IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
588	 43.19	0	722699..723733	-	344	157960418	-	Spea_0589	-	porin
589	 44.13	0	724469..725533	-	354	157960419	-	Spea_0590	-	porin
590	 46.57	0	725925..726725	+	266	157960420	-	Spea_0591	-	UBA/THIF-type NAD/FAD binding protein
591	 43.69	0	726936..727553	+	205	157960421	-	Spea_0592	-	hypothetical protein
592	 40.74	-1	727650..727784	-	44	157960422	-	Spea_0593	-	hypothetical protein
593	 43.86	0	728937..730808	+	623	157960423	-	Spea_0594	-	peptidase S9 prolyl oligopeptidase
594	 46.76	0	730899..732023	-	374	157960424	-	Spea_0595	-	peptidase M50
595	 48.83	+1	732137..733801	-	554	157960425	-	Spea_0596	-	hypothetical protein
596	 44.74	0	734320..735345	-	341	157960426	-	Spea_0597	-	rRNA (guanine-N(2)-)-methyltransferase
597	 48.65	+1	735612..736949	-	445	157960427	-	Spea_0598	-	alkaline phosphatase
598	 47.90	0	736964..737917	-	317	157960428	-	Spea_0599	-	glutathione synthetase
599	 48.36	0	738034..738765	-	243