IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
643	 48.33	0	798736..799662	-	308	157960473	-	Spea_0645	-	lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase
644	 51.48	+1	799745..801193	+	482	157960474	-	Spea_0646	-	bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase
645	 49.95	+1	801234..802154	+	306	157960475	-	Spea_0647	-	hypothetical protein
646	 48.10	0	802320..802793	+	157	157960476	-	Spea_0648	-	TetR family transcriptional regulator
647	 48.11	0	803015..804415	-	466	157960477	-	Spea_0649	-	MltA-interacting MipA family protein
648	 49.10	+1	804859..806241	-	460	157960478	-	Spea_0650	-	NAD(P)(+) transhydrogenase (AB-specific)
649	 48.91	+1	806248..806523	-	91	157960479	-	Spea_0651	-	oxidoreductase
650	 49.27	+1	806523..807752	-	409	157960480	-	Spea_0652	-	NAD(P) transhydrogenase subunit alpha
651	 51.14	+1	808052..809848	+	598	157960481	-	Spea_0653	-	sulfite reductase (NADPH) flavoprotein, alpha chain
652	 49.76	+1	809939..811636	+	565	157960482	-	Spea_0654	-	sulfite reductase subunit beta
653	 48.02	0	811629..812384	+	251