IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
649	 48.91	+1	806248..806523	-	91	157960479	-	Spea_0651	-	oxidoreductase
650	 49.27	+1	806523..807752	-	409	157960480	-	Spea_0652	-	NAD(P) transhydrogenase subunit alpha
651	 51.14	+1	808052..809848	+	598	157960481	-	Spea_0653	-	sulfite reductase (NADPH) flavoprotein, alpha chain
652	 49.76	+1	809939..811636	+	565	157960482	-	Spea_0654	-	sulfite reductase subunit beta
653	 48.02	0	811629..812384	+	251	157960483	-	Spea_0655	-	phosphoadenosine phosphosulfate reductase
654	 45.62	0	813065..814789	+	574	157960484	-	Spea_0656	-	hypothetical protein
655	 44.37	0	814903..815328	+	141	157960485	-	Spea_0657	-	hypothetical protein
656	 44.57	0	815563..816114	+	183	157960486	-	Spea_0658	-	alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
657	 47.27	0	817195..818055	-	286	157960487	-	Spea_0659	-	protein of unknown function RIO1
658	 47.76	0	818174..819670	-	498	157960488	-	Spea_0660	-	hypothetical protein
659	 45.24	0	819752..820717	-	321	157960489