version 1.0
Shewanella putrefaciens CN-32, complete genome - 1..4659220 3972 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1155 50.26 +1 1305066..1305449 + 127 146292266 - Sputcn32_1163 - holo-acyl-carrier-protein synthase 1156 40.00 -1 1305637..1306161 + 174 146292267 - Sputcn32_1164 - hypothetical protein 1157 42.22 0 1306226..1307497 - 423 146292268 - Sputcn32_1165 - hypothetical protein 1158 43.85 0 1307598..1308386 - 262 146292269 - Sputcn32_1166 - cytochrome c assembly protein 1159 48.03 0 1308715..1310088 + 457 146292270 - Sputcn32_1167 - signal recognition particle protein 1160 47.22 0 1310307..1310558 + 83 146292271 rpsP Sputcn32_1168 - 30S ribosomal protein S16 1161 44.63 0 1310579..1311109 + 176 146292272 rimM Sputcn32_1169 - 16S rRNA-processing protein 1162 49.67 +1 1311125..1311871 + 248 146292273 trmD Sputcn32_1170 - tRNA (guanine-N(1)-)-methyltransferase 1163 45.20 0 1311906..1312259 + 117 146292274 rplS Sputcn32_1171 - 50S ribosomal protein L19 1164 45.60 0 1312512..1313603 + 363 146292275 - Sputcn32_1172 - phospho-2-dehydro-3-deoxyheptonate aldolase 1165 45.57 0 1313619..1314770 + 383 146292276 tyrA Sputcn32_1173 - bifunctional chorismate mutase/prephenate dehydrogenase 1166 43.48 0 1314988..1316652 + 554 146292277 - Sputcn32_1174 - hydroxylamine reductase 1167 43.73 0 1316729..1317844 + 371 146292278 - Sputcn32_1175 - oxidoreductase FAD-binding subunit 1168 41.67 0 1317986..1318321 + 111 146292279 - Sputcn32_1176 - hypothetical protein 1169 44.29 0 1318450..1320429 - 659 146292280 - Sputcn32_1177 - chorismate mutase 1170 47.71 0 1320779..1322287 - 502 146292281 - Sputcn32_1178 - leucyl aminopeptidase 1171 43.94 0 1322544..1323656 + 370 146292282 - Sputcn32_1179 - permease YjgP/YjgQ family protein 1172 45.04 0 1323653..1324711 + 352 146292283 - Sputcn32_1180 - permease YjgP/YjgQ family protein 1173 44.90 0 1324787..1325296 - 169 146292284 - Sputcn32_1181 - RDD domain-containing protein 1174 42.25 0 1325343..1325600 - 85 146292285 - Sputcn32_1182 - hypothetical protein 1175 38.18 -1 1325619..1325969 - 116 146292286 - Sputcn32_1183 - hypothetical protein 1176 44.31 0 1325972..1326463 - 163 146292287 - Sputcn32_1184 - GCN5-related N-acetyltransferase 1177 45.50 0 1326852..1327484 + 210 146292288 - Sputcn32_1185 - hypothetical protein 1178 44.67 0 1327521..1329293 + 590 146292289 - Sputcn32_1186 - band 7 protein 1179 44.46 0 1329431..1331767 - 778 146292290 - Sputcn32_1187 - hypothetical protein 1180 43.88 0 1332117..1332761 + 214 146292291 - Sputcn32_1188 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 1181 43.60 0 1332778..1334901 + 707 146292292 - Sputcn32_1189 - putative oxidoreductase 1182 45.59 0 1334920..1335441 + 173 146292293 - Sputcn32_1190 - hypothetical protein 1183 46.63 0 1335618..1336181 + 187 146292294 - Sputcn32_1191 - PfpI family intracellular peptidase 1184 46.86 0 1336347..1336664 + 105 146292295 - Sputcn32_1192 - hypothetical protein 1185 40.72 -1 1336763..1337398 - 211 146292296 - Sputcn32_1193 - hypothetical protein 1186 36.81 -2 1337613..1338503 + 296 146292297 - Sputcn32_1194 - hypothetical protein 1187 46.39 0 1338622..1339923 - 433 146292298 - Sputcn32_1195 - DEAD/DEAH box helicase