version 1.0
Shewanella putrefaciens CN-32, complete genome - 1..4659220 3972 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1114 40.64 -1 1263240..1264046 + 268 146292225 - Sputcn32_1122 - hypothetical protein 1115 45.58 0 1264039..1264389 + 116 146292226 - Sputcn32_1123 - iron-sulfur cluster insertion protein ErpA 1116 39.41 -1 1264487..1264930 - 147 146292227 - Sputcn32_1124 - hypothetical protein 1117 44.88 0 1264959..1265339 - 126 146292228 - Sputcn32_1125 - hypothetical protein 1118 47.30 0 1265593..1266702 - 369 146292229 anmK Sputcn32_1126 - anhydro-N-acetylmuramic acid kinase 1119 41.93 0 1266724..1268130 - 468 146292230 - Sputcn32_1127 - peptidase M23B 1120 44.81 0 1268257..1269450 + 397 146292231 - Sputcn32_1128 - tyrosyl-tRNA synthetase 1121 43.36 0 1269573..1270001 - 142 146292232 - Sputcn32_1129 - hypothetical protein 1122 42.21 0 1270122..1270583 - 153 146292233 - Sputcn32_1130 - hypothetical protein 1123 49.44 +1 1270615..1271241 - 208 146292234 - Sputcn32_1131 - hypothetical protein 1124 39.95 -1 1271238..1271615 - 125 146292235 - Sputcn32_1132 - hypothetical protein 1125 44.14 0 1271671..1272660 - 329 146292236 - Sputcn32_1133 - cobalamin biosynthesis protein CbiB 1126 47.56 0 1272698..1273393 - 231 146292237 - Sputcn32_1134 - adenosylhomocysteine nucleosidase 1127 51.10 +1 1273725..1275131 - 468 146292238 gltD Sputcn32_1135 - glutamate synthase subunit beta 1128 48.28 0 1275138..1279586 - 1482 146292239 gltB Sputcn32_1136 - glutamate synthase subunit alpha 1129 46.99 0 1280171..1281100 + 309 146292240 - Sputcn32_1137 - putative radical SAM protein 1130 41.80 0 1281291..1281656 + 121 146292241 - Sputcn32_1138 - Hpt protein 1131 41.78 0 1282022..1282933 + 303 146292242 - Sputcn32_1139 - LysR family transcriptional regulator 1132 42.32 0 1282988..1284055 - 355 146292243 - Sputcn32_1140 - putative adenylate/guanylate cyclase 1133 44.79 0 1284178..1284849 - 223 146292244 - Sputcn32_1141 - DNA mismatch repair protein 1134 44.00 0 1285537..1286061 + 174 146292245 - Sputcn32_1142 - dinucleoside polyphosphate hydrolase 1135 45.68 0 1286084..1288318 + 744 146292246 - Sputcn32_1143 - phosphoenolpyruvate-protein phosphotransferase PtsP 1136 42.20 0 1288377..1289177 + 266 146292247 - Sputcn32_1144 - hypothetical protein 1137 43.74 0 1289217..1290023 + 268 146292248 - Sputcn32_1145 - prolipoprotein diacylglyceryl transferase 1138 42.14 0 1290023..1290817 + 264 146292249 thyA Sputcn32_1146 - thymidylate synthase 1139 42.26 0 1290934..1292109 + 391 146292250 - Sputcn32_1147 - Na+/H+ antiporter NhaA 1140 41.09 -1 1292106..1292492 + 128 146292251 - Sputcn32_1148 - hypothetical protein 1141 42.57 0 1292600..1293508 + 302 146292252 nhaR Sputcn32_1149 - transcriptional activator NhaR 1142 42.08 0 1293603..1293842 + 79 146292253 - Sputcn32_1150 - hypothetical protein 1143 39.78 -1 1293892..1294263 + 123 146292254 - Sputcn32_1151 - hypothetical protein 1144 45.72 0 1294300..1295913 - 537 146292255 - Sputcn32_1152 - L-aspartate oxidase 1145 43.52 0 1296103..1296681 + 192 146292256 - Sputcn32_1153 - RNA polymerase sigma factor RpoE 1146 45.73 0 1296708..1297328 + 206 146292257 - Sputcn32_1154 - anti sigma-E protein, RseA 1147 43.09 0 1297341..1298273 + 310 146292258 - Sputcn32_1155 - sigma E regulatory protein, MucB/RseB 1148 40.93 -1 1298284..1298757 + 157 146292259 - Sputcn32_1156 - positive regulator of sigma E, RseC/MucC 1149 44.50 0 1298924..1300714 + 596 146292260 - Sputcn32_1157 - GTP-binding protein LepA 1150 44.12 0 1300887..1301804 + 305 146292261 - Sputcn32_1158 - signal peptidase I 1151 43.61 0 1301806..1302486 + 226 146292262 - Sputcn32_1159 - ribonuclease III 1152 45.82 0 1302483..1303499 + 338 146292263 era Sputcn32_1160 - GTP-binding protein Era 1153 46.27 0 1303527..1304237 + 236 146292264 - Sputcn32_1161 - DNA repair protein RecO 1154 47.97 0 1304329..1305066 + 245 146292265 - Sputcn32_1162 - pyridoxal phosphate biosynthetic protein PdxJ 1155 50.26 +1 1305066..1305449 + 127 146292266 - Sputcn32_1163 - holo-acyl-carrier-protein synthase 1156 40.00 -1 1305637..1306161 + 174 146292267 - Sputcn32_1164 - hypothetical protein 1157 42.22 0 1306226..1307497 - 423 146292268 - Sputcn32_1165 - hypothetical protein 1158 43.85 0 1307598..1308386 - 262 146292269 - Sputcn32_1166 - cytochrome c assembly protein 1159 48.03 0 1308715..1310088 + 457 146292270 - Sputcn32_1167 - signal recognition particle protein 1160 47.22 0 1310307..1310558 + 83 146292271 rpsP Sputcn32_1168 - 30S ribosomal protein S16 1161 44.63 0 1310579..1311109 + 176 146292272 rimM Sputcn32_1169 - 16S rRNA-processing protein 1162 49.67 +1 1311125..1311871 + 248 146292273 trmD Sputcn32_1170 - tRNA (guanine-N(1)-)-methyltransferase 1163 45.20 0 1311906..1312259 + 117 146292274 rplS Sputcn32_1171 - 50S ribosomal protein L19 1164 45.60 0 1312512..1313603 + 363 146292275 - Sputcn32_1172 - phospho-2-dehydro-3-deoxyheptonate aldolase 1165 45.57 0 1313619..1314770 + 383 146292276 tyrA Sputcn32_1173 - bifunctional chorismate mutase/prephenate dehydrogenase 1166 43.48 0 1314988..1316652 + 554 146292277 - Sputcn32_1174 - hydroxylamine reductase 1167 43.73 0 1316729..1317844 + 371 146292278 - Sputcn32_1175 - oxidoreductase FAD-binding subunit 1168 41.67 0 1317986..1318321 + 111 146292279 - Sputcn32_1176 - hypothetical protein 1169 44.29 0 1318450..1320429 - 659 146292280 - Sputcn32_1177 - chorismate mutase 1170 47.71 0 1320779..1322287 - 502 146292281 - Sputcn32_1178 - leucyl aminopeptidase 1171 43.94 0 1322544..1323656 + 370 146292282 - Sputcn32_1179 - permease YjgP/YjgQ family protein 1172 45.04 0 1323653..1324711 + 352 146292283 - Sputcn32_1180 - permease YjgP/YjgQ family protein 1173 44.90 0 1324787..1325296 - 169 146292284 - Sputcn32_1181 - RDD domain-containing protein 1174 42.25 0 1325343..1325600 - 85 146292285 - Sputcn32_1182 - hypothetical protein 1175 38.18 -1 1325619..1325969 - 116 146292286 - Sputcn32_1183 - hypothetical protein 1176 44.31 0 1325972..1326463 - 163 146292287 - Sputcn32_1184 - GCN5-related N-acetyltransferase 1177 45.50 0 1326852..1327484 + 210 146292288 - Sputcn32_1185 - hypothetical protein 1178 44.67 0 1327521..1329293 + 590 146292289 - Sputcn32_1186 - band 7 protein 1179 44.46 0 1329431..1331767 - 778 146292290 - Sputcn32_1187 - hypothetical protein 1180 43.88 0 