IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
582	 46.43	0	716101..717933	-	610	157960412	-	Spea_0583	-	thiol:disulfide interchange protein precursor
583	 45.06	0	717930..718253	-	107	157960413	-	Spea_0584	-	CutA1 divalent ion tolerance protein
584	 48.13	0	718573..719160	+	195	157960414	-	Spea_0585	-	FxsA cytoplasmic membrane protein
585	 47.70	0	719157..720986	-	609	157960415	-	Spea_0586	-	serine/threonine protein kinase
586	 42.98	0	721203..721544	+	113	157960416	-	Spea_0587	-	hypothetical protein
587	 47.58	0	721765..722424	+	219	157960417	-	Spea_0588	-	thiopurine S-methyltransferase
588	 43.19	0	722699..723733	-	344	157960418	-	Spea_0589	-	porin
589	 44.13	0	724469..725533	-	354	157960419	-	Spea_0590	-	porin
590	 46.57	0	725925..726725	+	266	157960420	-	Spea_0591	-	UBA/THIF-type NAD/FAD binding protein
591	 43.69	0	726936..727553	+	205	157960421	-	Spea_0592	-	hypothetical protein
592	 40.74	-1	727650..727784	-	44	157960422	-	Spea_0593	-	hypothetical protein
593	 43.86	0	728937..730808	+	623