IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
637	 48.29	0	789273..790736	+	487	157960467	-	Spea_0638	-	catalase
638	 49.19	+1	791003..791557	-	184	157960468	-	Spea_0640	-	hypothetical protein
639	 48.92	+1	792238..793437	+	399	157960469	-	Spea_0641	-	aromatic amino acid permease
640	 47.47	0	793716..795872	+	718	157960470	-	Spea_0642	-	hypothetical protein
641	 33.33	-2	796579..797094	+	171	157960471	-	Spea_0643	-	hypothetical protein
642	 39.18	-1	797245..797997	+	250	157960472	-	Spea_0644	-	hypothetical protein
643	 48.33	0	798736..799662	-	308	157960473	-	Spea_0645	-	lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase
644	 51.48	+1	799745..801193	+	482	157960474	-	Spea_0646	-	bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase
645	 49.95	+1	801234..802154	+	306	157960475	-	Spea_0647	-	hypothetical protein
646	 48.10	0	802320..802793	+	157	157960476	-	Spea_0648	-	TetR family transcriptional regulator
647	 48.11	0	803015..804415	-	466	157960477	-	Spea_0649	-	MltA-in