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Shewanella putrefaciens CN-32, complete genome - 1..4659220 3972 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 997 48.82 +1 1119167..1120012 - 281 146292108 - Sputcn32_1004 - sulfate ABC transporter, inner membrane subunit CysT 998 44.84 0 1120199..1121206 - 335 146292109 - Sputcn32_1005 - sulfate ABC transporter, periplasmic sulfate-binding protein 999 49.72 +1 1121418..1122296 + 292 146292110 cysM Sputcn32_1006 - cysteine synthase B 1000 44.32 0 1122372..1122908 - 178 146292111 - Sputcn32_1007 - hypothetical protein 1001 47.90 0 1123080..1123388 + 102 146292112 - Sputcn32_1008 - hypothetical protein 1002 47.28 0 1123488..1124756 - 422 146292113 - Sputcn32_1009 - integral membrane sensor signal transduction histidine kinase 1003 44.40 0 1124766..1125479 - 237 146292114 - Sputcn32_1010 - two component transcriptional regulator 1004 42.03 0 1125479..1125892 - 137 146292115 - Sputcn32_1011 - hypothetical protein 1005 41.18 0 1125898..1126764 - 288 146292116 - Sputcn32_1012 - MltA-interacting MipA family protein 1006 42.62 0 1127143..1127379 - 78 146292117 - Sputcn32_1013 - hypothetical protein 1007 42.38 0 1128142..1128705 + 187 146292118 - Sputcn32_1014 - GPR1/FUN34/yaaH family protein 1008 40.98 -1 1128759..1129229 - 156 146292119 - Sputcn32_1015 - hypothetical protein 1009 46.28 0 1129424..1129840 - 138 146292120 - Sputcn32_1016 - glyoxalase/bleomycin resistance protein/dioxygenase 1010 45.20 0 1129897..1130511 - 204 146292121 - Sputcn32_1017 - NADPH-dependent FMN reductase 1011 46.45 0 1130658..1131290 + 210 146292122 - Sputcn32_1018 - putative transcriptional regulator 1012 42.62 0 1131352..1132062 + 236 146292123 - Sputcn32_1019 - pseudouridine synthase 1013 42.37 0 1132084..1133709 - 541 146292124 - Sputcn32_1020 - methyl-accepting chemotaxis sensory transducer 1014 41.86 0 1134461..1135222 - 253 146292125 - Sputcn32_1021 - putative lipoprotein 1015 47.49 0 1135345..1136319 + 324 146292126 - Sputcn32_1022 - RluA family pseudouridine synthase 1016 48.98 +1 1136320..1137054 + 244 146292127 - Sputcn32_1023 - hypothetical protein 1017 48.37 0 1137253..1139826 + 857 146292128 - Sputcn32_1024 - ATPase 1018 42.52 0 1139930..1140397 - 155 146292129 - Sputcn32_1025 - hypothetical protein 1019 44.01 0 1140493..1141344 + 283 146292130 - Sputcn32_1026 - CDP-diacylglycerol--serine O-phosphatidyltransferase 1020 46.67 0 1147970..1148344 + 124 146292131 - Sputcn32_1028 - ISSod10, transposase OrfB 1021 40.07 -1 1148793..1149059 + 88 146292132 - Sputcn32_1029 - sodium pump decarboxylase, gamma subunit 1022 48.49 +1 1149071..1150897 + 608 146292133 - Sputcn32_1030 - pyruvate carboxylase subunit B 1023 46.15 0 1150906..1152036 + 376 146292134 - Sputcn32_1031 - sodium ion-translocating decarboxylase, beta subunit 1024 37.50 -1 1152077..1152244 - 55 146292135 - Sputcn32_1032 - hypothetical protein 1025 44.52 0 1152418..1153677 - 419 146292136 - Sputcn32_1033 - sodium:dicarboxylate symporter 1026 43.90 0 1154052..1154477 + 141 146292137 - Sputcn32_1034 - hypothetical protein 1027 44.23 0 1154627..1157461 + 944 146292138 - Sputcn32_1035 - peptidase M16 domain-containing protein 1028 42.79 0 1157647..1159296 + 549 146292139 - Sputcn32_1036 - glutamate--cysteine ligase 1029 45.95 0 1159314..1159757 + 147 146292140 - Sputcn32_1037 - hypothetical