IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
561	 48.04	0	690542..691432	+	296	157960391	-	Spea_0562	-	5,10-methylenetetrahydrofolate reductase
562	 40.42	-1	691591..691971	+	126	157960392	-	Spea_0563	-	hypothetical protein
563	 45.61	0	692027..692311	+	94	157960393	-	Spea_0564	-	hypothetical protein
564	 42.64	0	692368..693345	+	325	157960394	-	Spea_0565	-	hypothetical protein
565	 46.42	0	693864..695735	-	623	157960395	-	Spea_0566	-	DEAD/DEAH box helicase domain-containing protein
566	 47.47	0	695953..696921	-	322	157960396	-	Spea_0567	-	peptidase M28
567	 44.64	0	696984..697319	-	111	157960397	-	Spea_0568	-	hypothetical protein
568	 48.03	0	697337..700180	-	947	157960398	-	Spea_0569	-	excinuclease ABC, A subunit
569	 48.10	0	700446..701813	+	455	157960399	-	Spea_0570	-	major facilitator transporter
570	 50.37	+1	701847..702515	+	222	157960400	-	Spea_0571	-	single-strand binding protein
571	 43.62	0	702567..703295	-	242	157960401	-	Spea_0572	-	integrase catalytic region
572	 41.41	-1	703412..703795	-