IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
683	 47.00	0	846196..847512	-	438	157960513	-	Spea_0685	-	anaerobic C4-dicarboxylate transporter
684	 48.41	0	847864..849249	+	461	157960514	-	Spea_0686	-	UDP-N-acetylmuramate
685	 48.78	+1	849256..849909	+	217	157960515	-	Spea_0687	-	aromatic acid decarboxylase
686	 42.88	0	849917..850450	+	177	157960516	-	Spea_0688	-	hypoxanthine phosphoribosyltransferase
687	 44.76	0	850577..851521	+	314	157960517	-	Spea_0689	-	ABC transporter related
688	 45.69	0	851518..852294	+	258	157960518	-	Spea_0690	-	ABC-2 type transporter
689	 42.86	0	852366..852701	-	111	157960519	-	Spea_0691	-	hypothetical protein
690	 41.62	-1	852786..853292	-	168	157960520	-	Spea_0692	-	hypothetical protein
691	 47.07	0	853642..854493	-	283	157960521	-	Spea_0693	-	pantoate--beta-alanine ligase
692	 50.69	+1	854565..855359	-	264	157960522	-	Spea_0694	-	3-methyl-2-oxobutanoate hydroxymethyltransferase
693	 50.91	+1	855493..855987	-	164	157960523	-	Spea_0695	-	2-amino-4-hydroxy-6-hydroxymethyldih