IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
508	 49.28	+1	622713..623201	+	162	157960338	-	Spea_0509	-	NosL family protein
509	 46.59	0	623257..624576	+	439	157960339	-	Spea_0510	-	periplasmic copper-binding
510	 47.63	0	624672..625580	+	302	157960340	-	Spea_0511	-	ABC transporter related
511	 42.30	0	625582..626406	+	274	157960341	-	Spea_0512	-	ABC-2 type transporter
512	 43.15	0	626672..627955	+	427	157960342	-	Spea_0513	-	transcriptional regulator, CadC
513	 48.57	+1	628444..628863	+	139	157960343	-	Spea_0514	-	D-ribose pyranase
514	 49.60	+1	628882..630387	+	501	157960344	-	Spea_0515	-	D-ribose transporter ATP binding protein
515	 50.15	+1	630384..631358	+	324	157960345	-	Spea_0516	-	ribose ABC transporter permease protein
516	 49.67	+1	631445..632344	+	299	157960346	-	Spea_0517	-	D-ribose transporter subunit RbsB
517	 48.05	0	632466..633389	+	307	157960347	-	Spea_0518	-	ribokinase
518	 50.85	+1	633517..634521	+	334	157960348	-	Spea_0519	-	LacI family transcription regulator
519	 45.99	0	634615..63