IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
524	 44.50	0	639013..639576	-	187	157960354	-	Spea_0525	-	redoxin domain-containing protein
525	 47.05	0	640018..641220	+	400	157960355	-	Spea_0526	-	aromatic amino acid transporter
526	 48.81	+1	643519..644862	+	447	157960356	-	Spea_0527	-	glutamate dehydrogenase
527	 40.64	-1	651937..653757	+	606	157960357	-	Spea_0528	-	hypothetical protein
528	 46.12	0	653848..655044	-	398	157960358	-	Spea_0529	-	putative plasmid transfer protein
529	 44.34	0	655536..656162	+	208	157960359	-	Spea_0530	-	hypothetical protein
530	 42.66	0	656197..656550	-	117	157960360	-	Spea_0531	-	hypothetical protein
531	 50.38	+1	656680..657342	-	220	157960361	-	Spea_0532	-	short-chain dehydrogenase/reductase SDR
532	 49.23	+1	657397..657849	-	150	157960362	-	Spea_0533	-	acetyl-CoA carboxylase, biotin carboxyl carrier protein
533	 48.99	+1	657864..658310	-	148	157960363	-	Spea_0534	-	3-dehydroquinate dehydratase, type II
534	 48.94	+1	658483..658905	-	140	157960364	-	Spea_0535	-	hypothet