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Shewanella putrefaciens CN-32, complete genome - 1..4659220 3972 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2166 51.37 +1 2509817..2510908 + 363 146293277 - Sputcn32_2181 - imidazole glycerol-phosphate dehydratase/histidinol phosphatase 2167 49.15 +1 2510940..2511767 + 275 146293278 hisH Sputcn32_2182 - imidazole glycerol phosphate synthase subunit HisH 2168 49.19 +1 2511838..2512575 + 245 146293279 - Sputcn32_2183 - 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 2169 50.90 +1 2512557..2513330 + 257 146293280 - Sputcn32_2184 - imidazole glycerol phosphate synthase subunit HisF 2170 47.98 0 2513469..2514110 + 213 146293281 - Sputcn32_2185 - bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein 2171 51.26 +1 2514628..2515815 + 395 146293282 - Sputcn32_2186 - aromatic amino acid transporter 2172 45.69 0 2516119..2519445 + 1108 146293283 - Sputcn32_2187 - hypothetical protein 2173 39.73 -1 2519459..2519677 + 72 146293284 - Sputcn32_2188 - hypothetical protein 2174 46.99 0 2519703..2520068 + 121 146293285 - Sputcn32_2189 - hypothetical protein 2175 36.45 -2 2520384..2520896 - 170 146293286 - Sputcn32_2190 - hypothetical protein 2176 45.45 0 2520969..2521298 - 109 146293287 - Sputcn32_2191 - hypothetical protein 2177 41.94 0 2521482..2521574 + 30 146293288 - Sputcn32_2192 - RelB protein 2178 41.76 0 2521646..2522179 - 177 146293289 - Sputcn32_2193 - hypothetical protein 2179 41.18 0 2522380..2523399 - 339 146293290 - Sputcn32_2194 - dihydroorotate dehydrogenase 2 2180 45.08 0 2523462..2528306 - 1614 146293291 - Sputcn32_2195 - NAD-glutamate dehydrogenase 2181 44.26 0 2528571..2530886 - 771 146293292 - Sputcn32_2196 - hypothetical protein 2182 42.60 0 2530919..2531932 - 337 146293293 - Sputcn32_2197 - BNR repeat-containing protein 2183 44.18 0 2531986..2533350 - 454 146293294 - Sputcn32_2198 - hypothetical protein 2184 43.47 0 2533364..2535406 - 680 146293295 - Sputcn32_2199 - hypothetical protein 2185 38.03 -1 2535745..2535978 - 77 146293296 - Sputcn32_2200 - hypothetical protein 2186 42.47 0 2536006..2538555 - 849 146293297 - Sputcn32_2201 - aminopeptidase N 2187 41.84 0 2538638..2540683 - 681 146293298 - Sputcn32_2202 - carboxy-terminal protease 2188 42.99 0 2540712..2541353 - 213 146293299 - Sputcn32_2203 - putative solute/DNA competence effector 2189 44.01 0 2541633..2542091 - 152 146293300 - Sputcn32_2204 - putative GAF sensor protein 2190 42.33 0 2542110..2542409 - 99 146293301 - Sputcn32_2205 - YebG family protein 2191 41.55 0 2542617..2543249 + 210 146293302 - Sputcn32_2206 - paraquat-inducible protein A 2192 44.55 0 2543236..2543868 + 210 146293303 - Sputcn32_2207 - paraquat-inducible protein A 2193 43.61 0 2543855..2546500 + 881 146293304 - Sputcn32_2208 - hypothetical protein 2194 45.72 0 2546597..2547823 - 408 146293305 - Sputcn32_2209 - nucleoside recognition domain-containing protein 2195 45.26 0 2547988..2549505 + 505 146293306 yebU Sputcn32_2210 - rRNA (cytosine-C(5)-)-methyltransferase RsmF 2196 45.43 0 2549812..2550654 - 280 146293307 - Sputcn32_2211 - TatD family hydrolase 2197 45.57 0 2550700..2551026 - 108 146293308 - Sputcn32_2212 - type IV pilus biogenesis protein PilZ 2198 45.77 0 2551033..2551989 - 318 146293309 - Sputcn32_2213 - DNA polymerase III, delta prime subunit 