IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
751	 49.75	+1	931409..932596	+	395	157960581	-	Spea_0753	-	chromate transporter
752	 51.24	+1	932673..936995	-	1440	157960582	-	Spea_0754	-	formate dehydrogenase, alpha subunit
753	 48.14	0	937293..938285	-	330	157960583	-	Spea_0755	-	Ion transport 2 domain-containing protein
754	 47.39	0	938835..939716	+	293	157960584	-	Spea_0756	-	peptide chain release factor 2
755	 46.88	0	939729..941234	+	501	157960585	-	Spea_0757	-	lysyl-tRNA synthetase
756	 47.02	0	941881..944400	+	839	157960586	-	Spea_0758	-	diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
757	 49.16	+1	944422..945015	-	197	157960587	-	Spea_0759	-	pseudouridine synthase
758	 46.09	0	945297..946088	+	263	157960588	-	Spea_0760	-	glucosamine-6-phosphate isomerase
759	 44.38	0	946690..947232	+	180	157960589	-	Spea_0761	-	hypothetical protein
760	 48.36	0	947312..947983	+	223	157960590	-	Spea_0762	-	nitroreductase
761	 45.60	0	948023..948340	+	105	157960591	-	Spea_0763	-	cupin family protein
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