IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
694	 48.12	0	855987..857291	-	434	157960524	-	Spea_0696	-	poly(A) polymerase
695	 47.21	0	857471..858349	-	292	157960525	-	Spea_0697	-	glutamyl-tRNA synthetase class Ic
696	 45.05	0	858408..858851	-	147	157960526	-	Spea_0698	-	TraR/DksA family transcriptional regulator
697	 46.67	0	859010..859714	-	234	157960527	-	Spea_0699	-	sugar fermentation stimulation protein
698	 51.80	+2	860251..861528	+	425	157960528	-	Spea_0700	-	aminopeptidase B
699	 46.28	0	861751..862677	+	308	157960529	-	Spea_0701	-	transcriptional regulator, CadC
700	 38.46	-2	862938..863249	-	103	157960530	-	Spea_0702	-	hypothetical protein
701	 48.47	+1	863577..864098	-	173	157960531	-	Spea_0703	-	2'-5' RNA ligase
702	 50.31	+1	864225..866834	+	869	157960532	-	Spea_0704	-	ATP-dependent helicase HrpB
703	 50.91	+1	866859..869231	+	790	157960533	-	Spea_0705	-	penicillin-binding protein 1B
704	 45.19	0	869221..869709	+	162	157960534	-	Spea_0706	-	hypothetical protein
705	 51.14	+1	869807..870991