IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
702	 50.31	+1	864225..866834	+	869	157960532	-	Spea_0704	-	ATP-dependent helicase HrpB
703	 50.91	+1	866859..869231	+	790	157960533	-	Spea_0705	-	penicillin-binding protein 1B
704	 45.19	0	869221..869709	+	162	157960534	-	Spea_0706	-	hypothetical protein
705	 51.14	+1	869807..870991	-	394	157960535	-	Spea_0707	-	sugar efflux transporter
706	 46.58	0	871391..871843	-	150	157960536	-	Spea_0708	-	GCN5-related N-acetyltransferase
707	 46.89	0	872041..872829	-	262	157960537	-	Spea_0709	-	PepSY-associated TM helix domain-containing protein
708	 41.12	-1	873114..874025	-	303	157960538	-	Spea_0710	-	hypothetical protein
709	 45.40	0	874000..874521	-	173	157960539	-	Spea_0711	-	FMN-binding domain-containing protein
710	 46.06	0	874636..875814	-	392	157960540	-	Spea_0712	-	phosphate-selective porin O and P
711	 47.26	0	876103..878292	-	729	157960541	-	Spea_0713	-	TonB-dependent receptor
712	 45.25	0	878528..879232	+	234	157960542	-	Spea_0714	-	hypothetical protein
713