IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
632	 43.56	0	784084..784758	+	224	157960462	-	Spea_0633	-	LuxR family transcriptional regulator
633	 47.84	0	785435..786661	+	408	157960463	-	Spea_0634	-	Na+ dependent nucleoside transporter
634	 47.12	0	786755..787465	+	236	157960464	-	Spea_0635	-	purine nucleoside phosphorylase
635	 49.54	+1	787836..788273	+	145	157960465	-	Spea_0636	-	thioesterase superfamily protein
636	 43.14	0	788554..788808	+	84	157960466	-	Spea_0637	-	hypothetical protein
637	 48.29	0	789273..790736	+	487	157960467	-	Spea_0638	-	catalase
638	 49.19	+1	791003..791557	-	184	157960468	-	Spea_0640	-	hypothetical protein
639	 48.92	+1	792238..793437	+	399	157960469	-	Spea_0641	-	aromatic amino acid permease
640	 47.47	0	793716..795872	+	718	157960470	-	Spea_0642	-	hypothetical protein
641	 33.33	-2	796579..797094	+	171	157960471	-	Spea_0643	-	hypothetical protein
642	 39.18	-1	797245..797997	+	250	157960472	-	Spea_0644	-	hypothetical protein
643	 48.33	0	798736..799662	-	308