version 1.0
Shewanella putrefaciens CN-32, complete genome - 1..4659220 3972 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1781 45.26 0 2037683..2038462 + 259 146292892 - Sputcn32_1792 - glutamine amidotransferase, class-II 1782 41.98 0 2038627..2039517 - 296 146292893 - Sputcn32_1793 - hypothetical protein 1783 43.90 0 2039625..2040050 - 141 146292894 - Sputcn32_1794 - methylated-DNA-(protein)-cysteine S-methyltransferase 1784 42.07 0 2040319..2040810 + 163 146292895 def Sputcn32_1795 - peptide deformylase 1785 43.85 0 2041041..2041886 + 281 146292896 - Sputcn32_1796 - hypothetical protein 1786 36.73 -2 2042029..2042469 + 146 146292897 - Sputcn32_1797 - hypothetical protein 1787 46.42 0 2042812..2044026 + 404 146292898 - Sputcn32_1799 - Fmu (Sun) domain-containing protein 1788 41.82 0 2044164..2046413 + 749 146292899 - Sputcn32_1800 - diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) 1789 43.49 0 2046504..2047517 - 337 146292900 ddl Sputcn32_1801 - D-alanyl-alanine synthetase A 1790 39.95 -1 2047864..2048649 + 261 146292901 - Sputcn32_1802 - extracellular solute-binding protein 1791 46.97 0 2048787..2050187 - 466 146292902 asnC Sputcn32_1803 - asparaginyl-tRNA synthetase 1792 44.05 0 2050338..2050673 + 111 146292903 - Sputcn32_1804 - hypothetical protein 1793 44.44 0 2050694..2051278 - 194 146292904 - Sputcn32_1805 - NUDIX hydrolase 1794 46.40 0 2051318..2052718 - 466 146292905 - Sputcn32_1806 - para-aminobenzoate synthase, subunit I 1795 50.61 +1 2052838..2054382 + 514 146292906 - Sputcn32_1807 - tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit 1796 44.86 0 2054642..2056705 + 687 146292907 - Sputcn32_1808 - peptidase S9 prolyl oligopeptidase 1797 48.58 +1 2056901..2057359 + 152 146292908 - Sputcn32_1809 - GCN5-related N-acetyltransferase 1798 48.72 +1 2057430..2058365 + 311 146292909 - Sputcn32_1810 - hypothetical protein 1799 47.99 0 2058566..2061178 - 870 146292910 - Sputcn32_1811 - bifunctional acetaldehyde-CoA/alcohol dehydrogenase 1800 42.65 0 2061496..2062128 + 210 146292911 - Sputcn32_1812 - hypothetical protein 1801 43.11 0 2062385..2064379 + 664 146292912 - Sputcn32_1813 - methyl-accepting chemotaxis sensory transducer 1802 57.88 +2 2065072..2066220 - 382 146292913 - Sputcn32_1815 - major facilitator transporter 1803 54.68 +2 2066223..2067440 - 405 146292914 - Sputcn32_1816 - major facilitator transporter 1804 56.11 +2 2067437..2068630 - 397 146292915 - Sputcn32_1817 - beta-lactamase 1805 52.80 +2 2068767..2069660 + 297 146292916 - Sputcn32_1818 - LysR family transcriptional regulator 1806 48.88 +1 2070103..2071080 + 325 146292917 - Sputcn32_1819 - CRISPR-associated Cas1 family protein 1807 41.57 0 2071093..2074029 + 978 146292918 - Sputcn32_1820 - DEAD-like helicases-like protein 1808 39.03 -1 2074033..2074980 + 315 146292919 - Sputcn32_1821 - hypothetical protein 1809 37.49 -1 2074989..2075999 + 336 146292920 - Sputcn32_1822 - hypothetical protein 1810 40.76 -1 2076008..2076559 + 183 146292921 - Sputcn32_1823 - CRISPR-associated Csy4 family protein 1811 44.51 0 2081819..2083813 + 664 146292922 - Sputcn32_1824 - helicase c2 1812 41.58 0 2083987..2084277 - 96 146292923 - Sputcn32_1825 - cytochrome c3 1813 44.36 0 2084864..2086849 - 661 146292924 - Sputcn32_1826 - TonB-dependent receptor 1814 