IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
687	 44.76	0	850577..851521	+	314	157960517	-	Spea_0689	-	ABC transporter related
688	 45.69	0	851518..852294	+	258	157960518	-	Spea_0690	-	ABC-2 type transporter
689	 42.86	0	852366..852701	-	111	157960519	-	Spea_0691	-	hypothetical protein
690	 41.62	-1	852786..853292	-	168	157960520	-	Spea_0692	-	hypothetical protein
691	 47.07	0	853642..854493	-	283	157960521	-	Spea_0693	-	pantoate--beta-alanine ligase
692	 50.69	+1	854565..855359	-	264	157960522	-	Spea_0694	-	3-methyl-2-oxobutanoate hydroxymethyltransferase
693	 50.91	+1	855493..855987	-	164	157960523	-	Spea_0695	-	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
694	 48.12	0	855987..857291	-	434	157960524	-	Spea_0696	-	poly(A) polymerase
695	 47.21	0	857471..858349	-	292	157960525	-	Spea_0697	-	glutamyl-tRNA synthetase class Ic
696	 45.05	0	858408..858851	-	147	157960526	-	Spea_0698	-	TraR/DksA family transcriptional regulator
697	 46.67	0	859010..859714	-	234	157960527	-	Spea_0699	-