version 1.0
Shewanella putrefaciens CN-32, complete genome - 1..4659220 3972 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1022 48.49 +1 1149071..1150897 + 608 146292133 - Sputcn32_1030 - pyruvate carboxylase subunit B 1023 46.15 0 1150906..1152036 + 376 146292134 - Sputcn32_1031 - sodium ion-translocating decarboxylase, beta subunit 1024 37.50 -1 1152077..1152244 - 55 146292135 - Sputcn32_1032 - hypothetical protein 1025 44.52 0 1152418..1153677 - 419 146292136 - Sputcn32_1033 - sodium:dicarboxylate symporter 1026 43.90 0 1154052..1154477 + 141 146292137 - Sputcn32_1034 - hypothetical protein 1027 44.23 0 1154627..1157461 + 944 146292138 - Sputcn32_1035 - peptidase M16 domain-containing protein 1028 42.79 0 1157647..1159296 + 549 146292139 - Sputcn32_1036 - glutamate--cysteine ligase 1029 45.95 0 1159314..1159757 + 147 146292140 - Sputcn32_1037 - hypothetical protein 1030 44.34 0 1159765..1160382 + 205 146292141 - Sputcn32_1038 - hypothetical protein 1031 40.03 -1 1160475..1161743 - 422 146292142 - Sputcn32_1039 - diguanylate cyclase 1032 46.81 0 1161896..1162993 - 365 146292143 - Sputcn32_1040 - phosphoribosylaminoimidazole carboxylase ATPase subunit 1033 49.39 +1 1162993..1163484 - 163 146292144 - Sputcn32_1041 - phosphoribosylaminoimidazole carboxylase, catalytic subunit 1034 46.19 0 1163764..1165521 - 585 146292145 - Sputcn32_1042 - putative sulfate transporter YchM 1035 43.27 0 1165724..1167625 + 633 146292146 - Sputcn32_1043 - von Willebrand factor, type A 1036 44.06 0 1167712..1168317 + 201 146292147 - Sputcn32_1044 - ECF subfamily RNA polymerase sigma-24 factor 1037 42.99 0 1168310..1169065 + 251 146292148 - Sputcn32_1045 - hypothetical protein 1038 38.55 -1 1169287..1169823 + 178 146292149 - Sputcn32_1046 - hemerythrin HHE cation binding domain-containing protein 1039 39.78 -1 1169917..1170102 - 61 146292150 - Sputcn32_1047 - hypothetical protein 1040 44.02 0 1170319..1171956 - 545 146292151 pgi Sputcn32_1048 - glucose-6-phosphate isomerase 1041 42.95 0 1171977..1172933 - 318 146292152 - Sputcn32_1049 - transaldolase B 1042 43.60 0 1173183..1174283 - 366 146292153 - Sputcn32_1050 - OmpA/MotB domain-containing protein 1043 42.71 0 1174537..1176903 - 788 146292154 - Sputcn32_1051 - putative phosphoketolase 1044 42.88 0 1177331..1178776 + 481 146292155 - Sputcn32_1052 - amino acid carrier protein 1045 39.02 -1 1178906..1179679 + 257 146292156 - Sputcn32_1053 - hypothetical protein 1046 43.97 0 1179739..1181148 - 469 146292157 - Sputcn32_1054 - peptidase M28 1047 39.06 -1 1181284..1181580 + 98 146292158 - Sputcn32_1055 - regulatory protein, ArsR 1048 44.94 0 1181636..1181902 - 88 146292159 rpsT Sputcn32_1056 - 30S ribosomal protein S20 1049 42.69 0 1182155..1183714 + 519 146292160 - Sputcn32_1057 - integral membrane protein MviN 1050 44.55 0 1183780..1184715 + 311 146292161 - Sputcn32_1058 - riboflavin biosynthesis protein RibF 1051 46.72 0 1184748..1187570 + 940 146292162 - Sputcn32_1059 - isoleucyl-tRNA synthetase 1052 43.02 0 1187580..1188095 + 171 146292163 - Sputcn32_1060 - lipoprotein signal peptidase 1053 46.57 0 1188092..1188514 + 140 146292164 - Sputcn32_1061 - peptidylprolyl isomerase, FKBP-type 1054 45.77 0 1188516..1189472 + 318 146292165 - Sputcn32_1062 - hydroxymethylbutenyl pyrophosphate reductase 1055 43.48 0 1189689..1190240 + 183 146292166 - Sputcn32_1063 - type IV pilus modification protein PilV 1056 39.94 -1 1190241..1191224 + 327 146292167 - Sputcn32_1064 - prepilin-type cleavage/methylation-like protein 1057 43.45 0 1191237..1191671 + 144 146292168 - Sputcn32_1065 - type IV pilus assembly protein PilX 1058 38.42 -1 1191676..1195173 + 1165 146292169 - Sputcn32_1066 - type IV pilin biogenesis protein, putative 1059 42.24 0 1195180..1195572 + 130 146292170 - Sputcn32_1067 - methylation site containing protein 1060 36.36 -2 1195569..1195865 + 98 146292171 - Sputcn32_1068 - hypothetical protein 1061 37.24 -2 1195969..1196454 - 161 146292172 - Sputcn32_1069 - methylation site containing protein 1062 38.60 -1 1196604..1197116 - 170 146292173 - Sputcn32_1070 - methylation site containing protein 1063 41.00 -1 1197367..1197705 + 112 146292174 - Sputcn32_1071 - nitrogen regulatory protein P-II 1064 40.93 -1 1197893..1199182 + 429 146292175 - Sputcn32_1072 - NADH dehydrogenase 1065 39.33 -1 1199246..1200262 - 338 146292176 - Sputcn32_1073 - regulatory protein, LacI 1066 39.48 -1 1200687..1203305 + 872 146292177 - Sputcn32_1074 - TonB-dependent receptor 1067 48.28 0 1203560..1206262 + 900 146292178 - Sputcn32_1075 - Beta-N-acetylhexosaminidase 1068 49.32 +1 1206463..1207419 + 318 146292179 - Sputcn32_1076 - ATPase, BadF/BadG/BcrA/BcrD type 1069 50.65 +1 1207437..1208435 + 332 146292180 - Sputcn32_1077 - glutamine--fructose-6-phosphate transaminase (isomerizing) 1070 52.14 +2 1208569..1209738 + 389 146292181 - Sputcn32_1078 - N-acetylglucosamine-6-phosphate deacetylase 1071 48.57 +1 1209895..1211049 + 384 146292182 - Sputcn32_1079 - hypothetical protein 1072 46.04 0 1211367..1212665 + 432 146292183 - Sputcn32_1080 - glucose/galactose transporter 1073 44.67 0 1212789..1213511 - 240 146292184 - Sputcn32_1081 - hypothetical protein 1074 44.54 0 1213695..1214060 - 121 146292185 - Sputcn32_1082 - protein of unknown function DUF861, cupin_3 1075 51.78 +1 1214091..1215581 - 496 146292186 - Sputcn32_1083 - methylmalonate-semialdehyde dehydrogenase 1076 50.15 +1 1215651..1216988 - 445 146292187 - Sputcn32_1084 - beta alanine--pyruvate transaminase 1077 50.90 +1 1217269..1218765 + 498 146292188 - Sputcn32_1085 - aldehyde dehydrogenase 1078 41.67 0 1219469..1219672 + 67 146292189 - Sputcn32_1086 - hypothetical protein 1079 40.10 -1 1220859..1221272 + 137 146292190 - Sputcn32_1087 - rare lipoprotein A 1080 49.42 +1 1221466..1222323 + 285 146292191 - Sputcn32_1088 - 3-mercaptopyruvate sulfurtransferase 1081 44.31 0 1222383..1222892 + 169 146292192 - Sputcn32_1089 - hypothetical protein 1082 47.94 0 1223019..1224326 - 435 146292193 - Sputcn32_1090 - FAD dependent oxidoreductase 1083 41.89 0 1224563..1225111 + 182 146292194 - Sputcn32_1091 - XRE family transcriptional regulator 1084 47.11 0 1225519..1226280 + 253 146292195 - Sputcn32_1092 - peptidase C26 1085 44.40 0 1226283..1227638 + 451 146292196 - Sputcn32_1093 - glutamate--ammonia ligase 1086 41.69 0 1228259..1229359 + 366 146292197 - Sputcn32_1094 - extracellular solute-binding protein 1087 45.29 0 1229534..1230670 + 378 146292198 - Sputcn32_1095 - spermidine/putrescine ABC transporter ATPase subunit 1088 42.16 0 1230667..1231572 + 301 146292199 - Sputcn32_1096 - binding-protein-dependent transport systems inner membrane component 1089 45.96 0 1231569..1232384 + 271 146292200 - Sputcn32_1097 - binding-protein-dependent transport systems inner membrane component 1090 49.49 +1 1232642..1233928 + 428 146292201 - Sputcn32_1098 - FAD dependent oxidoreductase 1091 49.34 +1 1233979..1235427 + 482 146292202 - Sputcn32_1099 - succinic semialdehyde dehydrogenase 1092 51.88 +1 1235460..1236737 + 425 146292203 - Sputcn32_1100 - 4-aminobutyrate aminotransferase 1093 49.21 +1 1236884..1237891 - 335 146292204 - Sputcn32_1101 - luciferase family protein 1094 46.86 0 1238409..1240049 - 546 146292205 - Sputcn32_1102 - amino acid/peptide transporter 1095 43.00 0 1240308..1242428 + 706 146292206 - Sputcn32_1103 - methyl-accepting chemotaxis sensory transducer 1096 45.92 0 1242929..1244779 - 616 146292207 - Sputcn32_1104 - RpoD family RNA polymerase sigma factor 1097 44.75 0 1244910..1246634 - 574 146292208 - Sputcn32_1105 - DNA primase 1098 46.85 0 1246718..1247161 - 147 146292209 - Sputcn32_1106 - GatB/Yqey domain-containing protein 1099 44.91 0 1247168..1247383 - 71 146292210 rpsU Sputcn32_1107 - 30S ribosomal protein S21 1100 47.89 0 1247602..1248618 + 338 146292211 - Sputcn32_1108 - metalloendopeptidase glycoprotease family 1101 46.24 0 1248697..1249308 - 203 146292212 - Sputcn32_1109 - putative glycerol-3-phosphate acyltransferase PlsY 1102 42.74 0 1249577..1249927 + 116 146292213 - Sputcn32_1110 - dihydroneopterin aldolase 1103 43.06 0 1250012..1250515 + 167 146292214 - Sputcn32_1111 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 1104 40.07 -1 1250534..1251334 + 266 146292215 - Sputcn32_1112 - undecaprenyl pyrophosphate phosphatase 1105 39.98 -1 1251419..1252276 + 285 146292216 - Sputcn32_1113 - rRNA (guanine-N(1)-)-methyltransferase 1106 44.19 0 1252482..1252748 - 88 146292217 - Sputcn32_1114 - major outer membrane lipoprotein, putative 1107 44.34 0 1252995..1254257 - 420 146292218 - Sputcn32_1115 - metal dependent phosphohydrolase 1108 43.21 0 1254412..1256091 + 559 146292219 - Sputcn32_1116 - peptidoglycan binding domain-containing protein 1109 45.51 0 1256091..1257158 + 355 146292220 - Sputcn32_1117 - general secretion pathway protein B 1110 40.46 -1 1257219..1258466 - 415 146292221 - Sputcn32_1118 - citrate transporter 1111 48.88 +1 1258880..1260172 - 430 146292222 - Sputcn32_1119 - glutamate-1-semialdehyde-2,1-aminomutase 1112 45.88 0 1260199..1261218 - 339 146292223 - Sputcn32_1120 - aspartate carbamoyltransferase 1113 46.61 0 1261442..1263166 - 574 146292224 - Sputcn32_1121 - Cl- channel, voltage-gated family protein 1114 40.64 -1 1263240..1264046 + 268 146292225 - Sputcn32_1122 - hypothetical protein 1115 45.58 0 1264039..1264389 + 116 146292226 - Sputcn32_1123 - iron-sulfur cluster insertion protein ErpA 1116 39.41 -1 1264487..1264930 - 147 146292227 - Sputcn32_1124 - hypothetical protein 1117 44.88 0 1264959..1265339 - 126 146292228 - Sputcn32_1125 - hypothetical protein 1118 47.30 0 1265593..1266702 - 369 146292229 anmK Sputcn32_1126 - anhydro-N-acetylmuramic acid kinase 1119 41.93 0 1266724..1268130 - 468 146292230 - Sputcn32_1127 - peptidase M23B 1120 44.81 0 1268257..1269450 + 397 146292231 - Sputcn32_1128 - tyrosyl-tRNA synthetase 1121 43.36 0 1269573..1270001 - 142 146292232 - Sputcn32_1129 - hypothetical protein 44.78 MEAN 3.68 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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