IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
515	 50.15	+1	630384..631358	+	324	157960345	-	Spea_0516	-	ribose ABC transporter permease protein
516	 49.67	+1	631445..632344	+	299	157960346	-	Spea_0517	-	D-ribose transporter subunit RbsB
517	 48.05	0	632466..633389	+	307	157960347	-	Spea_0518	-	ribokinase
518	 50.85	+1	633517..634521	+	334	157960348	-	Spea_0519	-	LacI family transcription regulator
519	 45.99	0	634615..635325	-	236	157960349	-	Spea_0520	-	FMN reductase
520	 49.66	+1	635435..636916	-	493	157960350	-	Spea_0521	-	UbiD family decarboxylase
521	 48.25	0	637137..637706	+	189	157960351	-	Spea_0522	-	hypothetical protein
522	 42.13	0	637794..638384	+	196	157960352	-	Spea_0523	-	hypothetical protein
523	 42.86	0	638457..638981	-	174	157960353	-	Spea_0524	-	GCN5-related N-acetyltransferase
524	 44.50	0	639013..639576	-	187	157960354	-	Spea_0525	-	redoxin domain-containing protein
525	 47.05	0	640018..641220	+	400	157960355	-	Spea_0526	-	aromatic amino acid transporter
526	 48.81	+1	643519..644862