IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
743	 49.19	+1	921814..922557	+	247	157960573	-	Spea_0745	-	spermine synthase
744	 46.49	0	923053..923622	+	189	157960574	-	Spea_0746	-	alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
745	 48.63	+1	923915..925489	+	524	157960575	-	Spea_0747	-	FAD-dependent pyridine nucleotide-disulphide oxidoreductase
746	 41.67	-1	925608..926735	+	375	157960576	-	Spea_0748	-	diguanylate cyclase
747	 47.98	0	926794..926991	-	65	157960577	-	Spea_0749	-	hypothetical protein
748	 49.16	+1	927428..928855	-	475	157960578	-	Spea_0750	-	hypothetical protein
749	 45.80	0	929175..929591	-	138	157960579	-	Spea_0751	-	hypothetical protein
750	 50.34	+1	930076..931251	+	391	157960580	-	Spea_0752	-	FAD dependent oxidoreductase
751	 49.75	+1	931409..932596	+	395	157960581	-	Spea_0753	-	chromate transporter
752	 51.24	+1	932673..936995	-	1440	157960582	-	Spea_0754	-	formate dehydrogenase, alpha subunit
753	 48.14	0	937293..938285	-	330	157960583	-	Spea_0755	-	Ion tran