IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
539	 50.51	+1	661959..663338	+	459	157960369	-	Spea_0540	-	RND family efflux transporter MFP subunit
540	 51.75	+2	663351..666575	+	1074	157960370	-	Spea_0541	-	CzcA family heavy metal efflux protein
541	 43.79	0	666874..667179	-	101	157960371	-	Spea_0542	-	hypothetical protein
542	 49.60	+1	667460..668344	+	294	157960372	-	Spea_0543	-	penicillin-insensitive murein endopeptidase
543	 48.78	+1	668459..670744	-	761	157960373	-	Spea_0544	-	aminotransferase class V
544	 42.27	0	671034..671570	-	178	157960374	-	Spea_0545	-	hypothetical protein
545	 41.34	-1	671678..672139	-	153	157960375	-	Spea_0546	-	hypothetical protein
546	 47.08	0	672400..673461	+	353	157960376	-	Spea_0547	-	hypothetical protein
547	 46.80	0	673614..674207	+	197	157960377	-	Spea_0548	-	ATP-dependent protease La
548	 47.18	0	674518..675456	+	312	157960378	-	Spea_0549	-	pseudouridine synthase
549	 48.44	0	675719..677605	-	628	157960379	-	Spea_0550	-	hypothetical protein
550	 50.32	+1	677716..678