version 1.0
Shewanella pealeana ATCC 700345, complete genome - 1..5174581 4241 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 676 42.86 0 839151..839675 + 174 157960506 - Spea_0678 - hypothetical protein 677 44.53 0 839735..841789 + 684 157960507 - Spea_0679 - TPR repeat-containing diguanylate cyclase and serine/threonine protein kinase 678 45.93 0 842022..843188 + 388 157960508 - Spea_0680 - porin 679 43.62 0 843229..843957 - 242 157960509 - Spea_0681 - integrase catalytic region 680 41.41 -1 844074..844457 - 127 157960510 - Spea_0682 - transposase 681 44.87 0 844599..845309 - 236 157960511 - Spea_0683 - hypothetical protein 682 46.98 0 845453..846097 - 214 157960512 - Spea_0684 - cob(II)yrinic acid a,c-diamide reductase 683 47.00 0 846196..847512 - 438 157960513 - Spea_0685 - anaerobic C4-dicarboxylate transporter 684 48.41 0 847864..849249 + 461 157960514 - Spea_0686 - UDP-N-acetylmuramate 685 48.78 +1 849256..849909 + 217 157960515 - Spea_0687 - aromatic acid decarboxylase 686 42.88 0 849917..850450 + 177 157960516 - Spea_0688 - hypoxanthine phosphoribosyltransferase 687 44.76 0 850577..851521 + 314 157960517 - Spea_0689 - ABC transporter related 688 45.69 0 851518..852294 + 258 157960518 - Spea_0690 - ABC-2 type transporter 689 42.86 0 852366..852701 - 111 157960519 - Spea_0691 - hypothetical protein 690 41.62 -1 852786..853292 - 168 157960520 - Spea_0692 - hypothetical protein 691 47.07 0 853642..854493 - 283 157960521 - Spea_0693 - pantoate--beta-alanine ligase 692 50.69 +1 854565..855359 - 264 157960522 - Spea_0694 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 693 50.91 +1 855493..855987 - 164 157960523 - Spea_0695 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 694 48.12 0 855987..857291 - 434 157960524 - Spea_0696 - poly(A) polymerase 695 47.21 0 857471..858349 - 292 157960525 - Spea_0697 - glutamyl-tRNA synthetase class Ic 696 45.05 0 858408..858851 - 147 157960526 - Spea_0698 - TraR/DksA family transcriptional regulator 697 46.67 0 859010..859714 - 234 157960527 - Spea_0699 - sugar fermentation stimulation protein 698 51.80 +2 860251..861528 + 425 157960528 - Spea_0700 - aminopeptidase B 699 46.28 0 861751..862677 + 308 157960529 - Spea_0701 - transcriptional regulator, CadC 700 38.46 -2 862938..863249 - 103 157960530 - Spea_0702 - hypothetical protein 701 48.47 +1 863577..864098 - 173 157960531 - Spea_0703 - 2'-5' RNA ligase 702 50.31 +1 864225..866834 + 869 157960532 - Spea_0704 - ATP-dependent helicase HrpB 703 50.91 +1 866859..869231 + 790 157960533 - Spea_0705 - penicillin-binding protein 1B 704 45.19 0 869221..869709 + 162 157960534 - Spea_0706 - hypothetical protein 705 51.14 +1 869807..870991 - 394 157960535 - Spea_0707 - sugar efflux transporter 706 46.58 0 871391..871843 - 150 157960536 - Spea_0708 - GCN5-related N-acetyltransferase 707 46.89 0 872041..872829 - 262 157960537 - Spea_0709 - PepSY-associated TM helix domain-containing protein 708 41.12 -1 873114..874025 - 303 157960538 - Spea_0710 - hypothetical protein 709 45.40 0 874000..874521 - 173 157960539 - Spea_0711 - FMN-binding domain-containing protein 710 46.06 0 874636..875814 - 392 157960540 - Spea_0712 - phosphate-selective porin O and P 711 47.26 0 876103..878292 - 729 157960541 - Spea_0713 - TonB-dependent receptor 712 45.25 0 878528..879232 + 234 157960542 - Spea_0714 - hypothetical protein 713 48.50 +1 879989..881359 + 456 157960543 - Spea_0715 - amino acid carrier protein 714 50.69 +1 881772..885446 + 1224 157960544 - Spea_0716 - hypothetical protein 715 48.47 +1 885446..886099 + 217 157960545 - Spea_0717 - hypothetical protein 716 49.80 +1 886101..887321 + 406 157960546 - Spea_0718 - hypothetical protein 717 49.32 +1 888179..889435 + 418 157960547 - Spea_0719 - sodium:dicarboxylate symporter 718 49.89 +1 889568..890950 - 460 157960548 - Spea_0720 - two component, sigma54 specific, Fis family transcriptional regulator 719 49.21 +1 890950..892977 - 675 157960549 - Spea_0721 - histidine kinase 720 47.07 0 893397..895187 + 596 157960550 - Spea_0722 - flavocytochrome c 721 37.42 -2 895957..896763 + 268 157960551 - Spea_0723 - alpha/beta hydrolase fold 722 39.46 -1 897237..898313 - 358 157960552 - Spea_0724 - hypothetical protein 723 42.99 0 899535..900539 + 334 157960553 - Spea_0725 - basic membrane lipoprotein 724 45.21 0 900666..902282 + 538 157960554 - Spea_0726 - ABC transporter related 725 47.30 0 902279..903409 + 376 