version 1.0
Shewanella putrefaciens CN-32, complete genome - 1..4659220 3972 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 174 45.96 0 200699..200983 - 94 146291285 - Sputcn32_0174 - transposase IS3/IS911 family protein 175 44.13 0 201013..201438 - 141 146291286 - Sputcn32_0175 - putative prophage repressor 176 37.36 -2 201597..201944 - 115 146291287 - Sputcn32_0176 - hypothetical protein 177 39.53 -1 201946..202203 - 85 146291288 - Sputcn32_0177 - prevent-host-death family protein 178 54.03 +2 202826..203458 - 210 146291289 - Sputcn32_0178 - phage integrase family protein 179 35.51 -2 203703..204530 - 275 146291290 - Sputcn32_0179 - hypothetical protein 180 42.72 0 204634..205059 - 141 146291291 - Sputcn32_0180 - hypothetical protein 181 42.56 0 205738..206073 + 111 146291292 - Sputcn32_0181 - hypothetical protein 182 45.83 0 206070..206357 + 95 146291293 - Sputcn32_0182 - putative transcriptional regulator 183 42.00 0 206732..207031 - 99 146291294 - Sputcn32_0183 - hypothetical protein 184 41.25 0 207047..207349 - 100 146291295 - Sputcn32_0184 - hypothetical protein 185 44.65 0 207856..208014 + 52 146291296 - Sputcn32_0185 - hypothetical protein 186 47.15 0 208506..209996 + 496 146291297 - Sputcn32_0186 - sulphate transporter 187 47.72 0 210031..210885 + 284 146291298 - Sputcn32_0187 - UspA domain-containing protein 188 42.94 0 210976..211308 + 110 146291299 - Sputcn32_0188 - TraR/DksA family transcriptional regulator 189 43.16 0 211426..212046 - 206 146291300 - Sputcn32_0189 - resolvase domain-containing protein 190 39.46 -1 212216..212476 + 86 146291301 - Sputcn32_0190 - prevent-host-death family protein 191 42.95 0 212476..212787 + 103 146291302 - Sputcn32_0191 - plasmid stabilization system protein 192 41.42 0 212811..215891 + 1026 146291303 - Sputcn32_0192 - transposase Tn3 family protein 193 48.77 +1 215929..216621 + 230 146291304 - Sputcn32_0193 - cointegrate resolution protein T 194 55.39 +2 216839..217246 - 135 146291305 - Sputcn32_0194 - MerR family transcriptional regulator 195 57.08 +2 217342..218238 + 298 146291306 - Sputcn32_0195 - cation efflux system permease, putative 196 49.32 +1 218242..218754 + 170 146291307 - Sputcn32_0196 - lipoprotein signal peptidase 197 59.69 +2 218776..220065 + 429 146291308 - Sputcn32_0197 - transposase, IS204/IS1001/IS1096/IS1165 family protein 198 51.21 +1 220338..221450 - 370 146291309 - Sputcn32_0198 - iron-containing alcohol dehydrogenase 199 49.89 +1 221466..222860 - 464 146291310 - Sputcn32_0199 - aldehyde dehydrogenase 200 49.80 +1 222857..223366 - 169 146291311 - Sputcn32_0200 - hypothetical protein 201 50.90 +1 223399..223677 - 92 146291312 - Sputcn32_0201 - ethanolamine utilization protein EutN/carboxysome structural protein Ccml 202 51.25 +1 223682..224161 - 159 146291313 - Sputcn32_0202 - propanediol utilization 203 50.47 +1 224175..224810 - 211 146291314 - Sputcn32_0203 - propanediol utilization protein 204 52.13 +1 224815..225681 - 288 146291315 - Sputcn32_0204 - microcompartments protein 205 54.30 +2 225709..225999 - 96 146291316 - Sputcn32_0205 - microcompartments protein 206 54.59 +2 226071..226898 - 275 146291317 - Sputcn32_0206 - MIP family channel protein 207 47.12 0 226933..227853 - 306 146291318 - Sputcn32_0207 - glycyl-radical activating family protein 208 50.39 +1 227992..230535 - 847 146291319 - Sputcn32_0208 - pyruvate formate-lyase 209 55.51 +2 230560..231375 - 271 146291320 - Sputcn32_0209 - microcompartments protein 210 49.83 +1 231372..231674 - 100 146291321 - Sputcn32_0210 - microcompartments protein 211 44.02 0 232687..233547 - 286 146291322 - Sputcn32_0211 - PTS system mannose/fructose/sorbose family IID subunit 212 49.00 +1 233558..234355 - 265 146291323 - Sputcn32_0212 - PTS system mannose/fructose/sorbose family IIC subunit 213 39.68 -1 234371..234685 - 104 146291324 - Sputcn32_0213 - PTS system sorbose subfamily IIB component 214 52.60 +2 234751..235674 - 307 146291325 - Sputcn32_0214 - transposase, IS4 family protein 215 56.14 +2 235737..236078 - 113 146291326 - Sputcn32_0215 - IS1 transposase 216 53.99 +2 235997..236272 - 91 146291327 - Sputcn32_0216 - insertion element protein 217 43.62 0 236424..237026 + 200 146291328 - Sputcn32_0217 - phage integrase family protein 218 51.45 +1 237269..238300 + 343 146291329 - Sputcn32_0218 - IS630 orf 219 38.32 -1 238827..239708 - 293 146291330 - Sputcn32_0219 - helix-turn-helix domain-containing protein 220 55.39 +2 239957..240364 - 135 146291331 - Sputcn32_0220 - MerR family transcriptional regulator 221 57.08 +2 240460..241356 + 298 146291332 - Sputcn32_0221 - cation efflux system permease, putative 222 49.32 +1 241360..241872 + 170 146291333 - Sputcn32_0222 - lipoprotein signal peptidase 223 59.77 +2 241894..243183 + 429 146291334 - Sputcn32_0223 - transposase, IS204/IS1001/IS1096/IS1165 family protein 224 44.77 0 243253..243663 + 136 146291335 - Sputcn32_0224 - hypothetical protein 225 50.14 +1 243729..246851 - 1040 146291336 - Sputcn32_0225 - CzcA family heavy metal efflux protein 226 47.18 0 246861..247907 - 348 146291337 - Sputcn32_0226 - biotin/lipoyl attachment domain-containing protein 227 52.93 +2 247986..249230 - 414 146291338 - Sputcn32_0227 - outer membrane efflux protein 228 46.99 0 249282..249647 - 121 146291339 - Sputcn32_0228 - hypothetical protein 229 48.45 0 249734..250639 - 301 146291340 - Sputcn32_0229 - cation efflux system permease, putative 230 42.15 0 250662..251126 + 154 146291341 - Sputcn32_0230 - MerR family transcriptional regulator 231 45.43 0 251158..252066 + 302 146291342 - Sputcn32_0231 - cation diffusion facilitator family transporter 232 48.02 0 252041..252394 + 117 146291343 - Sputcn32_0232 - hypothetical protein 233 41.03 -1 252538..252927 + 129 146291344 - Sputcn32_0233 - hypothetical protein 234 42.58 0 252957..253367 + 136 146291345 - Sputcn32_0234 - hypothetical protein 235 46.47 0 253541..254446 - 301 146291346 - Sputcn32_0235 - hypothetical protein 236 39.67 -1 254455..254817 - 120 146291347 - Sputcn32_0236 - hypothetical protein 237 49.70 +1 254905..255900 - 331 146291348 - Sputcn32_0237 - phage integrase family protein 238 48.89 +1 255998..256582 - 194 146291349 - Sputcn32_0238 - hypothetical protein 239 48.82 +1 256659..257336 - 225 146291350 - Sputcn32_0239 - hypothetical protein 240 47.24 0 257841..258257 - 