version 1.0
Shewanella putrefaciens CN-32, complete genome - 1..4659220 3972 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1550 41.16 0 1777651..1778340 + 229 146292661 - Sputcn32_1561 - hypothetical protein 1551 38.94 -1 1778398..1778754 - 118 146292662 - Sputcn32_1562 - glutaredoxin 1552 40.20 -1 1779045..1782308 - 1087 146292663 - Sputcn32_1563 - hypothetical protein 1553 44.09 0 1782544..1782924 - 126 146292664 - Sputcn32_1564 - glyoxalase/bleomycin resistance protein/dioxygenase 1554 42.13 0 1783296..1784000 + 234 146292665 - Sputcn32_1565 - hypothetical protein 1555 43.87 0 1784102..1784452 + 116 146292666 - Sputcn32_1566 - glyoxalase/bleomycin resistance protein/dioxygenase 1556 44.13 0 1784427..1784639 + 70 146292667 - Sputcn32_1567 - hypothetical protein 1557 45.34 0 1784679..1785569 - 296 146292668 - Sputcn32_1568 - cytidine deaminase 1558 41.19 0 1785735..1787147 - 470 146292669 sbcB Sputcn32_1569 - exonuclease I 1559 41.45 0 1787326..1788126 + 266 146292670 - Sputcn32_1570 - hypothetical protein 1560 40.81 -1 1788167..1788982 + 271 146292671 rrmA Sputcn32_1571 - 23S rRNA methyltransferase A 1561 40.00 -1 1789282..1789491 + 69 146292672 - Sputcn32_1572 - cold-shock DNA-binding domain-containing protein 1562 47.24 0 1790320..1793706 - 1128 146292673 - Sputcn32_1573 - ribonuclease 1563 44.31 0 1794215..1795207 + 330 146292674 - Sputcn32_1574 - RluA family pseudouridine synthase 1564 45.19 0 1795230..1795946 + 238 146292675 - Sputcn32_1575 - HAD family hydrolase 1565 46.18 0 1796110..1796724 - 204 146292676 - Sputcn32_1576 - maf protein 1566 45.71 0 1796957..1797481 + 174 146292677 - Sputcn32_1577 - hypothetical protein 1567 46.78 0 1797499..1797669 + 56 146292678 rpmF Sputcn32_1578 - 50S ribosomal protein L32 1568 43.83 0 1797685..1798713 + 342 146292679 - Sputcn32_1579 - putative glycerol-3-phosphate acyltransferase PlsX 1569 46.67 0 1798723..1799682 + 319 146292680 - Sputcn32_1580 - 3-oxoacyl-(acyl carrier protein) synthase III 1570 46.39 0 1799770..1800696 + 308 146292681 - Sputcn32_1581 - malonyl CoA-acyl carrier protein transacylase 1571 45.11 0 1800706..1801452 + 248 146292682 - Sputcn32_1582 - 3-oxoacyl-(acyl-carrier-protein) reductase 1572 43.16 0 1801617..1801850 + 77 146292683 - Sputcn32_1583 - acyl carrier protein 1573 47.94 0 1802076..1803314 + 412 146292684 - Sputcn32_1584 - beta-ketoacyl synthase 1574 42.82 0 1803478..1803846 + 122 146292685 - Sputcn32_1585 - hypothetical protein 1575 48.54 +1 1803965..1804444 + 159 146292686 - Sputcn32_1586 - thioesterase superfamily protein 1576 51.14 +1 1804752..1805627 + 291 146292687 - Sputcn32_1587 - 6-phosphogluconate dehydrogenase, NAD-binding 1577 48.29 0 1805746..1806594 - 282 146292688 - Sputcn32_1588 - aldose 1-epimerase 1578 49.97 +1 1806842..1808632 + 596 146292689 - Sputcn32_1589 - acyl-CoA dehydrogenase domain-containing protein 1579 45.57 0 1808942..1811155 + 737 146292690 - Sputcn32_1590 - TonB-dependent siderophore receptor 1580 48.26 0 1811398..1812549 + 383 146292691 - Sputcn32_1591 - patatin 1581 47.45 0 1812741..1814405 - 554 146292692 asnB Sputcn32_1592 - asparagine synthetase B 1582 48.45 0 1814988..1816661 - 557 146292693 - Sputcn32_1593 - peptidase M28 1583 47.52 0 1816862..1817608 - 248 146292694 - Sputcn32_1594 - UMP phosphatase 1584 48.22 0 1817765..1818409 - 214 146292695 - Sputcn32_1595 - phosphoribosylglycinamide formyltransferase 1585 47.11 0 1818409..1819446 - 345 146292696 - Sputcn32_1596 - phosphoribosylaminoimidazole synthetase 1586 45.61 0 1819779..1820405 + 208 146292697 upp Sputcn32_1597 - uracil phosphoribosyltransferase 1587 44.92 0 1820531..1821850 - 439 146292698 - Sputcn32_1598 - Na+/H+ antiporter NhaC 1588 46.53 0 1822237..1822842 + 201 146292699 - Sputcn32_1599 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 1589 45.04 0 1822925..1823599 - 224 146292700 - Sputcn32_1600 - ribonuclease T 1590 43.22 0 1823742..1824611 + 289 146292701 - Sputcn32_1601 - OmpA/MotB domain-containing protein 1591 40.27 -1 1825167..1827356 + 729 146292702 - Sputcn32_1602 - prolyl oligopeptidase 1592 45.27 0 1827526..1827927 + 133 146292703 - Sputcn32_1603 - 4-hydroxybenzoyl-CoA thioesterase 1593 41.78 0 1827917..1828603 + 228 146292704 - Sputcn32_1604 - MotA/TolQ/ExbB proton channel 1594 46.90 0 1828603..1829037 + 144 146292705 - Sputcn32_1605 - biopolymer transport protein ExbD/TolR 1595 46.57 0 1829038..1830027 + 329 146292706 - Sputcn32_1606 - TolA family protein 1596 44.02 0 1830037..1831365 + 442 146292707 - Sputcn32_1607 - TolB domain-containing protein 1597 45.07 0 1831412..1831948 + 178 146292708 - Sputcn32_1608 - OmpA domain-containing protein 1598 44.80 0 1831973..1832722 + 249 146292709 - Sputcn32_1609 - tetratricopeptide domain-containing protein 1599 42.99 0 1833636..1834391 - 251 146292710 - Sputcn32_1610 - hypothetical protein 1600 44.03 0 1834595..1836661 - 688 146292711 cpdB Sputcn32_1611 - bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein 1601 45.36 0 1837369..1839513 + 714 146292712 - Sputcn32_1612 - peptidyl-dipeptidase Dcp 1602 39.26 -1 1839732..1840355 + 207 146292713 - Sputcn32_1613 - prolyl 4-hydroxylase, alpha subunit 1603 45.27 0 1840709..1841311 + 200 146292714 - Sputcn32_1614 - GCN5-related N-acetyltransferase 1604 45.59 0 1841344..1841808 + 154 146292715 - Sputcn32_1615 - GCN5-related N-acetyltransferase 1605 45.96 0 1841846..1842241 + 131 146292716 - Sputcn32_1616 - hypothetical protein 1606 38.60 -1 1842397..1842795 + 132 146292717 - Sputcn32_1617 - hypothetical protein 1607 40.15 -1 1842808..1843614 - 268 146292718 - Sputcn32_1618 - hypothetical protein 1608 41.12 0 1843751..1844842 + 363 146292719 - Sputcn32_1619 - hypothetical protein 1609 40.29 -1 1844829..1845992 + 387 146292720 - Sputcn32_1620 - hypothetical protein 1610 46.32 0 1845992..1846507 + 171 146292721 - Sputcn32_1621 - hypothetical protein 1611 47.90 0 1846801..1849635 + 944 146292722 - Sputcn32_1622 - endonuclease/exonuclease/phosphatase 1612 43.80 0 1849955..1850212 + 85 146292723 - Sputcn32_1623 - hypothetical protein 1613 47.88 0 1850457..1851164 + 235 146292724 - Sputcn32_1624 - phage integrase family protein 1614 50.56 +1 1851299..1852360 + 353 146292725 - Sputcn32_1625 - putative transposase 1615 36.07 -2 1853530..1853895 + 121 146292726 - Sputcn32_1626 - hypothetical protein 1616 37.91 -1 1854700..1855092 + 130 146292727 - Sputcn32_1627 - hypothetical protein 1617 47.94 0 1855290..1856186 - 298 146292728 - Sputcn32_1628 - hypothetical protein 1618 44.40 0 1856198..1856956 - 252 146292729 - Sputcn32_1629 - hypothetical protein 1619 45.20 0 1856956..1857486 - 176 146292730 - Sputcn32_1630 - hypothetical protein 1620 45.26 0 1857509..1857793 - 94 146292731 - Sputcn32_1631 - heat shock protein DnaJ domain-containing protein 1621 43.80 0 1859003..1861132 + 709 146292732 - Sputcn32_1632 - 23S rRNA m(2)G2445 methyltransferase 1622 45.83 0 1861125..1861388 + 87 146292733 - Sputcn32_1633 - glutaredoxin 2 1623 44.86 0 1861390..1863315 + 641 146292734 - Sputcn32_1634 - ABC transporter ATPase component 1624 42.30 0 1863344..1865173 + 609 146292735 - Sputcn32_1635 - hypothetical protein 1625 44.63 0 1865360..1865536 + 58 146292736 - Sputcn32_1636 - ribosome modulation factor 1626 42.25 0 1865643..1866158 - 171 146292737 - Sputcn32_1637 - 3-hydroxydecanoyl-(acyl carrier protein) dehydratase 1627 42.96 0 1866233..1867966 - 577 146292738 - Sputcn32_1638 - ATP-dependent protease 1628 44.79 0 1869104..1869784 + 226 146292739 - Sputcn32_1639 - response regulator 1629 44.81 0 1869851..1871680 + 609 146292740 uvrC Sputcn32_1640 - excinuclease ABC subunit C 1630 42.44 0 1871728..1872276 + 182 146292741 - Sputcn32_1641 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1631 43.26 0 1873595..1874521 - 308 146292742 - Sputcn32_1642 - ABC transporter related 1632 43.44 0 1874518..1875348 - 276 146292743 - Sputcn32_1643 - hypothetical protein 1633 46.40 0 1875421..1876086 - 221 146292744 - Sputcn32_1644 - hypothetical protein 1634 43.53 0 1876212..1877054 - 280 146292745 - Sputcn32_1645 - hypothetical protein 1635 44.44 0 1877602..1877754 + 50 146292746 - Sputcn32_1646 - hypothetical protein 1636 44.20 0 1878226..1880139 + 637 146292747 - Sputcn32_1647 - arginine decarboxylase 1637 41.15 0 1880269..1881240 + 323 146292748 - Sputcn32_1648 - adenosylmethionine decarboxylase 1638 46.95 0 1881429..1882067 + 212 146292749 - Sputcn32_1649 - pyridoxamine 5'-phosphate oxidase 1639 46.15 0 1882182..1882649 + 155 146292750 - Sputcn32_1650 - hypothetical protein 1640 39.76 -1 1882770..1883345 + 191 146292751 - Sputcn32_1651 - YceI family protein 1641 38.70 -1 1883523..1883876 + 117 146292752 - Sputcn32_1652 - hypothetical protein 1642 45.36 0 1883973..1885751 - 592 146292753 - Sputcn32_1653 - peptidase M61 domain-containing protein 1643 45.94 0 1885896..1886252 + 118 146292754 - Sputcn32_1654 - histidine triad (HIT) protein 1644 44.74 0 1886249..1887256 + 335 146292755 - Sputcn32_1655 - hypothetical protein 1645 45.96 0 1887390..1887785 + 131 146292756 - Sputcn32_1656 - hypothetical protein 1646 45.67 0 1888340..1889044 + 234 146292757 - Sputcn32_1657 - purine nucleoside phosphorylase 1647 40.52 -1 1889095..1890249 + 384 146292758 - Sputcn32_1658 - hypothetical protein 1648 43.76 0 1890326..1891006 - 226 146292759 - Sputcn32_1659 - cyclic nucleotide-binding protein 1649 46.07 0 1891411..1893600 + 729 146292760 - Sputcn32_1660 - TonB-dependent receptor 44.78 MEAN 3.68 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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