1332117..1332761 + 214 146292291 - Sputcn32_1188 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 1181 43.60 0 1332778..1334901 + 707 146292292 - Sputcn32_1189 - putative oxidoreductase 1182 45.59 0 1334920..1335441 + 173 146292293 - Sputcn32_1190 - hypothetical protein 1183 46.63 0 1335618..1336181 + 187 146292294 - Sputcn32_1191 - PfpI family intracellular peptidase 1184 46.86 0 1336347..1336664 + 105 146292295 - Sputcn32_1192 - hypothetical protein 1185 40.72 -1 1336763..1337398 - 211 146292296 - Sputcn32_1193 - hypothetical protein 1186 36.81 -2 1337613..1338503 + 296 146292297 - Sputcn32_1194 - hypothetical protein 1187 46.39 0 1338622..1339923 - 433 146292298 - Sputcn32_1195 - DEAD/DEAH box helicase domain-containing protein 1188 43.28 0 1340248..1341816 - 522 146292299 - Sputcn32_1196 - methyl-accepting chemotaxis sensory transducer 1189 44.10 0 1342379..1342573 + 64 146292300 - Sputcn32_1197 - hypothetical protein 1190 48.99 +1 1342715..1344502 - 595 146292301 - Sputcn32_1198 - peptidase M24 1191 43.51 0 1344868..1345653 + 261 146292302 - Sputcn32_1199 - ROK family protein 1192 44.37 0 1345724..1346194 - 156 146292303 - Sputcn32_1200 - peptidylprolyl isomerase, FKBP-type 1193 47.69 0 1346436..1347779 + 447 146292304 - Sputcn32_1201 - short chain fatty acid transporter 1194 42.19 0 1347860..1348288 - 142 146292305 - Sputcn32_1202 - hypothetical protein 1195 42.02 0 1348316..1349512 - 398 146292306 - Sputcn32_1203 - hypothetical protein 1196 50.00 +1 1349662..1350099 - 145 146292307 - Sputcn32_1204 - cytosine deaminase 1197 48.37 0 1350234..1350725 - 163 146292308 - Sputcn32_1205 - hypothetical protein 1198 46.67 0 1350963..1351877 + 304 146292309 - Sputcn32_1206 - hypothetical protein 1199 47.88 0 1352106..1353707 + 533 146292310 - Sputcn32_1207 - hypothetical protein 1200 44.59 0 1353761..1354444 - 227 146292311 - Sputcn32_1208 - YheO domain-containing protein 1201 45.57 0 1354492..1355766 - 424 146292312 - Sputcn32_1209 - hypothetical protein 1202 39.81 -1 1356001..1356309 + 102 146292313 - Sputcn32_1210 - regulatory protein, ArsR 1203 42.39 0 1356370..1356612 + 80 146292314 - Sputcn32_1211 - redox-active disulfide protein 2 1204 39.67 -1 1356631..1357119 + 162 146292315 - Sputcn32_1212 - hypothetical protein 1205 47.38 0 1357112..1357816 + 234 146292316 - Sputcn32_1213 - cytochrome c biogenesis protein, transmembrane region 1206 46.05 0 1357900..1358355 - 151 146292317 - Sputcn32_1214 - arsenate reductase 1207 49.07 +1 1358436..1359719 - 427 146292318 - Sputcn32_1215 - arsenical pump membrane protein 1208 44.19 0 1359922..1361349 - 475 146292319 - Sputcn32_1216 - glutathione synthase 1209 43.94 0 1361526..1362524 - 332 146292320 - Sputcn32_1217 - permease 1210 48.51 +1 1362748..1363050 + 100 146292321 - Sputcn32_1218 - regulatory protein, ArsR 1211 41.73 0 1363148..1363564 + 138 146292322 - Sputcn32_1219 - protein tyrosine phosphatase 1212 43.97 0 1363557..1363904 + 115 146292323 - Sputcn32_1220 - regulatory protein, ArsR 1213 48.35 0 1363996..1364994 + 332 146292324 - Sputcn32_1221 - permease 44.78 MEAN 3.68 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0