domain-containing protein 1188 43.28 0 1340248..1341816 - 522 146292299 - Sputcn32_1196 - methyl-accepting chemotaxis sensory transducer 1189 44.10 0 1342379..1342573 + 64 146292300 - Sputcn32_1197 - hypothetical protein 1190 48.99 +1 1342715..1344502 - 595 146292301 - Sputcn32_1198 - peptidase M24 1191 43.51 0 1344868..1345653 + 261 146292302 - Sputcn32_1199 - ROK family protein 1192 44.37 0 1345724..1346194 - 156 146292303 - Sputcn32_1200 - peptidylprolyl isomerase, FKBP-type 1193 47.69 0 1346436..1347779 + 447 146292304 - Sputcn32_1201 - short chain fatty acid transporter 1194 42.19 0 1347860..1348288 - 142 146292305 - Sputcn32_1202 - hypothetical protein 1195 42.02 0 1348316..1349512 - 398 146292306 - Sputcn32_1203 - hypothetical protein 1196 50.00 +1 1349662..1350099 - 145 146292307 - Sputcn32_1204 - cytosine deaminase 1197 48.37 0 1350234..1350725 - 163 146292308 - Sputcn32_1205 - hypothetical protein 1198 46.67 0 1350963..1351877 + 304 146292309 - Sputcn32_1206 - hypothetical protein 1199 47.88 0 1352106..1353707 + 533 146292310 - Sputcn32_1207 - hypothetical protein 1200 44.59 0 1353761..1354444 - 227 146292311 - Sputcn32_1208 - YheO domain-containing protein 1201 45.57 0 1354492..1355766 - 424 146292312 - Sputcn32_1209 - hypothetical protein 1202 39.81 -1 1356001..1356309 + 102 146292313 - Sputcn32_1210 - regulatory protein, ArsR 1203 42.39 0 1356370..1356612 + 80 146292314 - Sputcn32_1211 - redox-active disulfide protein 2 1204 39.67 -1 1356631..1357119 + 162 146292315 - Sputcn32_1212 - hypothetical protein 1205 47.38 0 1357112..1357816 + 234 146292316 - Sputcn32_1213 - cytochrome c biogenesis protein, transmembrane region 1206 46.05 0 1357900..1358355 - 151 146292317 - Sputcn32_1214 - arsenate reductase 1207 49.07 +1 1358436..1359719 - 427 146292318 - Sputcn32_1215 - arsenical pump membrane protein 1208 44.19 0 1359922..1361349 - 475 146292319 - Sputcn32_1216 - glutathione synthase 1209 43.94 0 1361526..1362524 - 332 146292320 - Sputcn32_1217 - permease 1210 48.51 +1 1362748..1363050 + 100 146292321 - Sputcn32_1218 - regulatory protein, ArsR 1211 41.73 0 1363148..1363564 + 138 146292322 - Sputcn32_1219 - protein tyrosine phosphatase 1212 43.97 0 1363557..1363904 + 115 146292323 - Sputcn32_1220 - regulatory protein, ArsR 1213 48.35 0 1363996..1364994 + 332 146292324 - Sputcn32_1221 - permease 1214 42.19 0 1365007..1365243 + 78 146292325 - Sputcn32_1222 - redox-active disulfide protein 2 1215 49.55 +1 1365382..1366392 + 336 146292326 - Sputcn32_1223 - glyceraldehyde-3-phosphate dehydrogenase 1216 49.23 +1 1366398..1367636 + 412 146292327 - Sputcn32_1224 - major facilitator transporter 1217 40.94 -1 1367768..1368043 + 91 146292328 - Sputcn32_1225 - hypothetical protein 1218 45.81 0 1368484..1369974 + 496 146292329 - Sputcn32_1226 - sulphate transporter 1219 49.59 +1 1370008..1370862 + 284 146292330 - Sputcn32_1227 - UspA domain-containing protein 1220 46.52 0 1370901..1371173 - 90 146292331 - Sputcn32_1228 - hypothetical protein 1221 45.53 0 1371649..1372140 - 163 146292332 smpB Sputcn32_1229 - SsrA-binding protein 1222 38.13 -1 1372415..1372852 + 145 146292333 - Sputcn32_1230 - cyclase/dehydrase 1223 43.84 0 1372842..1373174 + 110 146292334 - Sputcn32_1231 - hypothetical protein 1224 42.67 0 1373253..1373777 - 174 146292335 - Sputcn32_1232 - SmpA/OmlA domain-containing protein 1225 45.33 0 1374352..1375143 + 263 146292336 - Sputcn32_1233 - uroporphyrin-III C/tetrapyrrole methyltransferase 1226 37.09 -2 1375189..1375401 + 70 146292337 - Sputcn32_1234 - hypothetical protein 1227 39.91 -1 1375465..1377198 + 577 146292338 - Sputcn32_1235 - diguanylate cyclase 1228 44.58 0 1377460..1379229 + 589 146292339 - Sputcn32_1236 - potassium efflux system protein 1229 42.74 0 1379302..1381746 - 814 146292340 - Sputcn32_1237 - TonB-dependent receptor, plug 1230 46.47 0 1382530..1384257 + 575 146292341 - Sputcn32_1238 - malate synthase 1231 47.54 0 1384392..1385714 + 440 146292342 - Sputcn32_1239 - isocitrate lyase 1232 43.63 0 1386107..1386475 + 122 146292343 - Sputcn32_1240 - thioesterase superfamily protein 1233 46.85 0 1386543..1386764 - 73 146292344 - Sputcn32_1241 - hypothetical protein 1234 43.88 0 1386855..1388153 - 432 146292345 - Sputcn32_1242 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 1235 37.90 -1 1388531..1388902 - 123 146292346 - Sputcn32_1243 - hypothetical protein 1236 44.82 0 1389665..1390813 - 382 146292347 - Sputcn32_1244 - iron-containing alcohol dehydrogenase 1237 43.40 0 1391151..1391627 + 158 146292348 - Sputcn32_1245 - MarR family transcriptional regulator 1238 41.55 0 1391723..1392355 - 210 146292349 - Sputcn32_1246 - peptidyl-prolyl cis-trans isomerase, cyclophilin type 1239 45.76 0 1392868..1395105 + 745 146292350 - Sputcn32_1247 - 4-alpha-glucanotransferase 1240 46.43 0 1395170..1397407 + 745 146292351 - Sputcn32_1248 - glycogen branching enzyme 1241 45.97 0 1397404..1399611 + 735 146292352 - Sputcn32_1249 - glycogen debranching enzyme GlgX 1242 46.70 0 1399614..1402142 + 842 146292353 - Sputcn32_1250 - glycogen/starch/alpha-glucan phosphorylase 1243 46.40 0 1402193..1403455 + 420 146292354 - Sputcn32_1251 - glucose-1-phosphate adenylyltransferase 1244 45.21 0 1403526..1405133 + 535 146292355 - Sputcn32_1252 - starch synthase 1245 43.47 0 1405242..1408298 + 1018 146292356 - Sputcn32_1253 - diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) 1246 48.96 +1 1408419..1409864 + 481 146292357 - Sputcn32_1254 - DEAD/DEAH box helicase domain-containing protein 1247 43.67 0 1409979..1411061 + 360 146292358 - Sputcn32_1255 - cobalamin synthesis protein, P47K 1248 41.60 0 1411075..1411836 - 253 146292359 - Sputcn32_1256 - ABC transporter, periplasmic substrate-binding protein, putative 1249 40.61 -1 1412201..1412722 + 173 146292360 - Sputcn32_1257 - hypothetical protein 1250 45.72 0 1412801..1414342 - 513 146292361 - Sputcn32_1258 - major facilitator transporter 1251 45.48 0 1414742..1416091 + 449 146292362 - Sputcn32_1259 - multi anti extrusion protein MatE 1252 44.38 0 1416336..1417847 + 503 146292363 - Sputcn32_1260 - hypothetical protein 1253 47.13 0 1417967..1418437 + 156 146292364 - Sputcn32_1261 - hypothetical protein 1254 43.00 0 1418726..1419139 + 137 146292365 - Sputcn32_1262 - hypothetical protein 44.78 MEAN 3.68 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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