version 1.0
Shewanella putrefaciens CN-32, complete genome - 1..4659220 3972 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1985 45.05 0 2286431..2287420 + 329 146293096 - Sputcn32_2000 - putative DNA-binding transcriptional regulator 1986 40.76 -1 2287659..2288318 + 219 146293097 - Sputcn32_2001 - hypothetical protein 1987 43.59 0 2288379..2288768 + 129 146293098 - Sputcn32_2002 - DsrE family protein 1988 42.58 0 2288783..2289139 + 118 146293099 - Sputcn32_2003 - DsrE family protein 1989 41.13 0 2289139..2289420 + 93 146293100 - Sputcn32_2004 - DsrH family protein 1990 43.95 0 2289414..2289752 + 112 146293101 - Sputcn32_2005 - DsrC family protein 1991 39.84 -1 2289858..2289980 - 40 146293102 - Sputcn32_2006 - hypothetical protein 1992 44.91 0 2289998..2291284 - 428 146293103 - Sputcn32_2007 - seryl-tRNA synthetase 1993 38.67 -1 2291303..2291677 - 124 146293104 - Sputcn32_2008 - CrcB protein 1994 46.47 0 2291670..2293001 - 443 146293105 - Sputcn32_2009 - recombination factor protein RarA 1995 39.55 -1 2293010..2293636 - 208 146293106 - Sputcn32_2010 - outer membrane lipoprotein carrier protein LolA 1996 44.44 0 2293713..2296403 - 896 146293107 - Sputcn32_2011 - cell divisionFtsK/SpoIIIE 1997 39.64 -1 2296733..2297239 - 168 146293108 - Sputcn32_2012 - leucine-responsive transcriptional regulator 1998 45.97 0 2297419..2298534 + 371 146293109 - Sputcn32_2013 - alanine dehydrogenase 1999 46.75 0 2298788..2299741 + 317 146293110 - Sputcn32_2014 - thioredoxin reductase 2000 43.14 0 2299991..2300347 - 118 146293111 rplT Sputcn32_2015 - 50S ribosomal protein L20 2001 41.03 -1 2300364..2300558 - 64 146293112 rpmI Sputcn32_2016 - 50S ribosomal protein L35 2002 43.98 0 2300642..2301073 - 143 146293113 - Sputcn32_2017 - translation initiation factor IF-3 2003 45.57 0 2301188..2303116 - 642 146293114 - Sputcn32_2018 - threonyl-tRNA synthetase 2004 40.30 -1 2303517..2303717 + 66 146293115 - Sputcn32_2019 - hypothetical protein 2005 40.63 -1 2303714..2304343 - 209 146293116 - Sputcn32_2020 - riboflavin synthase subunit alpha 2006 45.43 0 2304378..2305757 + 459 146293117 - Sputcn32_2021 - MATE efflux family protein 2007 38.89 -1 2305757..2306008 + 83 146293118 - Sputcn32_2022 - hypothetical protein 2008 39.86 -1 2306746..2307297 + 183 146293119 - Sputcn32_2023 - ecotin precursor 2009 36.23 -2 2307378..2307653 - 91 146293120 - Sputcn32_2024 - hypothetical protein 2010 41.21 0 2307672..2309651 - 659 146293121 - Sputcn32_2025 - ATP-dependent DNA helicase RecQ 2011 40.12 -1 2309863..2310186 - 107 146293122 - Sputcn32_2026 - hypothetical protein 2012 44.61 0 2310441..2312498 + 685 146293123 - Sputcn32_2027 - hypothetical protein 2013 46.04 0 2312593..2313363 - 256 146293124 - Sputcn32_2028 - DTW domain-containing protein 2014 45.65 0 2313524..2314708 + 394 146293125 ampC Sputcn32_2029 - beta-lactamase 2015 43.18 0 2315052..2316320 + 422 146293126 emrD Sputcn32_2030 - multidrug resistance protein D 2016 41.86 0 2316377..2317690 - 437 146293127 pssA Sputcn32_2031 - phosphatidylserine synthase 2017 41.74 0 2317702..2318034 - 110 146293128 - Sputcn32_2032 - hypothetical protein 2018 35.59 -2 2318334..2318510 + 58 146293129 - Sputcn32_2033 - hypothetical protein 2019 42.38 0 2318536..2320050 + 504 146293130 - Sputcn32_2034 - D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 2020 46.19 0 2320116..2321873 - 585 146293131 - Sputcn32_2035 - acyl-CoA dehydrogenase domain-containing protein 2021 40.52 -1 2322088..2322630 - 180 146293132 - Sputcn32_2036 - hypothetical protein 2022 46.35 0 2322701..2323522 - 273 146293133 - Sputcn32_2037 - short chain dehydrogenase 2023 46.84 0 2323574..2324269 - 231 146293134 - Sputcn32_2038 - orotidine 5'-phosphate decarboxylase 2024 42.64 0 2324315..2325475 - 386 146293135 - Sputcn32_2039 - hypothetical protein 2025 40.94 -1 2325477..2325752 - 91 146293136 - Sputcn32_2040 - hypothetical protein 2026 48.96 +1 2325875..2326162 - 95 146293137 - Sputcn32_2041 - integration host factor, beta subunit 2027 44.42 0 2326238..2327905 - 555 146293138 rpsA Sputcn32_2042 - 30S ribosomal protein S1 2028 45.89 0 2328009..2328701 - 230 146293139 - Sputcn32_2043 - cytidylate kinase 2029 48.87 +1 2328887..2330167 - 426 146293140 - Sputcn32_2044 - 3-phosphoshikimate 1-carboxyvinyltransferase 2030 47.02 0 2330603..2331793 + 396 146293141 - Sputcn32_2045 - aromatic amino acid aminotransferase 2031 41.91 0 2331841..2332749 - 302 146293142 - Sputcn32_2046 - SMP-30/gluconolaconase/LRE domain-containing protein 2032 43.01 0 2332911..2336249 - 1112 146293143 - Sputcn32_2047 - glycoside hydrolase family protein 2033 42.50 0 2336822..2339656 + 944 146293144 - Sputcn32_2048 - TonB-dependent receptor 2034 45.88 0 2339911..2340675 + 254 146293145 - Sputcn32_2049 - hypothetical protein 2035 48.17 0 2340898..2342784 - 628 146293146 - Sputcn32_2050 - Alpha-N-arabinofuranosidase 2036 44.79 0 2342787..2343860 - 357 146293147 - Sputcn32_2051 - arabinan endo-1,5-alpha-L-arabinosidase 2037 43.57 0 2344074..2345489 + 471 146293148 - Sputcn32_2052 - sugar (glycoside-Pentoside-hexuronide) transporter 2038 45.36 0 2345517..2346464 + 315 146293149 - Sputcn32_2053 - Alpha-N-arabinofuranosidase 2039 43.40 0 2346523..2348142 - 539 146293150 - Sputcn32_2054 - methyl-accepting chemotaxis sensory transducer 2040 45.59 0 2348364..2349473 - 369 146293151 - Sputcn32_2055 - Alpha-N-arabinofuranosidase 2041 45.17 0 2349448..2350410 - 320 146293152 - Sputcn32_2056 - inner membrane ABC transporter permease protein YjfF 2042 45.49 0 2350407..2351525 - 372 146293153 - Sputcn32_2057 - inner-membrane translocator 2043 46.47 0 2351526..2353025 - 499 146293154 - Sputcn32_2058 - ABC transporter related 2044 46.18 0 2353059..2354000 - 313 146293155 - Sputcn32_2059 - periplasmic binding protein/LacI transcriptional regulator 2045 37.78 -1 2354124..2355179 - 351 146293156 - Sputcn32_2060 - aldose 1-epimerase 2046 43.06 0 2355282..2356052 - 256 146293157 - Sputcn32_2061 - short-chain dehydrogenase/reductase SDR 2047 45.67 0 2356112..2357845 - 577 146293158 - Sputcn32_2062 - dihydroxy-acid dehydratase 2048 41.67 0 2358050..2358985 + 311 146293159 - Sputcn32_2063 - glycoside hydrolase family protein 2049 45.61 0 2359059..2359775 - 238 146293160 - Sputcn32_2064 - GntR domain-containing protein 2050 46.86 0 2359979..2360584 - 201 146293161 - Sputcn32_2065 - beta-phosphoglucomutase family hydrolase 2051 46.51 0 2360692..2362209 - 505 146293162 - Sputcn32_2066 - L-arabinose isomerase 2052 45.40 0 2362240..2362935 - 231 146293163 araD