IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
723	 42.99	0	899535..900539	+	334	157960553	-	Spea_0725	-	basic membrane lipoprotein
724	 45.21	0	900666..902282	+	538	157960554	-	Spea_0726	-	ABC transporter related
725	 47.30	0	902279..903409	+	376	157960555	-	Spea_0727	-	inner-membrane translocator
726	 50.62	+1	903413..904378	+	321	157960556	-	Spea_0728	-	inner-membrane translocator
727	 37.65	-2	904899..905315	+	138	157960557	-	Spea_0729	-	hypothetical protein
728	 38.67	-1	905386..905985	+	199	157960558	-	Spea_0730	-	hypothetical protein
729	 47.68	0	906550..907539	-	329	157960559	-	Spea_0731	-	fructose-1,6-bisphosphatase
730	 48.60	+1	907792..910038	+	748	157960560	-	Spea_0732	-	peptidase S9B dipeptidylpeptidase IV subunit
731	 44.07	0	910471..911187	-	238	157960561	-	Spea_0733	-	two-component response regulator
732	 43.14	0	911749..912105	+	118	157960562	-	Spea_0734	-	hypothetical protein
733	 50.69	+1	912895..914265	+	456	157960563	-	Spea_0735	-	aspartate kinase III
734	 49.14	+1	914301..915407	+	36