44.67 0 2087039..2088547 - 502 146292925 - Sputcn32_1827 - methyl-accepting chemotaxis sensory transducer 1815 45.93 0 2089072..2090055 + 327 146292926 pheS Sputcn32_1828 - phenylalanyl-tRNA synthetase subunit alpha 1816 48.16 0 2090071..2092458 + 795 146292927 pheT Sputcn32_1829 - phenylalanyl-tRNA synthetase subunit beta 1817 46.80 0 2092462..2092758 + 98 146292928 - Sputcn32_1830 - integration host factor, alpha subunit 1818 45.12 0 2092855..2093796 + 313 146292929 - Sputcn32_1831 - lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 1819 46.84 0 2093933..2094280 - 115 146292930 - Sputcn32_1832 - hydrogenase nickel insertion protein HypA 1820 48.38 0 2094280..2095296 - 338 146292931 - Sputcn32_1833 - hydrogenase expression/formation protein HypE 1821 49.47 +1 2095289..2096428 - 379 146292932 - Sputcn32_1834 - hydrogenase expression/formation protein HypD 1822 42.28 0 2096490..2096735 - 81 146292933 - Sputcn32_1835 - hydrogenase assembly chaperone hypC/hupF 1823 46.10 0 2096735..2097517 - 260 146292934 - Sputcn32_1836 - hydrogenase accessory protein HypB 1824 47.37 0 2097792..2100491 - 899 146292935 - Sputcn32_1837 - CoA-binding domain-containing protein 1825 39.63 -1 2100693..2101280 + 195 146292936 - Sputcn32_1838 - hypothetical protein 1826 45.38 0 2101406..2103016 - 536 146292937 - Sputcn32_1839 - ABC transporter related 1827 45.37 0 2103228..2104016 + 262 146292938 - Sputcn32_1840 - hypothetical protein 1828 44.29 0 2104218..2106308 - 696 146292939 - Sputcn32_1841 - TonB-dependent siderophore receptor 1829 43.08 0 2106437..2107606 + 389 146292940 - Sputcn32_1842 - peptidase 1830 41.67 0 2107606..2108073 + 155 146292941 - Sputcn32_1843 - hypothetical protein 1831 45.48 0 2108124..2108765 - 213 146292942 - Sputcn32_1844 - endonuclease III 1832 47.07 0 2108781..2109479 - 232 146292943 - Sputcn32_1845 - SoxR-reducing system protein RsxE 1833 44.66 0 2109472..2110098 - 208 146292944 - Sputcn32_1846 - electron transport complex protein RnfG 1834 47.62 0 2110165..2111214 - 349 146292945 - Sputcn32_1847 - electron transport complex, RnfABCDGE type, D subunit 1835 49.20 +1 2111280..2113661 - 793 146292946 - Sputcn32_1848 - electron transport complex protein RnfC 1836 47.17 0 2113655..2114254 - 199 146292947 - Sputcn32_1849 - electron transport complex protein RnfB 1837 44.73 0 2114256..2114834 - 192 146292948 - Sputcn32_1850 - Na(+)-translocating NADH-quinone reductase subunit E 1838 41.21 0 2114960..2116864 - 634 146292949 - Sputcn32_1851 - diguanylate cyclase/phosphodiesterase 1839 46.74 0 2118525..2120531 + 668 146292950 - Sputcn32_1852 - excinuclease ABC subunit B 1840 47.62 0 2120613..2121179 - 188 146292951 - Sputcn32_1853 - rhomboid family protein 1841 45.53 0 2121206..2121943 - 245 146292952 - Sputcn32_1854 - queuosine biosynthesis protein QueC 1842 47.23 0 2122115..2122783 + 222 146292953 - Sputcn32_1855 - radical activating enzyme 1843 44.38 0 2123520..2124008 + 162 146292954 - Sputcn32_1856 - hypothetical protein 1844 40.77 -1 2124153..2124488 + 111 146292955 - Sputcn32_1857 - hypothetical protein 1845 42.81 0 2124679..2126862 + 727 146292956 - Sputcn32_1858 - diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) 1846 42.68 0 2126953..2127444 - 163 146292957 - Sputcn32_1859 - SecC motif-containing protein 1847 