2199 47.53 0 2551983..2552609 - 208 146293310 - Sputcn32_2214 - dTMP kinase 2200 44.70 0 2552632..2553669 - 345 146293311 - Sputcn32_2215 - aminodeoxychorismate lyase 2201 44.32 0 2553666..2554475 - 269 146293312 - Sputcn32_2216 - aminotransferase, class IV 2202 48.28 0 2554481..2555062 - 193 146293313 dcd Sputcn32_2217 - deoxycytidine triphosphate deaminase 2203 41.78 0 2555094..2555732 - 212 146293314 - Sputcn32_2218 - uridine kinase 2204 48.04 0 2555744..2556865 - 373 146293315 - Sputcn32_2219 - ATP-binding Mrp/Nbp35 family protein 2205 48.26 0 2557020..2559089 + 689 146293316 metG Sputcn32_2220 - methionyl-tRNA synthetase 2206 48.17 0 2559179..2560135 + 318 146293317 - Sputcn32_2221 - auxin efflux carrier 2207 48.47 +1 2560197..2560949 - 250 146293318 - Sputcn32_2222 - hypothetical protein 2208 46.50 0 2560993..2561463 - 156 146293319 - Sputcn32_2223 - 17 kDa surface antigen 2209 42.76 0 2561518..2562228 + 236 146293320 aat Sputcn32_2224 - leucyl/phenylalanyl-tRNA--protein transferase 2210 44.49 0 2562218..2562925 + 235 146293321 - Sputcn32_2225 - arginyl-tRNA-protein transferase 2211 45.21 0 2563017..2563235 + 72 146293322 - Sputcn32_2226 - translation initiation factor IF-1 2212 47.00 0 2563351..2565618 - 755 146293323 - Sputcn32_2227 - ATP-dependent Clp protease, ATP-binding subunit clpA 2213 39.81 -1 2565662..2565970 - 102 146293324 - Sputcn32_2228 - ATP-dependent Clp protease adaptor protein ClpS 2214 43.48 0 2566164..2566370 + 68 146293325 - Sputcn32_2229 - cold-shock DNA-binding domain-containing protein 2215 48.25 0 2566691..2568916 - 741 146293326 - Sputcn32_2230 - isocitrate dehydrogenase, NADP-dependent 2216 45.88 0 2569233..2570045 + 270 146293327 - Sputcn32_2231 - pseudouridylate synthase 2217 48.89 +1 2570113..2570607 + 164 146293328 - Sputcn32_2232 - NUDIX hydrolase 2218 47.63 0 2570820..2571938 + 372 146293329 trmU Sputcn32_2233 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 2219 47.25 0 2571942..2572559 + 205 146293330 - Sputcn32_2234 - hypothetical protein 2220 46.24 0 2572589..2573959 + 456 146293331 - Sputcn32_2235 - adenylosuccinate lyase 2221 47.72 0 2574112..2575251 + 379 146293332 - Sputcn32_2236 - cupin 4 family protein 2222 46.44 0 2575430..2575879 - 149 146293333 - Sputcn32_2237 - hypothetical protein 2223 47.34 0 2576160..2577194 + 344 146293334 - Sputcn32_2238 - Glu/Leu/Phe/Val dehydrogenase, dimerisation region 2224 44.06 0 2577386..2577730 + 114 146293335 - Sputcn32_2239 - hypothetical protein 2225 40.72 -1 2577867..2578340 - 157 146293336 - Sputcn32_2240 - MarR family transcriptional regulator 2226 44.51 0 2578428..2578901 - 157 146293337 - Sputcn32_2241 - hypothetical protein 2227 46.81 0 2579023..2582064 - 1013 146293338 - Sputcn32_2242 - FAD linked oxidase domain-containing protein 2228 46.58 0 2582162..2584531 - 789 146293339 - Sputcn32_2243 - phosphoenolpyruvate synthase 2229 39.98 -1 2584656..2585468 + 270 146293340 - Sputcn32_2244 - hypothetical protein 2230 45.62 0 2585651..2586724 + 357 146293341 - Sputcn32_2245 - phospho-2-dehydro-3-deoxyheptonate aldolase 2231 46.30 0 2586879..2587310 + 143 146293342 - Sputcn32_2246 - thioesterase superfamily protein 2232 42.68 0 2587532..2588194 + 220 146293343 - Sputcn32_2247 - two component LuxR family transcriptional regulator 2233 42.94 0 2588277..2589254 - 325 146293344 