IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
672	 46.52	0	834980..835510	+	176	157960502	-	Spea_0674	-	hypothetical protein
673	 48.95	+1	835795..836511	-	238	157960503	-	Spea_0675	-	pseudouridine synthase
674	 41.18	-1	836524..837237	-	237	157960504	-	Spea_0676	-	hypothetical protein
675	 45.03	0	837389..838807	-	472	157960505	-	Spea_0677	-	Na+/H+ antiporter NhaC
676	 42.86	0	839151..839675	+	174	157960506	-	Spea_0678	-	hypothetical protein
677	 44.53	0	839735..841789	+	684	157960507	-	Spea_0679	-	TPR repeat-containing diguanylate cyclase and serine/threonine protein kinase
678	 45.93	0	842022..843188	+	388	157960508	-	Spea_0680	-	porin
679	 43.62	0	843229..843957	-	242	157960509	-	Spea_0681	-	integrase catalytic region
680	 41.41	-1	844074..844457	-	127	157960510	-	Spea_0682	-	transposase
681	 44.87	0	844599..845309	-	236	157960511	-	Spea_0683	-	hypothetical protein
682	 46.98	0	845453..846097	-	214	157960512	-	Spea_0684	-	cob(II)yrinic acid a,c-diamide reductase
683	 47.00	0	846196..847512	-	438