38.97 -1 2127473..2128057 - 194 146292958 - Sputcn32_1860 - hypothetical protein 1848 44.67 0 2128192..2128782 + 196 146292959 - Sputcn32_1861 - Smr protein/MutS2 1849 44.86 0 2129059..2129700 + 213 146292960 - Sputcn32_1862 - TetR family transcriptional regulator 1850 45.13 0 2129713..2131992 + 759 146292961 - Sputcn32_1863 - acyl-CoA dehydrogenase 1851 47.36 0 2132146..2133585 - 479 146292962 - Sputcn32_1864 - pyruvate kinase 1852 42.81 0 2133770..2134624 - 284 146292963 - Sputcn32_1865 - DNA-binding transcriptional regulator HexR 1853 46.10 0 2134935..2136407 + 490 146292964 - Sputcn32_1866 - glucose-6-phosphate 1-dehydrogenase 1854 47.50 0 2136417..2137115 + 232 146292965 - Sputcn32_1867 - 6-phosphogluconolactonase 1855 49.78 +1 2137125..2138966 + 613 146292966 - Sputcn32_1868 - phosphogluconate dehydratase 1856 46.05 0 2138944..2139627 + 227 146292967 - Sputcn32_1869 - keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase 1857 48.30 0 2139817..2141166 - 449 146292968 - Sputcn32_1870 - deoxyguanosinetriphosphate triphosphohydrolase-like protein 1858 46.09 0 2141192..2141779 - 195 146292969 - Sputcn32_1871 - hypothetical protein 1859 46.09 0 2142062..2143276 - 404 146292970 - Sputcn32_1872 - aminotransferase AlaT 1860 42.95 0 2144062..2145444 + 460 146292971 - Sputcn32_1873 - Na+/H+ antiporter NhaC 1861 38.08 -1 2145658..2146479 + 273 146292972 - Sputcn32_1874 - hypothetical protein 1862 42.25 0 2146661..2147221 - 186 146292973 - Sputcn32_1875 - elongation factor P 1863 42.83 0 2147266..2148444 - 392 146292974 - Sputcn32_1876 - hypothetical protein 1864 43.75 0 2148554..2149081 - 175 146292975 - Sputcn32_1877 - flavodoxin FldA 1865 45.05 0 2149138..2149410 - 90 146292976 - Sputcn32_1878 - LexA regulated protein 1866 40.09 -1 2149422..2149643 - 73 146292977 - Sputcn32_1879 - hypothetical protein 1867 45.05 0 2149745..2150521 - 258 146292978 - Sputcn32_1880 - alpha/beta hydrolase fold 1868 43.55 0 2150804..2151361 + 185 146292979 - Sputcn32_1881 - replication initiation regulator SeqA 1869 47.25 0 2151408..2153060 + 550 146292980 - Sputcn32_1882 - phosphoglucomutase 1870 46.04 0 2153144..2153623 - 159 146292981 - Sputcn32_1883 - peptide methionine sulfoxide reductase 1871 46.57 0 2153920..2154954 + 344 146292982 - Sputcn32_1884 - succinylglutamate desuccinylase 1872 48.85 +1 2155117..2156295 + 392 146292983 - Sputcn32_1885 - 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) 1873 50.00 +1 2156299..2157276 + 325 146292984 - Sputcn32_1886 - transketolase, central region 1874 49.85 +1 2157286..2158908 + 540 146292985 - Sputcn32_1887 - dihydrolipoamide acetyltransferase 1875 49.22 +1 2159041..2160123 + 360 146292986 - Sputcn32_1888 - quinolinate synthetase 1876 45.70 0 2160282..2161292 - 336 146292987 - Sputcn32_1889 - glyceraldehyde-3-phosphate dehydrogenase, type I 1877 40.43 -1 2161499..2162344 - 281 146292988 - Sputcn32_1890 - hypothetical protein 1878 44.98 0 2162590..2164023 + 477 146292989 - Sputcn32_1891 - glyceraldehyde-3-phosphate dehydrogenase 1879 40.41 -1 2165570..2167024 + 484 146292990 - Sputcn32_1892 - peptidoglycan binding domain-containing protein 1880 45.72 0 2167148..2167696 + 182 146292991 - Sputcn32_1893 - hypothetical protein 44.78 MEAN 3.68 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0