IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
592	 40.74	-1	727650..727784	-	44	157960422	-	Spea_0593	-	hypothetical protein
593	 43.86	0	728937..730808	+	623	157960423	-	Spea_0594	-	peptidase S9 prolyl oligopeptidase
594	 46.76	0	730899..732023	-	374	157960424	-	Spea_0595	-	peptidase M50
595	 48.83	+1	732137..733801	-	554	157960425	-	Spea_0596	-	hypothetical protein
596	 44.74	0	734320..735345	-	341	157960426	-	Spea_0597	-	rRNA (guanine-N(2)-)-methyltransferase
597	 48.65	+1	735612..736949	-	445	157960427	-	Spea_0598	-	alkaline phosphatase
598	 47.90	0	736964..737917	-	317	157960428	-	Spea_0599	-	glutathione synthetase
599	 48.36	0	738034..738765	-	243	157960429	-	Spea_0600	-	hypothetical protein
600	 41.30	-1	739231..739983	+	250	157960430	-	Spea_0601	-	deoxyribonuclease I
601	 50.44	+1	740018..740584	-	188	157960431	-	Spea_0602	-	protein of unknown function DUF335 SprT
602	 48.32	0	740862..742022	-	386	157960432	-	Spea_0603	-	hypothetical protein
603	 46.93	0	742513..743424	-	303