IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
697	 46.67	0	859010..859714	-	234	157960527	-	Spea_0699	-	sugar fermentation stimulation protein
698	 51.80	+2	860251..861528	+	425	157960528	-	Spea_0700	-	aminopeptidase B
699	 46.28	0	861751..862677	+	308	157960529	-	Spea_0701	-	transcriptional regulator, CadC
700	 38.46	-2	862938..863249	-	103	157960530	-	Spea_0702	-	hypothetical protein
701	 48.47	+1	863577..864098	-	173	157960531	-	Spea_0703	-	2'-5' RNA ligase
702	 50.31	+1	864225..866834	+	869	157960532	-	Spea_0704	-	ATP-dependent helicase HrpB
703	 50.91	+1	866859..869231	+	790	157960533	-	Spea_0705	-	penicillin-binding protein 1B
704	 45.19	0	869221..869709	+	162	157960534	-	Spea_0706	-	hypothetical protein
705	 51.14	+1	869807..870991	-	394	157960535	-	Spea_0707	-	sugar efflux transporter
706	 46.58	0	871391..871843	-	150	157960536	-	Spea_0708	-	GCN5-related N-acetyltransferase
707	 46.89	0	872041..872829	-	262	157960537	-	Spea_0709	-	PepSY-associated TM helix domain-containing protein
708	 41.12	-1