protein 1030 44.34 0 1159765..1160382 + 205 146292141 - Sputcn32_1038 - hypothetical protein 1031 40.03 -1 1160475..1161743 - 422 146292142 - Sputcn32_1039 - diguanylate cyclase 1032 46.81 0 1161896..1162993 - 365 146292143 - Sputcn32_1040 - phosphoribosylaminoimidazole carboxylase ATPase subunit 1033 49.39 +1 1162993..1163484 - 163 146292144 - Sputcn32_1041 - phosphoribosylaminoimidazole carboxylase, catalytic subunit 1034 46.19 0 1163764..1165521 - 585 146292145 - Sputcn32_1042 - putative sulfate transporter YchM 1035 43.27 0 1165724..1167625 + 633 146292146 - Sputcn32_1043 - von Willebrand factor, type A 1036 44.06 0 1167712..1168317 + 201 146292147 - Sputcn32_1044 - ECF subfamily RNA polymerase sigma-24 factor 1037 42.99 0 1168310..1169065 + 251 146292148 - Sputcn32_1045 - hypothetical protein 1038 38.55 -1 1169287..1169823 + 178 146292149 - Sputcn32_1046 - hemerythrin HHE cation binding domain-containing protein 1039 39.78 -1 1169917..1170102 - 61 146292150 - Sputcn32_1047 - hypothetical protein 1040 44.02 0 1170319..1171956 - 545 146292151 pgi Sputcn32_1048 - glucose-6-phosphate isomerase 1041 42.95 0 1171977..1172933 - 318 146292152 - Sputcn32_1049 - transaldolase B 1042 43.60 0 1173183..1174283 - 366 146292153 - Sputcn32_1050 - OmpA/MotB domain-containing protein 1043 42.71 0 1174537..1176903 - 788 146292154 - Sputcn32_1051 - putative phosphoketolase 1044 42.88 0 1177331..1178776 + 481 146292155 - Sputcn32_1052 - amino acid carrier protein 1045 39.02 -1 1178906..1179679 + 257 146292156 - Sputcn32_1053 - hypothetical protein 1046 43.97 0 1179739..1181148 - 469 146292157 - Sputcn32_1054 - peptidase M28 1047 39.06 -1 1181284..1181580 + 98 146292158 - Sputcn32_1055 - regulatory protein, ArsR 1048 44.94 0 1181636..1181902 - 88 146292159 rpsT Sputcn32_1056 - 30S ribosomal protein S20 1049 42.69 0 1182155..1183714 + 519 146292160 - Sputcn32_1057 - integral membrane protein MviN 1050 44.55 0 1183780..1184715 + 311 146292161 - Sputcn32_1058 - riboflavin biosynthesis protein RibF 1051 46.72 0 1184748..1187570 + 940 146292162 - Sputcn32_1059 - isoleucyl-tRNA synthetase 1052 43.02 0 1187580..1188095 + 171 146292163 - Sputcn32_1060 - lipoprotein signal peptidase 1053 46.57 0 1188092..1188514 + 140 146292164 - Sputcn32_1061 - peptidylprolyl isomerase, FKBP-type 1054 45.77 0 1188516..1189472 + 318 146292165 - Sputcn32_1062 - hydroxymethylbutenyl pyrophosphate reductase 1055 43.48 0 1189689..1190240 + 183 146292166 - Sputcn32_1063 - type IV pilus modification protein PilV 1056 39.94 -1 1190241..1191224 + 327 146292167 - Sputcn32_1064 - prepilin-type cleavage/methylation-like protein 1057 43.45 0 1191237..1191671 + 144 146292168 - Sputcn32_1065 - type IV pilus assembly protein PilX 1058 38.42 -1 1191676..1195173 + 1165 146292169 - Sputcn32_1066 - type IV pilin biogenesis protein, putative 1059 42.24 0 1195180..1195572 + 130 146292170 - Sputcn32_1067 - methylation site containing protein 1060 36.36 -2 1195569..1195865 + 98 146292171 - Sputcn32_1068 - hypothetical protein 1061 37.24 -2 1195969..1196454 - 161 146292172 - Sputcn32_1069 - methylation site containing protein 1062 38.60 -1 1196604..1197116 - 170 146292173 - Sputcn32_1070 - methylation site containing protein 1063 41.00 -1 1197367..1197705 + 112 146292174 - Sputcn32_1071 - nitrogen regulatory protein P-II 1064 40.93 -1 1197893..1199182 + 429 146292175 - Sputcn32_1072 - NADH dehydrogenase 1065 39.33 -1 1199246..1200262 - 338 146292176 - Sputcn32_1073 - regulatory protein, LacI 1066 39.48 -1 1200687..1203305 + 872 146292177 - Sputcn32_1074 - TonB-dependent receptor 1067 48.28 0 1203560..1206262 + 900 146292178 - Sputcn32_1075 - Beta-N-acetylhexosaminidase 1068 49.32 +1 1206463..1207419 + 318 146292179 - Sputcn32_1076 - ATPase, BadF/BadG/BcrA/BcrD type 1069 50.65 +1 1207437..1208435 + 332 146292180 - Sputcn32_1077 - glutamine--fructose-6-phosphate transaminase (isomerizing) 1070 52.14 +2 1208569..1209738 + 389 146292181 - Sputcn32_1078 - N-acetylglucosamine-6-phosphate deacetylase 1071 48.57 +1 1209895..1211049 + 384 146292182 - Sputcn32_1079 - hypothetical protein 1072 46.04 0 1211367..1212665 + 432 146292183 - Sputcn32_1080 - glucose/galactose transporter 1073 44.67 0 1212789..1213511 - 240 146292184 - Sputcn32_1081 - hypothetical protein 1074 44.54 0 1213695..1214060 - 121 146292185 - Sputcn32_1082 - protein of unknown function DUF861, cupin_3 1075 51.78 +1 1214091..1215581 - 496 146292186 - Sputcn32_1083 - methylmalonate-semialdehyde dehydrogenase 1076 50.15 +1 1215651..1216988 - 445 146292187 - Sputcn32_1084 - beta alanine--pyruvate transaminase 1077 50.90 +1 1217269..1218765 + 498 146292188 - Sputcn32_1085 - aldehyde dehydrogenase 1078 41.67 0 1219469..1219672 + 67 146292189 - Sputcn32_1086 - hypothetical protein 1079 40.10 -1 1220859..1221272 + 137 146292190 - Sputcn32_1087 - rare lipoprotein A 1080 49.42 +1 1221466..1222323 + 285 146292191 - Sputcn32_1088 - 3-mercaptopyruvate sulfurtransferase 1081 44.31 0 1222383..1222892 + 169 146292192 - Sputcn32_1089 - hypothetical protein 1082 47.94 0 1223019..1224326 - 435 146292193 - Sputcn32_1090 - FAD dependent oxidoreductase 1083 41.89 0 1224563..1225111 + 182 146292194 - Sputcn32_1091 - XRE family transcriptional regulator 1084 47.11 0 1225519..1226280 + 253 146292195 - Sputcn32_1092 - peptidase C26 1085 44.40 0 1226283..1227638 + 451 146292196 - Sputcn32_1093 - glutamate--ammonia ligase 1086 41.69 0 1228259..1229359 + 366 146292197 - Sputcn32_1094 - extracellular solute-binding protein 1087 45.29 0 1229534..1230670 + 378 146292198 - Sputcn32_1095 - spermidine/putrescine ABC transporter ATPase subunit 1088 42.16 0 1230667..1231572 + 301 146292199 - Sputcn32_1096 - binding-protein-dependent transport systems inner membrane component 1089 45.96 0 1231569..1232384 + 271 146292200 - Sputcn32_1097 - binding-protein-dependent transport systems inner membrane component 1090 49.49 +1 1232642..1233928 + 428 146292201 - Sputcn32_1098 - FAD dependent oxidoreductase 1091 49.34 +1 1233979..1235427 + 482 146292202 - Sputcn32_1099 - succinic semialdehyde dehydrogenase 1092 51.88 +1 1235460..1236737 + 425 146292203 - Sputcn32_1100 - 4-aminobutyrate aminotransferase 1093 49.21 +1 1236884..1237891 - 335 146292204 - Sputcn32_1101 - luciferase family protein 1094 46.86 0 1238409..1240049 - 546 146292205 - Sputcn32_1102 - amino acid/peptide transporter 1095 43.00 0 1240308..1242428 + 706 146292206 - Sputcn32_1103 - methyl-accepting chemotaxis sensory transducer 1096 45.92 0 1242929..1244779 - 616 146292207 - Sputcn32_1104 - RpoD family RNA polymerase sigma factor 44.78 MEAN 3.68 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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