2291 - NADH:flavin oxidoreductase/NADH oxidase 2277 43.48 0 2641136..2642002 + 288 146293388 - Sputcn32_2292 - LysR family transcriptional regulator 2278 42.68 0 2642563..2643054 + 163 146293389 - Sputcn32_2293 - hypothetical protein 2279 45.25 0 2643132..2643962 - 276 146293390 nadE Sputcn32_2294 - NAD synthetase 2280 45.44 0 2644169..2645473 - 434 146293391 - Sputcn32_2295 - inosine kinase 2281 45.02 0 2645718..2646761 - 347 146293392 - Sputcn32_2296 - ferrochelatase 2282 48.68 +1 2646842..2647486 - 214 146293393 - Sputcn32_2297 - adenylate kinase 2283 43.06 0 2647628..2648491 - 287 146293394 - Sputcn32_2298 - thioredoxin domain-containing protein 2284 47.18 0 2648736..2650649 - 637 146293395 - Sputcn32_2299 - heat shock protein 90 2285 49.33 +1 2650935..2651534 - 199 146293396 - Sputcn32_2300 - recombination protein RecR 2286 46.06 0 2651547..2651876 - 109 146293397 - Sputcn32_2301 - hypothetical protein 2287 47.39 0 2652046..2654919 - 957 146293398 - Sputcn32_2302 - DNA polymerase III, subunits gamma and tau 2288 43.24 0 2655038..2655592 - 184 146293399 - Sputcn32_2303 - adenine phosphoribosyltransferase 2289 42.62 0 2655822..2656187 - 121 146293400 - Sputcn32_2304 - hypothetical protein 2290 32.52 -2 2656269..2656391 - 40 146293401 - Sputcn32_2305 - hypothetical protein 2291 42.17 0 2656540..2657286 - 248 146293402 - Sputcn32_2306 - hypothetical protein 2292 42.64 0 2657286..2658188 - 300 146293403 - Sputcn32_2307 - hypothetical protein 2293 44.28 0 2658268..2658678 - 136 146293404 - Sputcn32_2308 - hypothetical protein 2294 46.12 0 2658923..2659876 + 317 146293405 - Sputcn32_2309 - dihydrouridine synthase, DuS 2295 48.06 0 2660080..2660439 + 119 146293406 - Sputcn32_2310 - TraR/DksA family transcriptional regulator 2296 41.65 0 2660672..2662390 - 572 146293407 ushA Sputcn32_2311 - bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor 2297 46.43 0 2662755..2663426 - 223 146293408 - Sputcn32_2312 - carboxylesterase 2298 49.56 +1 2663515..2663742 - 75 146293409 - Sputcn32_2313 - hypothetical protein 2299 47.06 0 2663994..2665952 + 652 146293410 - Sputcn32_2314 - peptidase M1, membrane alanine aminopeptidase 2300 48.78 +1 2666072..2666563 - 163 146293411 - Sputcn32_2315 - peptidylprolyl isomerase, FKBP-type 2301 45.68 0 2666670..2667989 - 439 146293412 - Sputcn32_2316 - lytic murein transglycosylase 2302 42.22 0 2668196..2668555 + 119 146293413 - Sputcn32_2317 - hypothetical protein 2303 45.23 0 2668607..2669245 + 212 146293414 - Sputcn32_2318 - hypothetical protein 2304 41.69 0 2669340..2670284 - 314 146293415 - Sputcn32_2319 - putative CheW protein 2305 42.72 0 2670548..2671165 - 205 146293416 - Sputcn32_2320 - methyltransferase type 11 2306 41.12 0 2671262..2671813 + 183 146293417 - Sputcn32_2321 - peptidase S16, lon domain-containing protein 2307 40.72 -1 2671948..2672610 + 220 146293418 - Sputcn32_2322 - ECF subfamily RNA polymerase sigma-24 factor 2308 42.94 0 2672603..2673310 + 235 146293419 - Sputcn32_2323 - anti-ECFsigma factor, ChrR 2309 34.43 -2 2673919..2674101 + 60 146293420 - Sputcn32_2324 - hypothetical protein 2310 37.55 -1 2674402..2674662 + 86 146293421 - Sputcn32_2325 - hypothetical protein 2311 44.53 0 2674820..2676292 - 490 146293422 - Sputcn32_2326 - putative nicotinate phosphoribosyltransferase 2312 47.30 0 2676303..2677190 - 295 146293423 - Sputcn32_2327 - ribose-phosphate pyrophosphokinase 2313 43.84 0 2677546..2678259 - 237 146293424 - Sputcn32_2328 - NUDIX hydrolase 2314 45.48 0 2678341..2679369 - 342 146293425 - Sputcn32_2329 - hypothetical protein 2315 47.06 0 2679637..2680044 + 135 146293426 - Sputcn32_2330 - hypothetical protein 2316 41.27 0 2680139..2680516 - 125 146293427 - Sputcn32_2331 - hypothetical protein 2317 41.98 0 2680680..2681315 - 211 146293428 - Sputcn32_2332 - response regulator receiver protein 2318 45.58 0 2682053..2682403 - 116 146293429 - Sputcn32_2333 - cytochrome c3 2319 44.56 0 2682806..2683669 - 287 146293430 - Sputcn32_2334 - heat shock protein HtpX 2320 44.16 0 2683959..2684669 + 236 146293431 - Sputcn32_2335 - peptidase E 2321 40.94 -1 2685026..2686615 + 529 146293432 mdoG Sputcn32_2336 - glucan biosynthesis protein G 2322 38.18 -1 2687240..2688208 + 322 146293433 - Sputcn32_2337 - hypothetical protein 2323 42.76 0 2688547..2689161 + 204 146293434 - Sputcn32_2338 - MotA/TolQ/ExbB proton channel 2324 40.41 -1 2689158..2689496 + 112 146293435 - Sputcn32_2339 - hypothetical protein 2325 44.15 0 2689483..2693439 + 1318 146293436 - Sputcn32_2340 - cobaltochelatase 2326 44.79 0 2693457..2695751 + 764 146293437 - Sputcn32_2341 - TonB-dependent receptor 2327 46.37 0 2695851..2696594 - 247 146293438 bioD Sputcn32_2342 - dithiobiotin synthetase 2328 45.93 0 2696634..2697443 - 269 146293439 - Sputcn32_2343 - biotin biosynthesis protein BioC 2329 48.60 +1 2697582..2698793 - 403 146293440 - Sputcn32_2344 - 8-amino-7-oxononanoate synthase 44.78 MEAN 3.68 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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