157960555 - Spea_0727 - inner-membrane translocator 726 50.62 +1 903413..904378 + 321 157960556 - Spea_0728 - inner-membrane translocator 727 37.65 -2 904899..905315 + 138 157960557 - Spea_0729 - hypothetical protein 728 38.67 -1 905386..905985 + 199 157960558 - Spea_0730 - hypothetical protein 729 47.68 0 906550..907539 - 329 157960559 - Spea_0731 - fructose-1,6-bisphosphatase 730 48.60 +1 907792..910038 + 748 157960560 - Spea_0732 - peptidase S9B dipeptidylpeptidase IV subunit 731 44.07 0 910471..911187 - 238 157960561 - Spea_0733 - two-component response regulator 732 43.14 0 911749..912105 + 118 157960562 - Spea_0734 - hypothetical protein 733 50.69 +1 912895..914265 + 456 157960563 - Spea_0735 - aspartate kinase III 734 49.14 +1 914301..915407 + 368 157960564 - Spea_0736 - succinylglutamate desuccinylase/aspartoacylase 735 45.24 0 915685..916146 - 153 157960565 - Spea_0737 - DNA-binding transcriptional regulator AsnC 736 48.97 +1 916411..917088 - 225 157960566 - Spea_0738 - pseudouridine synthase 737 47.42 0 917202..917492 - 96 157960567 - Spea_0739 - hypothetical protein 738 47.13 0 917531..918052 - 173 157960568 - Spea_0740 - methyltransferase type 12 739 47.20 0 918057..918467 - 136 157960569 - Spea_0741 - hypothetical protein 740 47.07 0 919122..920111 + 329 157960570 - Spea_0742 - D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding 741 48.51 +1 920124..920861 + 245 157960571 - Spea_0743 - dienelactone hydrolase 742 44.57 0 920984..921517 - 177 157960572 - Spea_0744 - hypothetical protein 743 49.19 +1 921814..922557 + 247 157960573 - Spea_0745 - spermine synthase 744 46.49 0 923053..923622 + 189 157960574 - Spea_0746 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 745 48.63 +1 923915..925489 + 524 157960575 - Spea_0747 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 746 41.67 -1 925608..926735 + 375 157960576 - Spea_0748 - diguanylate cyclase 747 47.98 0 926794..926991 - 65 157960577 - Spea_0749 - hypothetical protein 748 49.16 +1 927428..928855 - 475 157960578 - Spea_0750 - hypothetical protein 749 45.80 0 929175..929591 - 138 157960579 - Spea_0751 - hypothetical protein 750 50.34 +1 930076..931251 + 391 157960580 - Spea_0752 - FAD dependent oxidoreductase 751 49.75 +1 931409..932596 + 395 157960581 - Spea_0753 - chromate transporter 752 51.24 +1 932673..936995 - 1440 157960582 - Spea_0754 - formate dehydrogenase, alpha subunit 753 48.14 0 937293..938285 - 330 157960583 - Spea_0755 - Ion transport 2 domain-containing protein 754 47.39 0 938835..939716 + 293 157960584 - Spea_0756 - peptide chain release factor 2 755 46.88 0 939729..941234 + 501 157960585 - Spea_0757 - lysyl-tRNA synthetase 756 47.02 0 941881..944400 + 839 157960586 - Spea_0758 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 757 49.16 +1 944422..945015 - 197 157960587 - Spea_0759 - pseudouridine synthase 758 46.09 0 945297..946088 + 263 157960588 - Spea_0760 - glucosamine-6-phosphate isomerase 759 44.38 0 946690..947232 + 180 157960589 - Spea_0761 - hypothetical protein 760 48.36 0 947312..947983 + 223 157960590 - Spea_0762 - nitroreductase 761 45.60 0 948023..948340 + 105 157960591 - Spea_0763 - cupin family protein 762 47.90 0 948489..950438 + 649 157960592 - Spea_0764 - peptidase U32 763 42.93 0 950515..950889 + 124 157960593 - Spea_0765 - hypothetical protein 764 51.45 +1 951008..951454 - 148 157960594 - Spea_0766 - Fe-S metabolism associated SufE 765 50.25 +1 951760..952971 - 403 157960595 - Spea_0767 - SufS subfamily cysteine desulfurase 766 48.47 +1 953172..954215 - 347 157960596 - Spea_0768 - aldo/keto reductase 767 46.92 0 954341..955282 - 313 157960597 - Spea_0769 - MarR family transcriptional regulator 768 48.52 +1 955376..955915 - 179 157960598 - Spea_0770 - NTPase 769 43.36 0 956473..957759 + 428 157960599 - Spea_0771 - aromatic amino acid permease 770 46.35 0 957934..959301 + 455 157960600 - Spea_0772 - L-serine dehydratase 1 771 47.07 0 959385..959828 - 147 157960601 - Spea_0773 - GCN5-related N-acetyltransferase 772 47.08 0 959968..960258 + 96 157960602 - Spea_0774 - hypothetical protein 773 46.11 0 960429..961727 + 432 157960603 - Spea_0775 - sodium:dicarboxylate symporter 774 43.00 0 962027..962440 - 137 157960604 - Spea_0776 - protein of unknown function DUF306 Meta and HslJ 775 42.38 0 962519..962728 + 69 157960605 - Spea_0777 - hypothetical protein 45.18 MEAN 3.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0