version 1.0
Shewanella putrefaciens CN-32, complete genome - 1..4659220 3972 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 102 45.31 0 116375..116800 + 141 146291213 - Sputcn32_0102 - hypothetical protein 103 43.99 0 116931..117221 + 96 146291214 - Sputcn32_0103 - hypothetical protein 104 46.77 0 117266..120436 - 1056 146291215 - Sputcn32_0104 - acriflavin resistance protein 105 48.81 +1 120441..121487 - 348 146291216 - Sputcn32_0105 - RND family efflux transporter MFP subunit 106 45.04 0 121532..123718 - 728 146291217 - Sputcn32_0106 - TonB-dependent siderophore receptor 107 46.64 0 124135..125457 - 440 146291218 - Sputcn32_0107 - peptidase M48, Ste24p 108 46.64 0 125794..126432 + 212 146291219 - Sputcn32_0108 - hypothetical protein 109 46.30 0 126451..126882 + 143 146291220 - Sputcn32_0109 - glyoxalase/bleomycin resistance protein/dioxygenase 110 45.14 0 126879..127505 - 208 146291221 - Sputcn32_0110 - hypothetical protein 111 50.67 +1 127621..128583 - 320 146291222 - Sputcn32_0111 - LysR family transcriptional regulator 112 52.00 +1 128733..129482 + 249 146291223 fabG Sputcn32_0112 - 3-ketoacyl-(acyl-carrier-protein) reductase 113 46.96 0 129778..130188 + 136 146291224 - Sputcn32_0113 - hypothetical protein 114 50.47 +1 130468..132579 + 703 146291225 - Sputcn32_0114 - cytochrome c biogenesis protein, transmembrane region 115 48.12 0 132749..133573 + 274 146291226 - Sputcn32_0115 - DSBA oxidoreductase 116 45.90 0 133599..134123 + 174 146291227 - Sputcn32_0116 - redoxin domain-containing protein 117 44.78 0 134168..134560 + 130 146291228 - Sputcn32_0117 - hypothetical protein 118 44.76 0 134709..135977 + 422 146291229 - Sputcn32_0118 - MscS mechanosensitive ion channel 119 44.39 0 135974..136597 - 207 146291230 - Sputcn32_0119 - lysine exporter protein LysE/YggA 120 48.23 0 136618..137181 - 187 146291231 - Sputcn32_0120 - phospholipid/glycerol acyltransferase 121 43.27 0 137302..137754 + 150 146291232 - Sputcn32_0121 - hypothetical protein 122 45.47 0 137763..138545 - 260 146291233 - Sputcn32_0122 - hypothetical protein 123 45.48 0 138608..140221 - 537 146291234 - Sputcn32_0123 - hypothetical protein 124 46.13 0 140628..141221 + 197 146291235 - Sputcn32_0124 - multiple antibiotic resistance (MarC)-related protein 125 45.63 0 141509..144118 + 869 146291236 - Sputcn32_0125 - peptidase M6, immune inhibitor A 126 47.42 0 144195..144755 - 186 146291237 - Sputcn32_0126 - chorismate lyase 127 39.72 -1 144870..145292 + 140 146291238 - Sputcn32_0127 - flagellar basal body-associated protein FliL-like protein 128 44.04 0 145349..146422 + 357 146291239 - Sputcn32_0128 - putative SAM-dependent methyltransferase 129 41.18 0 146543..147205 - 220 146291240 - Sputcn32_0129 - hypothetical protein 130 45.45 0 147273..148031 - 252 146291241 - Sputcn32_0130 - molybdopterin biosynthesis protein MoeB 131 48.96 +1 148044..149297 - 417 146291242 - Sputcn32_0131 - molybdenum cofactor synthesis domain-containing protein 132 43.20 0 149639..150175 + 178 146291243 - Sputcn32_0132 - Ferritin, Dps family protein 133 43.38 0 150238..153471 - 1077 146291244 - Sputcn32_0133 - diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) 134 48.17 0 154012..154665 - 217 