version 1.0
Shewanella pealeana ATCC 700345, complete genome - 1..5174581 4241 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 499 47.27 0 614099..614428 + 109 157960329 - Spea_0500 - ferredoxin 500 42.17 0 614605..615147 + 180 157960330 - Spea_0501 - RNA polymerase sigma factor SigZ 501 41.46 -1 615214..615927 + 237 157960331 - Spea_0502 - glutathione S-transferase domain-containing protein 502 44.95 0 616645..618675 + 676 157960332 - Spea_0503 - cytochrome c, putative 503 45.75 0 618715..619173 + 152 157960333 - Spea_0504 - rhodanese domain-containing protein 504 44.66 0 619233..620018 + 261 157960334 - Spea_0505 - peptidylprolyl isomerase FKBP-type 505 41.04 -1 620104..620817 + 237 157960335 - Spea_0506 - TPR repeat-containing protein 506 46.13 0 620880..621590 + 236 157960336 - Spea_0507 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 507 44.62 0 621593..622540 + 315 157960337 - Spea_0508 - polysulphide reductase NrfD 508 49.28 +1 622713..623201 + 162 157960338 - Spea_0509 - NosL family protein 509 46.59 0 623257..624576 + 439 157960339 - Spea_0510 - periplasmic copper-binding 510 47.63 0 624672..625580 + 302 157960340 - Spea_0511 - ABC transporter related 511 42.30 0 625582..626406 + 274 157960341 - Spea_0512 - ABC-2 type transporter 512 43.15 0 626672..627955 + 427 157960342 - Spea_0513 - transcriptional regulator, CadC 513 48.57 +1 628444..628863 + 139 157960343 - Spea_0514 - D-ribose pyranase 514 49.60 +1 628882..630387 + 501 157960344 - Spea_0515 - D-ribose transporter ATP binding protein 515 50.15 +1 630384..631358 + 324 157960345 - Spea_0516 - ribose ABC transporter permease protein 516 49.67 +1 631445..632344 + 299 157960346 - Spea_0517 - D-ribose transporter subunit RbsB 517 48.05 0 632466..633389 + 307 157960347 - Spea_0518 - ribokinase 518 50.85 +1 633517..634521 + 334 157960348 - Spea_0519 - LacI family transcription regulator 519 45.99 0 634615..635325 - 236 157960349 - Spea_0520 - FMN reductase 520 49.66 +1 635435..636916 - 493 157960350 - Spea_0521 - UbiD family decarboxylase 521 48.25 0 637137..637706 + 189 157960351 - Spea_0522 - hypothetical protein 522 42.13 0 637794..638384 + 196 157960352 - Spea_0523 - hypothetical protein 523 42.86 0 638457..638981 - 174 157960353 - Spea_0524 - GCN5-related N-acetyltransferase 524 44.50 0 639013..639576 - 187 157960354 - Spea_0525 - redoxin domain-containing protein 525 47.05 0 640018..641220 + 400 157960355 - Spea_0526 - aromatic amino acid transporter 526 48.81 +1 643519..644862 + 447 157960356 - Spea_0527 - glutamate dehydrogenase 527 40.64 -1 651937..653757 + 606 157960357 - Spea_0528 - hypothetical protein 528 46.12 0 653848..655044 - 398 157960358 - Spea_0529 - putative plasmid transfer protein 529 44.34 0 655536..656162 + 208 157960359 - Spea_0530 - hypothetical protein 530 42.66 0 656197..656550 - 117 157960360 - Spea_0531 - hypothetical protein 531 50.38 +1 656680..657342 - 220 157960361 - Spea_0532 - short-chain dehydrogenase/reductase SDR 532 49.23 +1 657397..657849 - 150 157960362 - Spea_0533 - acetyl-CoA carboxylase, biotin carboxyl carrier protein 533 48.99 +1 657864..658310 - 148 157960363 - Spea_0534 - 3-dehydroquinate dehydratase, type II 534 48.94 +1 658483..658905 - 140 157960364 - Spea_0535 - hypothetical protein 535 49.73 +1 659098..659469 + 123 157960365 - Spea_0536 - hypothetical protein 536 46.33 0 659541..659717 + 58 157960366 - Spea_0537 - hypothetical protein 537 47.26 0 659872..660309 + 145 157960367 - Spea_0538 - hypothetical protein 538 49.52 +1 660602..661948 + 448 157960368 - Spea_0539 - outer membrane efflux family protein, putative 539 50.51 +1 661959..663338 + 459 157960369 - Spea_0540 - RND family efflux transporter MFP subunit 540 51.75 +2 663351..666575 + 1074 157960370 - Spea_0541 - CzcA family heavy metal efflux protein 541 43.79 0 666874..667179 - 101 157960371 - Spea_0542 - hypothetical protein 542 49.60 +1 667460..668344 + 294 157960372 - Spea_0543 - penicillin-insensitive murein endopeptidase 543 48.78 +1 668459..670744 - 761 157960373 - Spea_0544 - aminotransferase class V 544 42.27 0 671034..671570 - 178 157960374 - Spea_0545 - hypothetical protein 545 41.34 -1 671678..672139 - 153 157960375 - Spea_0546 - hypothetical protein 546 47.08 0 672400..673461 + 353 157960376 - Spea_0547 - hypothetical protein 547 46.80 0 673614..674207 + 197 157960377 - Spea_0548 - ATP-dependent protease La 548 47.18 0 674518..675456 + 312 157960378 - Spea_0549 - pseudouridine synthase 549 48.44 0 675719..677605 - 628 157960379 - Spea_0550 - hypothetical protein 550 50.32 +1 677716..678639 + 307 157960380 - Spea_0551 - dTDP-4-dehydrorhamnose reductase 551 50.42 +1 678668..679990 + 440 157960381 - Spea_0552 - histidine kinase 552 46.30 0 679983..680522 + 179 157960382 - Spea_0553 - two component Fis family transcriptional regulator 553 47.78 0 680705..681853 - 382 157960383 - Spea_0554 - sulphate transporter 554 47.50 0 682132..682851 - 239 157960384 - Spea_0555 - short-chain dehydrogenase/reductase SDR 555 45.14 0 682998..683912 + 304 157960385 - Spea_0556 - LysR family transcriptional regulator 556 46.90 0 684117..685310 + 397 157960386 - Spea_0557 - putative plasmid transfer protein 557 47.27 0 685317..686048 - 243 157960387 - Spea_0558 - hypothetical protein 558 44.13 0 686241..686555 - 104 157960388 - Spea_0559 - transcriptional repressor protein MetJ 559 49.27 +1 686767..687927 + 386 157960389 - Spea_0560 - O-succinylhomoserine (thiol)-lyase 560 48.87 +1 687943..690336 + 797 157960390 - Spea_0561 - bifunctional aspartate kinase II/homoserine dehydrogenase II 561 48.04 0 690542..691432 + 296 157960391 - Spea_0562 - 5,10-methylenetetrahydrofolate reductase 562 40.42 -1 691591..691971 + 126 157960392 - Spea_0563 - hypothetical protein 563 45.61 0 692027..692311 + 94 157960393 - Spea_0564 - hypothetical protein 564 42.64 0 692368..693345 + 325 157960394 - Spea_0565 - hypothetical protein 565 46.42 0 693864..695735 - 623 157960395 - Spea_0566 - DEAD/DEAH box helicase domain-containing protein 566 47.47 0 695953..696921 - 322 157960396 - Spea_0567 - peptidase M28 567 44.64 0 696984..697319 - 111 157960397 - Spea_0568 - hypothetical protein 568 48.03 0 697337..700180 - 947 157960398 - Spea_0569 - excinuclease ABC, A subunit 569 48.10 0 700446..701813 + 455 157960399 - Spea_0570 - major facilitator transporter 570 50.37 +1 701847..702515 + 222 157960400 - Spea_0571 - single-strand binding protein 571 43.62 0 702567..703295 - 242 157960401 - Spea_0572 - integrase catalytic region 572 41.41 -1 703412..703795 - 127 157960402 - Spea_0573 - transposase 573 43.44 0 703914..704645 - 243 157960403 - Spea_0574 - putative cation efflux protein 574 44.44 0 705180..705593 + 137 157960404 - Spea_0575 - hypothetical protein 575 46.80 0 705652..706683 - 343 157960405 - Spea_0576 - aldose 1-epimerase 576 50.82 +1 706720..707874 - 384 157960406 - Spea_0577 - galactokinase 577 47.33 0 708196..709617 - 473 157960407 - Spea_0578 - SSS family solute/sodium (Na+) symporter 578 52.08 +2 709762..709905 - 47 157960408 - Spea_0579 - beta-galactosidase 579 49.60 +1 709947..713180 - 1077 157960409 - Spea_0580 - glycoside hydrolase family protein 580 48.49 +1 713207..714136 - 309 157960410 - Spea_0581 - WD40 domain-containing protein 581 47.44 0 714205..715863 - 552 157960411 - Spea_0582 - sodium/hydrogen exchanger 582 46.43 0 716101..717933 - 610 157960412 - Spea_0583 - thiol:disulfide interchange protein precursor 583 45.06 0 717930..718253 - 107 157960413 - Spea_0584 - CutA1 divalent ion tolerance protein 584 48.13 0 718573..719160 + 195 157960414 - Spea_0585 - FxsA cytoplasmic membrane protein 585 47.70 0 719157..720986 - 609 157960415 - Spea_0586 - serine/threonine protein kinase 586 42.98 0 721203..721544 + 113 157960416 - Spea_0587 - hypothetical protein 587 47.58 0 721765..722424 + 219 157960417 - Spea_0588 - thiopurine S-methyltransferase 588 43.19 0 722699..723733 - 344 157960418 - Spea_0589 - porin 589 44.13 0 724469..725533 - 354 157960419 - Spea_0590 - porin 590 46.57 0 725925..726725 + 266 157960420 - Spea_0591 - UBA/THIF-type NAD/FAD binding protein 591 43.69 0 726936..727553 + 205 157960421 - Spea_0592 - hypothetical protein 592 40.74 -1 727650..727784 - 44 157960422 - Spea_0593 - hypothetical protein 593 43.86 0 728937..730808 + 623 157960423 - Spea_0594 - peptidase S9 prolyl oligopeptidase 594 46.76 0 730899..732023 - 374 157960424 - Spea_0595 - peptidase M50 595 48.83 +1 732137..733801 - 554 157960425 - Spea_0596 - hypothetical protein 596 44.74 0 734320..735345 - 341 157960426 - Spea_0597 - rRNA (guanine-N(2)-)-methyltransferase 597 48.65 +1 735612..736949 - 445 157960427 - Spea_0598 - alkaline phosphatase 598 47.90 0 736964..737917 - 317 157960428 - Spea_0599 - glutathione synthetase 45.18 MEAN 3.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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