Sputcn32_2067 - L-ribulose-5-phosphate 4-epimerase 2053 47.49 0 2362937..2364610 - 557 146293164 - Sputcn32_2068 - ribulokinase 2054 43.86 0 2364950..2366041 - 363 146293165 - Sputcn32_2069 - phosphoserine aminotransferase 2055 47.31 0 2366144..2368897 - 917 146293166 - Sputcn32_2070 - DNA gyrase, A subunit 2056 44.02 0 2369282..2369992 + 236 146293167 - Sputcn32_2071 - 3-demethylubiquinone-9 3-methyltransferase 2057 49.63 +1 2369994..2370662 + 222 146293168 - Sputcn32_2072 - HAD family hydrolase 2058 44.69 0 2371056..2373344 + 762 146293169 - Sputcn32_2073 - ribonucleotide-diphosphate reductase subunit alpha 2059 42.44 0 2373409..2374539 + 376 146293170 nrdB Sputcn32_2074 - ribonucleotide-diphosphate reductase subunit beta 2060 52.41 +2 2374551..2375006 + 151 146293171 - Sputcn32_2075 - ferredoxin 2061 45.96 0 2375038..2375520 - 160 146293172 - Sputcn32_2076 - YCII domain-containing protein 2062 48.09 0 2375681..2377699 - 672 146293173 - Sputcn32_2077 - NADH:flavin oxidoreductase/NADH oxidase 2063 43.89 0 2377865..2379712 + 615 146293174 - Sputcn32_2078 - signal peptide peptidase SppA, 67K type 2064 44.08 0 2379852..2380865 + 337 146293175 ansA Sputcn32_2079 - cytoplasmic asparaginase I 2065 47.12 0 2381039..2383222 - 727 146293176 - Sputcn32_2080 - glucosyltransferase MdoH 2066 45.81 0 2383246..2384880 - 544 146293177 mdoG Sputcn32_2081 - glucan biosynthesis protein G 2067 41.58 0 2385329..2386723 - 464 146293178 - Sputcn32_2082 - integral membrane sensor signal transduction histidine kinase 2068 41.21 0 2386795..2387454 - 219 146293179 - Sputcn32_2083 - two component transcriptional regulator 2069 44.44 0 2387465..2388292 - 275 146293180 - Sputcn32_2084 - ApbE family lipoprotein 2070 43.94 0 2388531..2389850 - 439 146293181 - Sputcn32_2085 - hypothetical protein 2071 45.21 0 2389929..2390147 - 72 146293182 - Sputcn32_2086 - putative lipoprotein 2072 44.87 0 2390151..2390618 - 155 146293183 - Sputcn32_2087 - redoxin domain-containing protein 2073 48.46 +1 2390983..2392119 + 378 146293184 - Sputcn32_2088 - hydrogenase (NiFe) small subunit HydA 2074 47.01 0 2392123..2393826 + 567 146293185 - Sputcn32_2089 - nickel-dependent hydrogenase, large subunit 2075 43.41 0 2393846..2394520 + 224 146293186 - Sputcn32_2090 - Ni/Fe-hydrogenase, b-type cytochrome subunit 2076 44.86 0 2394528..2395091 + 187 146293187 - Sputcn32_2091 - hydrogenase expression/formation protein 2077 45.09 0 2395072..2396925 + 617 146293188 - Sputcn32_2092 - hypothetical protein 2078 46.92 0 2396956..2399361 + 801 146293189 - Sputcn32_2093 - (NiFe) hydrogenase maturation protein HypF 2079 42.62 0 2399585..2401210 + 541 146293190 - Sputcn32_2094 - sodium/hydrogen exchanger 2080 39.88 -1 2401241..2402203 + 320 146293191 - Sputcn32_2095 - UspA domain-containing protein 2081 39.93 -1 2402272..2403378 - 368 146293192 - Sputcn32_2096 - diguanylate cyclase 2082 40.53 -1 2403446..2405071 - 541 146293193 - Sputcn32_2097 - sulfatase 2083 44.44 0 2405360..2407465 - 701 146293194 - Sputcn32_2098 - prolyl oligopeptidase 2084 46.89 0 2407677..2408126 - 149 146293195 - Sputcn32_2099 - MarR family transcriptional regulator 44.78 MEAN 3.68 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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