138 146291351 - Sputcn32_0240 - hypothetical protein 241 43.51 0 258257..258649 - 130 146291352 - Sputcn32_0241 - hypothetical protein 242 45.08 0 258732..260468 - 578 146291353 - Sputcn32_0242 - hypothetical protein 243 48.76 +1 261081..261644 - 187 146291354 - Sputcn32_0243 - ISSod10, transposase OrfB 244 49.17 +1 261628..262107 - 159 146291355 - Sputcn32_0244 - ISSod10, transposase OrfA 245 40.85 -1 262745..263848 - 367 146291356 - Sputcn32_0246 - transposase, IS4 family protein 246 39.24 -1 264071..264493 + 140 146291357 - Sputcn32_0247 - hypothetical protein 247 42.83 0 264630..265145 + 171 146291358 - Sputcn32_0248 - hypothetical protein 248 45.57 0 265142..267160 + 672 146291359 - Sputcn32_0249 - CopA family copper resistance protein 249 44.40 0 267172..267885 + 237 146291360 - Sputcn32_0250 - copper resistance B precursor 250 45.63 0 268001..268423 + 140 146291361 - Sputcn32_0251 - copper resistance protein CopC 251 40.69 -1 268438..269334 + 298 146291362 - Sputcn32_0252 - copper resistance D domain-containing protein 252 41.89 0 269410..269853 + 147 146291363 - Sputcn32_0253 - putative orphan protein 253 31.52 -2 270036..270587 - 183 146291364 - Sputcn32_0254 - hypothetical protein 254 33.58 -2 271015..272235 + 406 146291365 - Sputcn32_0255 - outer membrane porin 255 45.39 0 272702..272983 + 93 146291366 - Sputcn32_0256 - hypothetical protein 256 50.00 +1 273165..274640 - 491 146291367 - Sputcn32_0257 - sensor kinase CusS 257 51.54 +1 274633..275313 - 226 146291368 - Sputcn32_0258 - DNA-binding transcriptional activator CusR 258 51.88 +1 275503..276888 + 461 146291369 - Sputcn32_0259 - copper/silver efflux system outer membrane protein CusC 259 45.20 0 276917..277270 + 117 146291370 - Sputcn32_0260 - periplasmic copper-binding protein 260 47.64 0 277384..278676 + 430 146291371 - Sputcn32_0261 - copper/silver efflux system membrane fusion protein CusB 261 52.18 +2 278687..281833 + 1048 146291372 - Sputcn32_0262 - CzcA family heavy metal efflux protein 262 49.77 +1 281929..282360 + 143 146291373 - Sputcn32_0263 - hypothetical protein 263 54.08 +2 282487..284934 + 815 146291374 - Sputcn32_0264 - heavy metal translocating P-type ATPase 264 49.49 +1 284975..285172 + 65 146291375 - Sputcn32_0265 - hypothetical protein 265 47.29 0 285206..285943 - 245 146291376 - Sputcn32_0266 - peptidase M23B 266 44.22 0 286232..286681 - 149 146291377 - Sputcn32_0267 - hypothetical protein 267 39.60 -1 287569..287919 - 116 146291378 - Sputcn32_0269 - plastocyanin domain-containing protein 268 44.01 0 287930..290176 - 748 146291379 - Sputcn32_0270 - copper-translocating P-type ATPase 269 35.03 -2 290176..290646 - 156 146291380 - Sputcn32_0271 - MerR family transcriptional regulator 270 34.94 -2 290767..291201 - 144 146291381 - Sputcn32_0272 - hypothetical protein 271 35.07 -2 291293..291637 - 114 146291382 - Sputcn32_0273 - hypothetical protein 272 42.44 0 292164..293228 - 354 146291383 - Sputcn32_0275 - RNA-directed DNA polymerase (Reverse transcriptase) 273 44.36 0 293225..294058 - 277 146291384 - Sputcn32_0276 - integrase catalytic subunit 44.78 MEAN 3.68 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0