146291245 - Sputcn32_0134 - 3,4-dihydroxy-2-butanone 4-phosphate synthase 135 46.44 0 155253..157388 + 711 146291246 - Sputcn32_0135 - oligopeptidase B 136 49.55 +1 157399..157842 + 147 146291247 - Sputcn32_0136 - excinuclease ABC subunit C 137 36.06 -2 158259..159137 + 292 146291248 - Sputcn32_0137 - hypothetical protein 138 32.90 -2 159624..160316 - 230 146291249 - Sputcn32_0138 - hypothetical protein 139 42.80 0 160379..160621 - 80 146291250 - Sputcn32_0139 - hypothetical protein 140 39.80 -1 160649..160849 - 66 146291251 - Sputcn32_0140 - hypothetical protein 141 44.70 0 161124..161897 - 257 146291252 - Sputcn32_0141 - putative lipoprotein 142 46.48 0 162172..162939 + 255 146291253 - Sputcn32_0142 - methyltransferase type 12 143 46.84 0 162965..164956 - 663 146291254 - Sputcn32_0143 - peptidase M14, carboxypeptidase A 144 45.07 0 165116..166231 - 371 146291255 - Sputcn32_0144 - hypothetical protein 145 46.04 0 166470..167720 - 416 146291256 - Sputcn32_0145 - sodium:dicarboxylate symporter 146 42.77 0 168175..168672 - 165 146291257 - Sputcn32_0146 - hypothetical protein 147 48.53 +1 168674..170233 - 519 146291258 - Sputcn32_0147 - AbgT putative transporter 148 42.86 0 170535..172130 + 531 146291259 - Sputcn32_0148 - hypothetical protein 149 48.35 0 172225..175374 - 1049 146291260 - Sputcn32_0149 - CzcA family heavy metal efflux protein 150 49.22 +1 175384..176913 - 509 146291261 - Sputcn32_0150 - RND family efflux transporter MFP subunit 151 47.89 0 176935..177195 - 86 146291262 - Sputcn32_0151 - copper-transporting ATPase domain-containing protein 152 49.40 +1 177414..177911 - 165 146291263 - Sputcn32_0152 - hypothetical protein 153 45.07 0 177983..178408 - 141 146291264 - Sputcn32_0153 - phage integrase family site specific recombinase 154 45.25 0 178519..179223 + 234 146291265 - Sputcn32_0154 - site-specific DNA-methyltransferase, type I modification 155 36.70 -2 179220..180854 - 544 146291266 - Sputcn32_0155 - AAA ATPase 156 41.33 0 180847..181659 - 270 146291267 - Sputcn32_0156 - hypothetical protein 157 41.57 0 181665..184955 - 1096 146291268 - Sputcn32_0157 - HsdR family type I site-specific deoxyribonuclease 158 36.32 -2 184966..186303 - 445 146291269 - Sputcn32_0158 - KAP P-loop domain-containing protein 159 37.80 -1 186313..187701 - 462 146291270 - Sputcn32_0159 - deoxyguanosinetriphosphate triphosphohydrolase-like protein 160 38.92 -1 187701..188900 - 399 146291271 - Sputcn32_0160 - restriction modification system DNA specificity subunit 161 43.39 0 188890..190410 - 506 146291272 - Sputcn32_0161 - type I restriction-modification system, M subunit 162 42.28 0 190451..191065 - 204 146291273 - Sputcn32_0162 - hypothetical protein 163 41.70 0 191300..191968 + 222 146291274 - Sputcn32_0163 - hypothetical protein 164 45.32 0 192103..192444 - 113 146291275 - Sputcn32_0164 - hypothetical protein 165 46.40 0 192454..193425 - 323 146291276 - Sputcn32_0165 - AAA ATPase 166 49.22 +1 193415..195076 - 553 146291277 - Sputcn32_0166 - putative integrase protein 167 50.93 +1 195081..195671 - 196 146291278 - Sputcn32_0167 - resolvase domain-containing protein 168 49.36 +1 195909..197561 - 550 146291279 - Sputcn32_0168 - putative mercuric reductase 