version 1.0
Shewanella putrefaciens CN-32, complete genome - 1..4659220 3972 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 63 46.47 0 73905..74315 + 136 146291174 - Sputcn32_0063 - thioesterase superfamily protein 64 50.64 +1 74439..74987 + 182 146291175 - Sputcn32_0064 - HPP family protein+B94 65 45.69 0 74984..75250 - 88 146291176 - Sputcn32_0065 - hypothetical protein 66 44.22 0 75320..75760 - 146 146291177 - Sputcn32_0066 - thioesterase superfamily protein 67 46.21 0 75872..76267 + 131 146291178 - Sputcn32_0067 - glutathione-dependent formaldehyde-activating, GFA 68 45.16 0 76603..77727 + 374 146291179 - Sputcn32_0068 - hypothetical protein 69 44.35 0 77797..78477 - 226 146291180 - Sputcn32_0069 - 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 70 41.03 -1 78858..79286 + 142 146291181 - Sputcn32_0070 - hypothetical protein 71 47.09 0 79288..81111 - 607 146291182 - Sputcn32_0071 - glycerophosphoryl diester phosphodiesterase 72 37.97 -1 81271..81615 + 114 146291183 - Sputcn32_0072 - hypothetical protein 73 44.88 0 81838..82374 + 178 146291184 - Sputcn32_0073 - hypothetical protein 74 36.41 -2 82489..82845 + 118 146291185 - Sputcn32_0074 - hypothetical protein 75 45.14 0 83012..83443 + 143 146291186 - Sputcn32_0075 - MarR family transcriptional regulator 76 47.49 0 83522..84277 + 251 146291187 - Sputcn32_0076 - siderophore-interacting protein 77 50.69 +1 84375..85601 - 408 146291188 - Sputcn32_0077 - imidazolonepropionase 78 51.55 +1 85836..86543 + 235 146291189 - Sputcn32_0078 - histidine utilization repressor 79 54.26 +2 86685..88352 + 555 146291190 - Sputcn32_0079 - urocanate hydratase 80 51.62 +1 88405..89946 + 513 146291191 - Sputcn32_0080 - histidine ammonia-lyase 81 47.28 0 90072..91319 - 415 146291192 - Sputcn32_0081 - gamma-glutamyl phosphate reductase 82 45.78 0 91337..92437 - 366 146291193 - Sputcn32_0082 - gamma-glutamyl kinase 83 45.29 0 92446..93942 - 498 146291194 - Sputcn32_0083 - sodium/proline symporter 84 47.64 0 94554..95909 - 451 146291195 - Sputcn32_0084 - glutathione reductase 85 43.60 0 96040..96594 - 184 146291196 - Sputcn32_0085 - hypothetical protein 86 41.77 0 96810..97508 - 232 146291197 - Sputcn32_0086 - hypothetical protein 87 47.45 0 97818..99857 + 679 146291198 - Sputcn32_0087 - oligopeptidase A 88 44.63 0 100033..100563 + 176 146291199 - Sputcn32_0088 - hypothetical protein 89 40.59 -1 100589..101236 - 215 146291200 - Sputcn32_0089 - glutathione S-transferase domain-containing protein 90 48.43 0 102007..103152 + 381 146291201 - Sputcn32_0090 - RND family efflux transporter MFP subunit 91 47.56 0 103162..106296 + 1044 146291202 - Sputcn32_0091 - hydrophobe/amphiphile efflux-1 (HAE1) family protein 92 46.18 0 106425..106712 + 95 146291203 - Sputcn32_0092 - hypothetical protein 93 45.17 0 106745..107065 + 106 146291204 - Sputcn32_0093 - hypothetical protein 94 48.57 +1 107146..108681 - 511 146291205 - Sputcn32_0094 - AbgT putative transporter 95 39.72 -1 109245..109808 + 187 146291206 - Sputcn32_0095 - LemA family protein 96 42.93 0 109915..110664 + 249 146291207 - Sputcn32_0096 - lytic transglycosylase, catalytic 97 48.48 +1 110661..110825 - 54 146291208 - Sputcn32_0097 - hypothetical protein 98 46.81 0 110989..111834 - 281 146291209 - Sputcn32_0098 - hypothetical protein 99 41.02 -1 111971..114235 - 754 146291210 - Sputcn32_0099 - diguanylate cyclase/phosphodiesterase 100 47.69 0 114456..115235 + 259 146291211 - Sputcn32_0100 - hypothetical protein 101 32.51 -2 115816..116181 + 121 146291212 - Sputcn32_0101 - hypothetical protein 102 45.31 0 116375..116800 + 141 146291213 - Sputcn32_0102 - hypothetical protein 103 43.99 0 116931..117221 + 96 146291214 - Sputcn32_0103 - hypothetical protein 104 46.77 0 117266..120436 - 1056 146291215 - Sputcn32_0104 - acriflavin resistance protein 105 48.81 +1 120441..121487 - 348 146291216 - Sputcn32_0105 - RND family efflux transporter MFP subunit 106 45.04 0 121532..123718 - 728 146291217 - Sputcn32_0106 - TonB-dependent siderophore receptor 107 46.64 0 124135..125457 - 440 146291218 - Sputcn32_0107 - peptidase M48, Ste24p 108 46.64 0 125794..126432 + 212 146291219 - Sputcn32_0108 - hypothetical protein 109 46.30 0 126451..126882 + 143 146291220 - Sputcn32_0109 - glyoxalase/bleomycin resistance protein/dioxygenase 110 45.14 0 126879..127505 - 208 146291221 - Sputcn32_0110 - hypothetical protein 111 50.67 +1 127621..128583 - 320 146291222 - Sputcn32_0111 - LysR family transcriptional regulator 112 52.00 +1 128733..129482 + 249 146291223 fabG Sputcn32_0112 - 3-ketoacyl-(acyl-carrier-protein) reductase 113 46.96 0 129778..130188 + 136 146291224 - Sputcn32_0113 - hypothetical protein 114 50.47 +1 130468..132579 + 703 146291225 - Sputcn32_0114 - cytochrome c biogenesis protein, transmembrane region 115 48.12 0 132749..133573 + 274 146291226 - Sputcn32_0115 - DSBA oxidoreductase 116 45.90 0 133599..134123 + 174 146291227 - Sputcn32_0116 - redoxin domain-containing protein 117 44.78 0 134168..134560 + 130 146291228 - Sputcn32_0117 - hypothetical protein 118 44.76 0 134709..135977 + 422 146291229 - Sputcn32_0118 - MscS mechanosensitive ion channel 119 44.39 0 135974..136597 - 207 146291230 - Sputcn32_0119 - lysine exporter protein LysE/YggA 120 48.23 0 136618..137181 - 187 146291231 - Sputcn32_0120 - phospholipid/glycerol acyltransferase 121 43.27 0 137302..137754 + 150 146291232 - Sputcn32_0121 - hypothetical protein 122 45.47 0 137763..138545 - 260 146291233 - Sputcn32_0122 - hypothetical protein 123 45.48 0 138608..140221 - 537 146291234 - Sputcn32_0123 - hypothetical protein 124 46.13 0 140628..141221 + 197 146291235 - Sputcn32_0124 - multiple antibiotic resistance (MarC)-related protein 125 45.63 0 141509..144118 + 869 146291236 - Sputcn32_0125 - peptidase M6, immune inhibitor A 126 47.42 0 144195..144755 - 186 146291237 - Sputcn32_0126 - chorismate lyase 127 39.72 -1 144870..145292 + 140 146291238 - Sputcn32_0127 - flagellar basal body-associated protein FliL-like protein 128 44.04 0 145349..146422 + 357 146291239 - Sputcn32_0128 - putative SAM-dependent methyltransferase 129 41.18 0 146543..147205 - 220 146291240 - Sputcn32_0129 - hypothetical protein 130 45.45 0 147273..148031 - 252 146291241 - Sputcn32_0130 - molybdopterin biosynthesis protein