version 1.0
Shewanella putrefaciens CN-32, complete genome - 1..4659220 3972 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1073 44.67 0 1212789..1213511 - 240 146292184 - Sputcn32_1081 - hypothetical protein 1074 44.54 0 1213695..1214060 - 121 146292185 - Sputcn32_1082 - protein of unknown function DUF861, cupin_3 1075 51.78 +1 1214091..1215581 - 496 146292186 - Sputcn32_1083 - methylmalonate-semialdehyde dehydrogenase 1076 50.15 +1 1215651..1216988 - 445 146292187 - Sputcn32_1084 - beta alanine--pyruvate transaminase 1077 50.90 +1 1217269..1218765 + 498 146292188 - Sputcn32_1085 - aldehyde dehydrogenase 1078 41.67 0 1219469..1219672 + 67 146292189 - Sputcn32_1086 - hypothetical protein 1079 40.10 -1 1220859..1221272 + 137 146292190 - Sputcn32_1087 - rare lipoprotein A 1080 49.42 +1 1221466..1222323 + 285 146292191 - Sputcn32_1088 - 3-mercaptopyruvate sulfurtransferase 1081 44.31 0 1222383..1222892 + 169 146292192 - Sputcn32_1089 - hypothetical protein 1082 47.94 0 1223019..1224326 - 435 146292193 - Sputcn32_1090 - FAD dependent oxidoreductase 1083 41.89 0 1224563..1225111 + 182 146292194 - Sputcn32_1091 - XRE family transcriptional regulator 1084 47.11 0 1225519..1226280 + 253 146292195 - Sputcn32_1092 - peptidase C26 1085 44.40 0 1226283..1227638 + 451 146292196 - Sputcn32_1093 - glutamate--ammonia ligase 1086 41.69 0 1228259..1229359 + 366 146292197 - Sputcn32_1094 - extracellular solute-binding protein 1087 45.29 0 1229534..1230670 + 378 146292198 - Sputcn32_1095 - spermidine/putrescine ABC transporter ATPase subunit 1088 42.16 0 1230667..1231572 + 301 146292199 - Sputcn32_1096 - binding-protein-dependent transport systems inner membrane component 1089 45.96 0 1231569..1232384 + 271 146292200 - Sputcn32_1097 - binding-protein-dependent transport systems inner membrane component 1090 49.49 +1 1232642..1233928 + 428 146292201 - Sputcn32_1098 - FAD dependent oxidoreductase 1091 49.34 +1 1233979..1235427 + 482 146292202 - Sputcn32_1099 - succinic semialdehyde dehydrogenase 1092 51.88 +1 1235460..1236737 + 425 146292203 - Sputcn32_1100 - 4-aminobutyrate aminotransferase 1093 49.21 +1 1236884..1237891 - 335 146292204 - Sputcn32_1101 - luciferase family protein 1094 46.86 0 1238409..1240049 - 546 146292205 - Sputcn32_1102 - amino acid/peptide transporter 1095 43.00 0 1240308..1242428 + 706 146292206 - Sputcn32_1103 - methyl-accepting chemotaxis sensory transducer 1096 45.92 0 1242929..1244779 - 616 146292207 - Sputcn32_1104 - RpoD family RNA polymerase sigma factor 1097 44.75 0 1244910..1246634 - 574 146292208 - Sputcn32_1105 - DNA primase 1098 46.85 0 1246718..1247161 - 147 146292209 - Sputcn32_1106 - GatB/Yqey domain-containing protein 1099 44.91 0 1247168..1247383 - 71 146292210 rpsU Sputcn32_1107 - 30S ribosomal protein S21 1100 47.89 0 1247602..1248618 + 338 146292211 - Sputcn32_1108 - metalloendopeptidase glycoprotease family 1101 46.24 0 1248697..1249308 - 203 146292212 - Sputcn32_1109 - putative glycerol-3-phosphate acyltransferase PlsY 1102 42.74 0 1249577..1249927 + 116 146292213 - Sputcn32_1110 - dihydroneopterin aldolase 1103 43.06 0 1250012..1250515 + 167 146292214 - Sputcn32_1111 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 1104 40.07 -1 1250534..1251334 + 266 146292215 - Sputcn32_1112 - undecaprenyl pyrophosphate phosphatase 1105 39.98 -1 1251419..1252276 + 285 146292216 - Sputcn32_1113 - rRNA (guanine-N(1)-)-methyltransferase 1106 44.19 0 1252482..1252748 - 88 146292217 - Sputcn32_1114 - major outer membrane lipoprotein, putative 1107 44.34 0 1252995..1254257 - 420 146292218 - Sputcn32_1115 - metal dependent phosphohydrolase 1108 43.21 0 1254412..1256091 + 559 146292219 - Sputcn32_1116 - peptidoglycan binding domain-containing protein 1109 45.51 0 1256091..1257158 + 355 146292220 - Sputcn32_1117 - general secretion pathway protein B 1110 40.46 -1 1257219..1258466 - 415 146292221 - Sputcn32_1118 - citrate transporter 1111 48.88 +1 1258880..1260172 - 430 146292222 - Sputcn32_1119 - glutamate-1-semialdehyde-2,1-aminomutase 1112 45.88 0 1260199..1261218 - 339 146292223 - Sputcn32_1120 - aspartate carbamoyltransferase 1113 46.61 0 1261442..1263166 - 574 146292224 - Sputcn32_1121 - Cl- channel, voltage-gated family protein 1114 40.64 -1 1263240..1264046 + 268 146292225 - Sputcn32_1122 - hypothetical protein 1115 45.58 0 1264039..1264389 + 116 146292226 - Sputcn32_1123 - iron-sulfur cluster insertion protein ErpA 1116 39.41 -1 1264487..1264930 - 147 146292227 - Sputcn32_1124 - hypothetical protein 1117 44.88 0 1264959..1265339 - 126 146292228 - Sputcn32_1125 - hypothetical protein 1118 47.30 0 1265593..1266702 - 369 146292229 anmK Sputcn32_1126 - anhydro-N-acetylmuramic acid kinase 1119 41.93 0 1266724..1268130 - 468 146292230 - Sputcn32_1127 - peptidase M23B 1120 44.81 0 1268257..1269450 + 397 146292231 - Sputcn32_1128 - tyrosyl-tRNA synthetase 1121 43.36 0 1269573..1270001 - 142 146292232 - Sputcn32_1129 - hypothetical protein 1122 42.21 0 1270122..1270583 - 153 146292233 - Sputcn32_1130 - hypothetical protein 1123 49.44 +1 1270615..1271241 - 208 146292234 - Sputcn32_1131 - hypothetical protein 1124 39.95 -1 1271238..1271615 - 125 146292235 - Sputcn32_1132 - hypothetical protein 1125 44.14 0 1271671..1272660 - 329 146292236 - Sputcn32_1133 - cobalamin biosynthesis protein CbiB 1126 47.56 0 1272698..1273393 - 231 146292237 - Sputcn32_1134 - adenosylhomocysteine nucleosidase 1127 51.10 +1 1273725..1275131 - 468 146292238 gltD Sputcn32_1135 - glutamate synthase subunit beta 1128 48.28 0 1275138..1279586 - 1482 146292239 gltB Sputcn32_1136 - glutamate synthase subunit alpha 1129 46.99 0 1280171..1281100 + 309 146292240 - Sputcn32_1137 - putative radical SAM protein 1130 41.80 0 1281291..1281656 + 121 146292241 - Sputcn32_1138 - Hpt protein 1131 41.78 0 1282022..1282933 + 303 146292242 - Sputcn32_1139 - LysR family transcriptional regulator 1132 42.32 0 1282988..1284055 - 355 146292243 - Sputcn32_1140 - putative adenylate/guanylate cyclase 1133 44.79 0 1284178..1284849 - 223 146292244 - Sputcn32_1141 - DNA mismatch repair protein 1134 44.00 0 1285537..1286061 + 174 146292245 - Sputcn32_1142 - dinucleoside polyphosphate hydrolase 1135 45.68 0 1286084..1288318 + 744 146292246 - Sputcn32_1143 - phosphoenolpyruvate-protein phosphotransferase PtsP 1136 42.20 0 1288377..1289177 + 266 146292247 - Sputcn32_1144 - hypothetical protein 1137 43.74 0 1289217..1290023 + 268 146292248 - Sputcn32_1145 - prolipoprotein diacylglyceryl transferase 1138 42.14 0 1290023..1290817 + 264 146292249 thyA Sputcn32_1146 - thymidylate synthase 1139 42.26 0 1290934..1292109 + 391 146292250 - Sputcn32_1147 - Na+/H+ antiporter NhaA 1140 41.09 -1 1292106..1292492 + 128 146292251 - Sputcn32_1148 - hypothetical protein 1141 42.57 0 1292600..1293508 + 302 146292252 nhaR Sputcn32_1149 - transcriptional activator NhaR 1142 42.08 0 1293603..1293842 + 79 146292253 - Sputcn32_1150 - hypothetical protein 1143 39.78 -1 1293892..1294263 + 123 146292254 - Sputcn32_1151 - hypothetical protein 1144 45.72 0 1294300..1295913 - 537 146292255 - Sputcn32_1152 - L-aspartate oxidase 1145 43.52 0 1296103..1296681 + 192 146292256 - Sputcn32_1153 - RNA polymerase sigma factor RpoE 1146 45.73 0 1296708..1297328 + 206 146292257 - Sputcn32_1154 - anti sigma-E protein, RseA 1147 43.09 0 1297341..1298273 + 310 146292258 - Sputcn32_1155 - sigma E regulatory protein, MucB/RseB 1148 40.93 -1 1298284..1298757 + 157 146292259 - Sputcn32_1156 - positive regulator of sigma E, RseC/MucC 1149 44.50 0 1298924..1300714 + 596 146292260 - Sputcn32_1157 - GTP-binding protein LepA 1150 44.12 0 1300887..1301804 + 305 146292261 - Sputcn32_1158 - signal peptidase I 1151 43.61 0 1301806..1302486 + 226 146292262 - Sputcn32_1159 - ribonuclease III 1152 45.82 0 1302483..1303499 + 338 146292263 era Sputcn32_1160 - GTP-binding protein Era 1153 46.27 0 1303527..1304237 + 236 146292264 - Sputcn32_1161 - DNA repair protein RecO 1154 47.97 0 1304329..1305066 + 245 146292265 - Sputcn32_1162 - pyridoxal phosphate biosynthetic protein PdxJ 1155 50.26 +1 1305066..1305449 + 127 146292266 - Sputcn32_1163 - holo-acyl-carrier-protein synthase 1156 40.00 -1 1305637..1306161 + 174 146292267 - Sputcn32_1164 - hypothetical protein 1157 42.22 0 1306226..1307497 - 423 146292268 - Sputcn32_1165 - hypothetical protein 1158 43.85 0 1307598..1308386 - 262 146292269 - Sputcn32_1166 - cytochrome c assembly protein 1159 48.03 0 1308715..1310088 + 457 146292270 - Sputcn32_1167 - signal recognition particle protein 1160 47.22 0 1310307..1310558 + 83 146292271 rpsP Sputcn32_1168 - 30S ribosomal protein S16 1161 44.63 0 1310579..1311109 + 176 146292272 rimM Sputcn32_1169 - 16S rRNA-processing protein 1162 49.67 +1 1311125..1311871 + 248 146292273 trmD Sputcn32_1170 - tRNA (guanine-N(1)-)-methyltransferase 1163 45.20 0 1311906..1312259 + 117 146292274 rplS Sputcn32_1171 - 50S ribosomal protein L19 1164 45.60 0 1312512..1313603 + 363 146292275 - Sputcn32_1172 - phospho-2-dehydro-3-deoxyheptonate aldolase 1165 45.57 0 1313619..1314770 + 383 146292276 tyrA Sputcn32_1173 - bifunctional chorismate mutase/prephenate dehydrogenase 1166 43.48 0 1314988..1316652 + 554 146292277 - Sputcn32_1174 - hydroxylamine reductase 1167 43.73 0 1316729..1317844 + 371 146292278 - Sputcn32_1175 - oxidoreductase FAD-binding subunit 1168 41.67 0 1317986..1318321 + 111 146292279 - Sputcn32_1176 - hypothetical protein 1169 44.29 0 1318450..1320429 - 659 146292280 - Sputcn32_1177 - chorismate mutase 1170 47.71 0 1320779..1322287 - 502 146292281 - Sputcn32_1178 - leucyl aminopeptidase 1171 43.94 0 1322544..1323656 + 370 146292282 - Sputcn32_1179 - permease YjgP/YjgQ family protein 1172 45.04 0 1323653..1324711 + 352 146292283 - Sputcn32_1180 - permease YjgP/YjgQ family protein 44.78 MEAN 3.68 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.