IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
656	 44.57	0	815563..816114	+	183	157960486	-	Spea_0658	-	alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
657	 47.27	0	817195..818055	-	286	157960487	-	Spea_0659	-	protein of unknown function RIO1
658	 47.76	0	818174..819670	-	498	157960488	-	Spea_0660	-	hypothetical protein
659	 45.24	0	819752..820717	-	321	157960489	-	Spea_0661	-	phospholipase A(1)
660	 49.75	+1	821127..821942	+	271	157960490	-	Spea_0662	-	uroporphyrin-III C-methyltransferase
661	 47.74	0	821969..822877	+	302	157960491	-	Spea_0663	-	sulfate adenylyltransferase subunit 2
662	 48.82	+1	822927..824366	+	479	157960492	-	Spea_0664	-	sulfate adenylyltransferase subunit 1
663	 49.68	+1	824369..826093	+	574	157960493	-	Spea_0665	-	TrkA domain-containing protein
664	 51.62	+1	826183..826800	+	205	157960494	-	Spea_0666	-	adenylyl-sulfate kinase
665	 38.29	-2	826858..827301	+	147	157960495	-	Spea_0667	-	GCN5-related N-acetyltransferase
666	 50.52	+1	827407..828267	-	286	157960496</