cysB Sputcn32_2248 - transcriptional regulator CysB 2234 42.56 0 2589483..2590262 + 259 146293345 - Sputcn32_2249 - hypothetical protein 2235 45.06 0 2590448..2593090 - 880 146293346 - Sputcn32_2250 - DNA topoisomerase I 2236 43.00 0 2593419..2594753 + 444 146293347 - Sputcn32_2251 - succinylarginine dihydrolase 2237 44.56 0 2594815..2597370 - 851 146293348 - Sputcn32_2252 - Ig domain-containing protein 2238 41.25 0 2597587..2598912 + 441 146293349 - Sputcn32_2253 - sodium:dicarboxylate symporter 2239 40.00 -1 2599080..2599439 + 119 146293350 - Sputcn32_2254 - hypothetical protein 2240 41.93 0 2599610..2600284 + 224 146293351 - Sputcn32_2255 - two component transcriptional regulator 2241 43.04 0 2600275..2601624 + 449 146293352 - Sputcn32_2256 - integral membrane sensor signal transduction histidine kinase 2242 40.23 -1 2601641..2602336 - 231 146293353 - Sputcn32_2257 - prolyl 4-hydroxylase, alpha subunit 2243 42.60 0 2602452..2603714 + 420 146293354 - Sputcn32_2258 - metal dependent phosphohydrolase 2244 41.14 0 2603774..2604721 - 315 146293355 - Sputcn32_2259 - magnesium and cobalt transport protein CorA 2245 42.54 0 2604848..2605249 - 133 146293356 - Sputcn32_2260 - hypothetical protein 2246 41.33 0 2605367..2605816 - 149 146293357 - Sputcn32_2261 - hypothetical protein 2247 47.07 0 2605813..2606547 - 244 146293358 - Sputcn32_2262 - NAD-dependent deacetylase 2248 40.97 -1 2606804..2607235 + 143 146293359 fur Sputcn32_2263 - ferric uptake regulator 2249 42.57 0 2607331..2607828 - 165 146293360 - Sputcn32_2264 - GCN5-related N-acetyltransferase 2250 42.40 0 2607894..2608301 - 135 146293361 - Sputcn32_2265 - GreA/GreB family elongation factor 2251 47.88 0 2608703..2609575 - 290 146293362 - Sputcn32_2266 - succinyl-CoA synthetase, alpha subunit 2252 47.90 0 2609575..2610741 - 388 146293363 sucC Sputcn32_2267 - succinyl-CoA synthetase subunit beta 2253 46.22 0 2610819..2612021 - 400 146293364 - Sputcn32_2268 - 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase 2254 46.42 0 2612053..2614872 - 939 146293365 kgd Sputcn32_2269 - alpha-ketoglutarate decarboxylase 2255 44.77 0 2615088..2615795 - 235 146293366 sdhB Sputcn32_2270 - succinate dehydrogenase iron-sulfur subunit 2256 47.48 0 2615807..2617573 - 588 146293367 sdhA Sputcn32_2271 - succinate dehydrogenase flavoprotein subunit 2257 44.54 0 2617574..2617921 - 115 146293368 - Sputcn32_2272 - putative succinate dehydrogenase, hydrophobic subunit 2258 45.45 0 2617915..2618310 - 131 146293369 - Sputcn32_2273 - succinate dehydrogenase, cytochrome b subunit 2259 45.22 0 2618727..2620013 + 428 146293370 gltA Sputcn32_2274 - type II citrate synthase 2260 42.82 0 2620337..2621401 + 354 146293371 - Sputcn32_2275 - RND family efflux transporter MFP subunit 2261 45.66 0 2621415..2624666 + 1083 146293372 - Sputcn32_2276 - acriflavin resistance protein 2262 45.08 0 2624663..2627710 + 1015 146293373 - Sputcn32_2277 - acriflavin resistance protein 2263 41.67 0 2627791..2628102 - 103 146293374 - Sputcn32_2278 - hypothetical protein 2264 44.95 0 2628423..2628620 + 65 146293375 - Sputcn32_2279 - hypothetical protein 2265 45.68 0 2628715..2630310 - 531 146293376 - Sputcn32_2280 - MATE efflux family protein 44.78 MEAN 3.68 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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