IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
618	 45.42	0	763617..763856	-	79	157960448	-	Spea_0619	-	hypothetical protein
619	 49.30	+1	763871..764296	-	141	157960449	-	Spea_0620	-	nitrate reductase cytochrome c-type subunit (NapB)
620	 49.50	+1	764293..765189	-	298	157960450	-	Spea_0621	-	quinol dehydrogenase membrane component
621	 48.84	+1	765186..765920	-	244	157960451	-	Spea_0622	-	quinol dehydrogenase periplasmic component
622	 48.49	+1	765981..768461	-	826	157960452	-	Spea_0623	-	nitrate reductase
623	 43.12	0	768451..768726	-	91	157960453	-	Spea_0624	-	NapD family protein
624	 49.50	+1	769086..770192	-	368	157960454	-	Spea_0625	-	hypothetical protein
625	 50.67	+1	770189..772726	-	845	157960455	-	Spea_0626	-	hypothetical protein
626	 49.03	+1	772719..773387	-	222	157960456	-	Spea_0627	-	ABC transporter related
627	 48.79	+1	773739..779036	+	1765	157960457	-	Spea_0628	-	multi-sensor hybrid histidine kinase
628	 48.92	+1	779176..780195	+	339	157960458	-	Spea_0629	-	response regulator receiver mod