169 46.38 0 197674..197949 - 91 146291280 - Sputcn32_0169 - mercuric transport protein periplasmic component 170 47.13 0 198002..198349 - 115 146291281 - Sputcn32_0170 - mercuric transporter MerT 171 49.63 +1 198429..198833 - 134 146291282 - Sputcn32_0171 - MerR family transcriptional regulator 172 47.49 0 199130..199786 - 218 146291283 - Sputcn32_0172 - DNA-repair protein 173 50.12 +1 199833..200648 - 271 146291284 - Sputcn32_0173 - integrase catalytic subunit 174 45.96 0 200699..200983 - 94 146291285 - Sputcn32_0174 - transposase IS3/IS911 family protein 175 44.13 0 201013..201438 - 141 146291286 - Sputcn32_0175 - putative prophage repressor 176 37.36 -2 201597..201944 - 115 146291287 - Sputcn32_0176 - hypothetical protein 177 39.53 -1 201946..202203 - 85 146291288 - Sputcn32_0177 - prevent-host-death family protein 178 54.03 +2 202826..203458 - 210 146291289 - Sputcn32_0178 - phage integrase family protein 179 35.51 -2 203703..204530 - 275 146291290 - Sputcn32_0179 - hypothetical protein 180 42.72 0 204634..205059 - 141 146291291 - Sputcn32_0180 - hypothetical protein 181 42.56 0 205738..206073 + 111 146291292 - Sputcn32_0181 - hypothetical protein 182 45.83 0 206070..206357 + 95 146291293 - Sputcn32_0182 - putative transcriptional regulator 183 42.00 0 206732..207031 - 99 146291294 - Sputcn32_0183 - hypothetical protein 184 41.25 0 207047..207349 - 100 146291295 - Sputcn32_0184 - hypothetical protein 185 44.65 0 207856..208014 + 52 146291296 - Sputcn32_0185 - hypothetical protein 186 47.15 0 208506..209996 + 496 146291297 - Sputcn32_0186 - sulphate transporter 187 47.72 0 210031..210885 + 284 146291298 - Sputcn32_0187 - UspA domain-containing protein 188 42.94 0 210976..211308 + 110 146291299 - Sputcn32_0188 - TraR/DksA family transcriptional regulator 189 43.16 0 211426..212046 - 206 146291300 - Sputcn32_0189 - resolvase domain-containing protein 190 39.46 -1 212216..212476 + 86 146291301 - Sputcn32_0190 - prevent-host-death family protein 191 42.95 0 212476..212787 + 103 146291302 - Sputcn32_0191 - plasmid stabilization system protein 192 41.42 0 212811..215891 + 1026 146291303 - Sputcn32_0192 - transposase Tn3 family protein 193 48.77 +1 215929..216621 + 230 146291304 - Sputcn32_0193 - cointegrate resolution protein T 194 55.39 +2 216839..217246 - 135 146291305 - Sputcn32_0194 - MerR family transcriptional regulator 195 57.08 +2 217342..218238 + 298 146291306 - Sputcn32_0195 - cation efflux system permease, putative 196 49.32 +1 218242..218754 + 170 146291307 - Sputcn32_0196 - lipoprotein signal peptidase 197 59.69 +2 218776..220065 + 429 146291308 - Sputcn32_0197 - transposase, IS204/IS1001/IS1096/IS1165 family protein 198 51.21 +1 220338..221450 - 370 146291309 - Sputcn32_0198 - iron-containing alcohol dehydrogenase 199 49.89 +1 221466..222860 - 464 146291310 - Sputcn32_0199 - aldehyde dehydrogenase 200 49.80 +1 222857..223366 - 169 146291311 - Sputcn32_0200 - hypothetical protein 201 50.90 +1 223399..223677 - 92 146291312 - Sputcn32_0201 - ethanolamine utilization protein EutN/carboxysome structural protein Ccml 44.78 MEAN 3.68 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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