version 1.0
Shewanella pealeana ATCC 700345, complete genome - 1..5174581 4241 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 723 42.99 0 899535..900539 + 334 157960553 - Spea_0725 - basic membrane lipoprotein 724 45.21 0 900666..902282 + 538 157960554 - Spea_0726 - ABC transporter related 725 47.30 0 902279..903409 + 376 157960555 - Spea_0727 - inner-membrane translocator 726 50.62 +1 903413..904378 + 321 157960556 - Spea_0728 - inner-membrane translocator 727 37.65 -2 904899..905315 + 138 157960557 - Spea_0729 - hypothetical protein 728 38.67 -1 905386..905985 + 199 157960558 - Spea_0730 - hypothetical protein 729 47.68 0 906550..907539 - 329 157960559 - Spea_0731 - fructose-1,6-bisphosphatase 730 48.60 +1 907792..910038 + 748 157960560 - Spea_0732 - peptidase S9B dipeptidylpeptidase IV subunit 731 44.07 0 910471..911187 - 238 157960561 - Spea_0733 - two-component response regulator 732 43.14 0 911749..912105 + 118 157960562 - Spea_0734 - hypothetical protein 733 50.69 +1 912895..914265 + 456 157960563 - Spea_0735 - aspartate kinase III 734 49.14 +1 914301..915407 + 368 157960564 - Spea_0736 - succinylglutamate desuccinylase/aspartoacylase 735 45.24 0 915685..916146 - 153 157960565 - Spea_0737 - DNA-binding transcriptional regulator AsnC 736 48.97 +1 916411..917088 - 225 157960566 - Spea_0738 - pseudouridine synthase 737 47.42 0 917202..917492 - 96 157960567 - Spea_0739 - hypothetical protein 738 47.13 0 917531..918052 - 173 157960568 - Spea_0740 - methyltransferase type 12 739 47.20 0 918057..918467 - 136 157960569 - Spea_0741 - hypothetical protein 740 47.07 0 919122..920111 + 329 157960570 - Spea_0742 - D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding 741 48.51 +1 920124..920861 + 245 157960571 - Spea_0743 - dienelactone hydrolase 742 44.57 0 920984..921517 - 177 157960572 - Spea_0744 - hypothetical protein 743 49.19 +1 921814..922557 + 247 157960573 - Spea_0745 - spermine synthase 744 46.49 0 923053..923622 + 189 157960574 - Spea_0746 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 745 48.63 +1 923915..925489 + 524 157960575 - Spea_0747 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 746 41.67 -1 925608..926735 + 375 157960576 - Spea_0748 - diguanylate cyclase 747 47.98 0 926794..926991 - 65 157960577 - Spea_0749 - hypothetical protein 748 49.16 +1 927428..928855 - 475 157960578 - Spea_0750 - hypothetical protein 749 45.80 0 929175..929591 - 138 157960579 - Spea_0751 - hypothetical protein 750 50.34 +1 930076..931251 + 391 157960580 - Spea_0752 - FAD dependent oxidoreductase 751 49.75 +1 931409..932596 + 395 157960581 - Spea_0753 - chromate transporter 752 51.24 +1 932673..936995 - 1440 157960582 - Spea_0754 - formate dehydrogenase, alpha subunit 753 48.14 0 937293..938285 - 330 157960583 - Spea_0755 - Ion transport 2 domain-containing protein 754 47.39 0 938835..939716 + 293 157960584 - Spea_0756 - peptide chain release factor 2 755 46.88 0 939729..941234 + 501 157960585 - Spea_0757 - lysyl-tRNA synthetase 756 47.02 0 941881..944400 + 839 157960586 - Spea_0758 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 757 49.16 +1 944422..945015 - 197 157960587 - Spea_0759 - pseudouridine synthase 758 46.09 0 945297..946088 + 263 157960588 - Spea_0760 - glucosamine-6-phosphate isomerase 759 44.38 0 946690..947232 + 180 157960589 - Spea_0761 - hypothetical protein 760 48.36 0 947312..947983 + 223 157960590 - Spea_0762 - nitroreductase 761 45.60 0 948023..948340 + 105 157960591 - Spea_0763 - cupin family protein 762 47.90 0 948489..950438 + 649 157960592 - Spea_0764 - peptidase U32 763 42.93 0 950515..950889 + 124 157960593 - Spea_0765 - hypothetical protein 764 51.45 +1 951008..951454 - 148 157960594 - Spea_0766 - Fe-S metabolism associated SufE 765 50.25 +1 951760..952971 - 403 157960595 - Spea_0767 - SufS subfamily cysteine desulfurase 766 48.47 +1 953172..954215 - 347 157960596 - Spea_0768 - aldo/keto reductase 767 46.92 0 954341..955282 - 313 157960597 - Spea_0769 - MarR family transcriptional regulator 768 48.52 +1 955376..955915 - 179 157960598 - Spea_0770 - NTPase 769 43.36 0 956473..957759 + 428 157960599 - Spea_0771 - aromatic amino acid permease 770 46.35 0 957934..959301 + 455 157960600 - Spea_0772 - L-serine dehydratase 1 771 47.07 0 959385..959828 - 147 157960601 - Spea_0773 - GCN5-related N-acetyltransferase 772 47.08 0 959968..960258 + 96 157960602 - Spea_0774 - hypothetical