IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
577	 47.33	0	708196..709617	-	473	157960407	-	Spea_0578	-	SSS family solute/sodium (Na+) symporter
578	 52.08	+2	709762..709905	-	47	157960408	-	Spea_0579	-	beta-galactosidase
579	 49.60	+1	709947..713180	-	1077	157960409	-	Spea_0580	-	glycoside hydrolase family protein
580	 48.49	+1	713207..714136	-	309	157960410	-	Spea_0581	-	WD40 domain-containing protein
581	 47.44	0	714205..715863	-	552	157960411	-	Spea_0582	-	sodium/hydrogen exchanger
582	 46.43	0	716101..717933	-	610	157960412	-	Spea_0583	-	thiol:disulfide interchange protein precursor
583	 45.06	0	717930..718253	-	107	157960413	-	Spea_0584	-	CutA1 divalent ion tolerance protein
584	 48.13	0	718573..719160	+	195	157960414	-	Spea_0585	-	FxsA cytoplasmic membrane protein
585	 47.70	0	719157..720986	-	609	157960415	-	Spea_0586	-	serine/threonine protein kinase
586	 42.98	0	721203..721544	+	113	157960416	-	Spea_0587	-	hypothetical protein
587	 47.58	0	721765..722424	+	219	157960417	-	Spea_0588	-	thiopurine