IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
708	 41.12	-1	873114..874025	-	303	157960538	-	Spea_0710	-	hypothetical protein
709	 45.40	0	874000..874521	-	173	157960539	-	Spea_0711	-	FMN-binding domain-containing protein
710	 46.06	0	874636..875814	-	392	157960540	-	Spea_0712	-	phosphate-selective porin O and P
711	 47.26	0	876103..878292	-	729	157960541	-	Spea_0713	-	TonB-dependent receptor
712	 45.25	0	878528..879232	+	234	157960542	-	Spea_0714	-	hypothetical protein
713	 48.50	+1	879989..881359	+	456	157960543	-	Spea_0715	-	amino acid carrier protein
714	 50.69	+1	881772..885446	+	1224	157960544	-	Spea_0716	-	hypothetical protein
715	 48.47	+1	885446..886099	+	217	157960545	-	Spea_0717	-	hypothetical protein
716	 49.80	+1	886101..887321	+	406	157960546	-	Spea_0718	-	hypothetical protein
717	 49.32	+1	888179..889435	+	418	157960547	-	Spea_0719	-	sodium:dicarboxylate symporter
718	 49.89	+1	889568..890950	-	460	157960548	-	Spea_0720	-	two component, sigma54 specific, Fis family transcriptional regulato