protein 773 46.11 0 960429..961727 + 432 157960603 - Spea_0775 - sodium:dicarboxylate symporter 774 43.00 0 962027..962440 - 137 157960604 - Spea_0776 - protein of unknown function DUF306 Meta and HslJ 775 42.38 0 962519..962728 + 69 157960605 - Spea_0777 - hypothetical protein 776 47.57 0 962918..963865 - 315 157960606 - Spea_0778 - diguanylate cyclase 777 46.77 0 964148..964705 + 185 157960607 - Spea_0779 - GCN5-related N-acetyltransferase 778 42.74 0 964714..965064 + 116 157960608 - Spea_0780 - hypothetical protein 779 41.71 -1 965349..965885 - 178 157960609 - Spea_0781 - hypothetical protein 780 44.64 0 966376..967074 + 232 157960610 - Spea_0782 - hypothetical protein 781 37.25 -2 967539..968558 - 339 157960611 - Spea_0783 - hypothetical protein 782 41.18 -1 969568..970395 + 275 157960612 - Spea_0784 - hypothetical protein 783 40.58 -1 970701..971528 + 275 157960613 - Spea_0785 - hypothetical protein 784 44.73 0 971651..972124 - 157 157960614 - Spea_0786 - GCN5-related N-acetyltransferase 785 47.71 0 972502..973656 - 384 157960615 - Spea_0787 - S-adenosylmethionine synthetase 786 49.05 +1 974163..976154 + 663 157960616 - Spea_0788 - transketolase 787 47.35 0 976253..977272 + 339 157960617 - Spea_0789 - erythrose 4-phosphate dehydrogenase 788 50.17 +1 977642..978817 + 391 157960618 - Spea_0790 - phosphoglycerate kinase 789 48.45 0 979126..980190 + 354 157960619 - Spea_0791 - fructose-1,6-bisphosphate aldolase 790 44.53 0 980408..981148 + 246 157960620 - Spea_0792 - hypothetical protein 791 38.15 -2 981469..982215 + 248 157960621 - Spea_0793 - putative transcriptional regulator, CadC 792 42.47 0 982334..982738 + 134 157960622 - Spea_0794 - hypothetical protein 793 45.40 0 982985..984418 + 477 157960623 - Spea_0795 - hypothetical protein 794 46.31 0 984632..986851 - 739 157960624 - Spea_0796 - putative diguanylate cyclase 795 46.80 0 986977..987585 - 202 157960625 - Spea_0797 - radical SAM domain-containing protein 796 41.41 -1 987772..988155 + 127 157960626 - Spea_0798 - transposase 797 43.62 0 988272..989000 + 242 157960627 - Spea_0799 - integrase catalytic region 798 48.74 +1 989039..992185 - 1048 157960628 - Spea_0800 - acriflavin resistance protein 799 47.22 0 992185..993444 - 419 157960629 - Spea_0801 - RND family efflux transporter MFP subunit 800 47.41 0 993624..994859 - 411 157960630 - Spea_0802 - ATP-dependent RNA helicase SrmB 801 48.43 0 994929..995723 - 264 157960631 - Spea_0803 - methyltransferase small 802 44.54 0 996241..997587 + 448 157960632 - Spea_0804 - branched-chain amino acid transport system II carrier protein 803 51.27 +1 998105..999007 + 300 157960633 - Spea_0805 - tyrosine recombinase XerD 804 45.73 0 999232..999957 + 241 157960634 - Spea_0806 - thiol:disulfide interchange protein DsbC 805 51.36 +1 1000125..1001849 + 574 157960635 - Spea_0807 - single-stranded-DNA-specific exonuclease RecJ 806 44.17 0 1002397..1002876 - 159 157960636 - Spea_0808 - AsnC family transcriptional regulator 807 45.24 0 1003095..1004396 + 433 157960637 - Spea_0809 - hypothetical protein 808 44.17 0 1005284..1006612 + 442 157960638 - Spea_0810 - serine transporter 809 32.75 -2 1007342..1008724 + 460 157960639 - Spea_0811 - hypothetical protein 810 46.62 0 1008854..1009267 + 137 157960640 - Spea_0812 - NUDIX hydrolase 811 48.27 0 1009716..1011041 - 441 157960641 - Spea_0813 - FAD dependent oxidoreductase 812 49.81 +1 1011167..1012198 - 343 157960642 - Spea_0814 - AraC family transcriptional regulator 813 48.94 +1 1012326..1012940 + 204 157960643 - Spea_0815 - lysine exporter protein LysE/YggA 814 46.21 0 1013154..1013813 - 219 157960644 - Spea_0816 - ribose-5-phosphate isomerase A 815 48.47 +1 1014119..1015063 + 314 157960645 - Spea_0817 - hypothetical protein 816 47.72 0 1015117..1016256 + 379 157960646 - Spea_0818 - endonuclease/exonuclease/phosphatase 817 41.46 -1 1016282..1016761 - 159 157960647 - Spea_0819 - MORN repeat-containing protein 818 51.19 +1 1016981..1018750 + 589 157960648 - Spea_0820 - alkaline phosphatase 819 44.56 0 1019275..1019835 + 186 157960649 - Spea_0821 - phosphoribosyltransferase 820 46.48 0 1020216..1020428 - 70 157960650 - Spea_0822 - hypothetical protein 821 48.35 0 1020859..1023528 - 889 157960651 - Spea_0823 - aminopeptidase N 822 42.90 0 1023747..1024352 - 201 157960652 - Spea_0824 - membrane lipoprotein lipid attachment site 45.18 MEAN 3.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0