MoeB 131 48.96 +1 148044..149297 - 417 146291242 - Sputcn32_0131 - molybdenum cofactor synthesis domain-containing protein 132 43.20 0 149639..150175 + 178 146291243 - Sputcn32_0132 - Ferritin, Dps family protein 133 43.38 0 150238..153471 - 1077 146291244 - Sputcn32_0133 - diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) 134 48.17 0 154012..154665 - 217 146291245 - Sputcn32_0134 - 3,4-dihydroxy-2-butanone 4-phosphate synthase 135 46.44 0 155253..157388 + 711 146291246 - Sputcn32_0135 - oligopeptidase B 136 49.55 +1 157399..157842 + 147 146291247 - Sputcn32_0136 - excinuclease ABC subunit C 137 36.06 -2 158259..159137 + 292 146291248 - Sputcn32_0137 - hypothetical protein 138 32.90 -2 159624..160316 - 230 146291249 - Sputcn32_0138 - hypothetical protein 139 42.80 0 160379..160621 - 80 146291250 - Sputcn32_0139 - hypothetical protein 140 39.80 -1 160649..160849 - 66 146291251 - Sputcn32_0140 - hypothetical protein 141 44.70 0 161124..161897 - 257 146291252 - Sputcn32_0141 - putative lipoprotein 142 46.48 0 162172..162939 + 255 146291253 - Sputcn32_0142 - methyltransferase type 12 143 46.84 0 162965..164956 - 663 146291254 - Sputcn32_0143 - peptidase M14, carboxypeptidase A 144 45.07 0 165116..166231 - 371 146291255 - Sputcn32_0144 - hypothetical protein 145 46.04 0 166470..167720 - 416 146291256 - Sputcn32_0145 - sodium:dicarboxylate symporter 146 42.77 0 168175..168672 - 165 146291257 - Sputcn32_0146 - hypothetical protein 147 48.53 +1 168674..170233 - 519 146291258 - Sputcn32_0147 - AbgT putative transporter 148 42.86 0 170535..172130 + 531 146291259 - Sputcn32_0148 - hypothetical protein 149 48.35 0 172225..175374 - 1049 146291260 - Sputcn32_0149 - CzcA family heavy metal efflux protein 150 49.22 +1 175384..176913 - 509 146291261 - Sputcn32_0150 - RND family efflux transporter MFP subunit 151 47.89 0 176935..177195 - 86 146291262 - Sputcn32_0151 - copper-transporting ATPase domain-containing protein 152 49.40 +1 177414..177911 - 165 146291263 - Sputcn32_0152 - hypothetical protein 153 45.07 0 177983..178408 - 141 146291264 - Sputcn32_0153 - phage integrase family site specific recombinase 154 45.25 0 178519..179223 + 234 146291265 - Sputcn32_0154 - site-specific DNA-methyltransferase, type I modification 155 36.70 -2 179220..180854 - 544 146291266 - Sputcn32_0155 - AAA ATPase 156 41.33 0 180847..181659 - 270 146291267 - Sputcn32_0156 - hypothetical protein 157 41.57 0 181665..184955 - 1096 146291268 - Sputcn32_0157 - HsdR family type I site-specific deoxyribonuclease 158 36.32 -2 184966..186303 - 445 146291269 - Sputcn32_0158 - KAP P-loop domain-containing protein 159 37.80 -1 186313..187701 - 462 146291270 - Sputcn32_0159 - deoxyguanosinetriphosphate triphosphohydrolase-like protein 160 38.92 -1 187701..188900 - 399 146291271 - Sputcn32_0160 - restriction modification system DNA specificity subunit 161 43.39 0 188890..190410 - 506 146291272 - Sputcn32_0161 - type I restriction-modification system, M subunit 162 42.28 0 190451..191065 - 204 146291273 - Sputcn32_0162 - hypothetical protein 44.78 MEAN 3.68 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0